RNA–Protein interactions for RNA: ENST00000533361.1

SIPA1-208, Transcript of signal-induced proliferation-associated 1, human

TSL 4

Gene SIPA1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1-208	ENST00000533361	DNAJC5G	Q8N7S2	189 aa		27.81	■■■□□ 2.04
SIPA1-208	ENST00000533361	FBXW7	Q969H0	707 aa		27.81	■■■□□ 2.04
SIPA1-208	ENST00000533361	RIPOR2	Q9Y4F9	1068 aa		27.81	■■■□□ 2.04
SIPA1-208	ENST00000533361	GNAI2	P04899	355 aa		27.8	■■■□□ 2.04
SIPA1-208	ENST00000533361	LDHD	Q86WU2	507 aa		27.8	■■■□□ 2.04
SIPA1-208	ENST00000533361	MS4A1	P11836	297 aa		27.79	■■■□□ 2.04
SIPA1-208	ENST00000533361	RLBP1	P12271	317 aa		27.79	■■■□□ 2.04
SIPA1-208	ENST00000533361	RFX5	P48382	616 aa	Predicted RBP	27.79	■■■□□ 2.04
SIPA1-208	ENST00000533361	CNOT7	Q9UIV1	285 aa	Known RBP	27.79	■■■□□ 2.04
SIPA1-208	ENST00000533361	USP17L3	A6NCW0	530 aa		27.78	■■■□□ 2.04
SIPA1-208	ENST00000533361	USP17L4	A6NCW7	530 aa		27.78	■■■□□ 2.04
SIPA1-208	ENST00000533361		H7C1D1	291 aa		27.78	■■■□□ 2.04
SIPA1-208	ENST00000533361	PTPN12	Q05209	780 aa	Known RBP	27.78	■■■□□ 2.04
SIPA1-208	ENST00000533361	USP17L1	Q7RTZ2	530 aa		27.78	■■■□□ 2.04
SIPA1-208	ENST00000533361	ADARB2	Q9NS39	739 aa	Known RBP	27.78	■■■□□ 2.04
SIPA1-208	ENST00000533361	EYA2	O00167	538 aa		27.77	