RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 MAP2K2P36507 400 aa16.96■□□□□ 0.31
CAPN1-228ENST00000534373 CHRNDQ07001 517 aa16.96■□□□□ 0.31
CAPN1-228ENST00000534373 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
CAPN1-228ENST00000534373 STRIP1Q5VSL9 837 aa16.96■□□□□ 0.31
CAPN1-228ENST00000534373 SLC4A10Q6U841 1118 aa16.96■□□□□ 0.31
CAPN1-228ENST00000534373 CAPNS2Q96L46 248 aa16.96■□□□□ 0.31
CAPN1-228ENST00000534373 PTPRCP08575 1304 aa16.96■□□□□ 0.3
CAPN1-228ENST00000534373 MYO3BQ8WXR4 1341 aa16.96■□□□□ 0.3
CAPN1-228ENST00000534373 CTCFP49711 727 aaPredicted RBP16.95■□□□□ 0.3
CAPN1-228ENST00000534373 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
CAPN1-228ENST00000534373 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
CAPN1-228ENST00000534373 MRPL50Q8N5N7 158 aaKnown RBP16.95■□□□□ 0.3
CAPN1-228ENST00000534373 PRDM10Q9NQV6 1147 aa16.95■□□□□ 0.3
CAPN1-228ENST00000534373 FOXN1O15353 648 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 KCNJ4P48050 445 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 DACT2Q5SW24 774 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 CYP4F22Q6NT55 531 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 PAXIP1Q6ZW49 1069 aaPredicted RBP16.94■□□□□ 0.3
CAPN1-228ENST00000534373 TXNRD3Q86VQ6 643 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 SULF1Q8IWU6 871 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 MYOZ2Q9NPC6 264 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 UTYO14607 1347 aa16.94■□□□□ 0.3
CAPN1-228ENST00000534373 PSME4Q14997 1843 aa16.93■□□□□ 0.3
CAPN1-228ENST00000534373 SCARF1Q14162 830 aa16.93■□□□□ 0.3
CAPN1-228ENST00000534373 TTLL5Q6EMB2 1281 aa16.93■□□□□ 0.3
CAPN1-228ENST00000534373 TNS4Q8IZW8 715 aa16.93■□□□□ 0.3
CAPN1-228ENST00000534373 ZNF408Q9H9D4 720 aa16.93■□□□□ 0.3
CAPN1-228ENST00000534373 PITPNM2Q9BZ72 1349 aa16.93■□□□□ 0.3
CAPN1-228ENST00000534373 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
CAPN1-228ENST00000534373 ALDH1L2Q3SY69 923 aa16.92■□□□□ 0.3
CAPN1-228ENST00000534373 TAF7LQ5H9L4 462 aa16.92■□□□□ 0.3
CAPN1-228ENST00000534373 EPHA10Q5JZY3 1008 aa16.92■□□□□ 0.3
CAPN1-228ENST00000534373 LDHAL6AQ6ZMR3 332 aa16.92■□□□□ 0.3
CAPN1-228ENST00000534373 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
CAPN1-228ENST00000534373 C2orf69Q8N8R5 385 aa16.92■□□□□ 0.3
CAPN1-228ENST00000534373 GGA3Q9NZ52 723 aa16.92■□□□□ 0.3
CAPN1-228ENST00000534373 SPEF2Q9C093 1822 aa16.91■□□□□ 0.3
CAPN1-228ENST00000534373 SSH1Q8WYL5 1049 aa16.91■□□□□ 0.3
CAPN1-228ENST00000534373 BEGAINQ9BUH8 593 aa16.91■□□□□ 0.3
CAPN1-228ENST00000534373 POLR2AP24928 1970 aaKnown RBP16.9■□□□□ 0.3
CAPN1-228ENST00000534373 TAF5LO75529 589 aa16.9■□□□□ 0.3
CAPN1-228ENST00000534373 NBPF7P0C2Y1 421 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-228ENST00000534373 ANGEL2Q5VTE6 544 aaKnown RBP16.9■□□□□ 0.3
CAPN1-228ENST00000534373 GBA2Q9HCG7 927 aaPredicted RBP16.9■□□□□ 0.3
CAPN1-228ENST00000534373 CD209Q9NNX6 404 aa16.9■□□□□ 0.3
CAPN1-228ENST00000534373 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
CAPN1-228ENST00000534373 ADM5C9JUS6 153 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 KLRK1P26718 216 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 HUNKP57058 714 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 ZNF804AQ7Z570 1209 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 HELBQ8NG08 1087 aaPredicted RBP16.89■□□□□ 0.29
CAPN1-228ENST00000534373 KAZALD1Q96I82 304 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 SUCLG2Q96I99 432 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 CNNM1Q9NRU3 951 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 HDAC9Q9UKV0 1011 aa16.89■□□□□ 0.29
CAPN1-228ENST00000534373 THSD7BQ9C0I4 1608 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 CA12O43570 354 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 IL1R1P14778 569 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 FKBP1AP62942 108 aaKnown RBP16.88■□□□□ 0.29
CAPN1-228ENST00000534373 FKBP1BP68106 108 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 GTF2IP78347 998 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 NOGQ13253 232 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 GRM1Q13255 1194 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 RABL6Q3YEC7 729 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-228ENST00000534373 FBXW7Q969H0 707 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 CCDC102AQ96A19 550 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 CDCA7LQ96GN5 454 aa16.88■□□□□ 0.29
CAPN1-228ENST00000534373 ZNF594Q96JF6 807 aaPredicted RBP16.88■□□□□ 0.29
CAPN1-228ENST00000534373 WNT10BO00744 389 aa16.87■□□□□ 0.29
CAPN1-228ENST00000534373 LBX1P52954 281 aa16.87■□□□□ 0.29
CAPN1-228ENST00000534373 BRPF1P55201 1214 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-228ENST00000534373 UBE4AQ14139 1066 aa16.87■□□□□ 0.29
CAPN1-228ENST00000534373 RGMBQ6NW40 437 aa16.87■□□□□ 0.29
CAPN1-228ENST00000534373 DLK2Q6UY11 383 aa16.87■□□□□ 0.29
CAPN1-228ENST00000534373 CDCA5Q96FF9 252 aa16.87■□□□□ 0.29
CAPN1-228ENST00000534373 MXD3Q9BW11 206 aa16.87■□□□□ 0.29
CAPN1-228ENST00000534373 ASTN2O75129 1339 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-228ENST00000534373 SNAP23O00161 211 aa16.86■□□□□ 0.29
CAPN1-228ENST00000534373 AOC2O75106 756 aa16.86■□□□□ 0.29
CAPN1-228ENST00000534373 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
CAPN1-228ENST00000534373 NBPF9Q3BBW0 867 aa16.86■□□□□ 0.29
CAPN1-228ENST00000534373 USP44Q9H0E7 712 aa16.86■□□□□ 0.29
CAPN1-228ENST00000534373 BICC1Q9H694 974 aaKnown RBP16.86■□□□□ 0.29
CAPN1-228ENST00000534373 RIPOR2Q9Y4F9 1068 aa16.86■□□□□ 0.29
CAPN1-228ENST00000534373 PLIN1O60240 522 aa16.85■□□□□ 0.29
CAPN1-228ENST00000534373 SASH1O94885 1247 aa16.85■□□□□ 0.29
CAPN1-228ENST00000534373 SMC4Q9NTJ3 1288 aa16.85■□□□□ 0.29
CAPN1-228ENST00000534373 MROH5Q6ZUA9 1318 aa16.85■□□□□ 0.29
CAPN1-228ENST00000534373 KIAA0825Q8IV33 1275 aa16.84■□□□□ 0.29
CAPN1-228ENST00000534373 MTMR14Q8NCE2 650 aa16.84■□□□□ 0.29
CAPN1-228ENST00000534373 ZBED3Q96IU2 234 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-228ENST00000534373 ZNF646O15015 1829 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-228ENST00000534373 ZNF157P51786 506 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-228ENST00000534373 ANKRD44Q8N8A2 993 aa16.83■□□□□ 0.28
CAPN1-228ENST00000534373 HDAC5Q9UQL6 1122 aa16.83■□□□□ 0.28
CAPN1-228ENST00000534373 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
CAPN1-228ENST00000534373 FAM155AB1AL88 458 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-228ENST00000534373 HIBADHP31937 336 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms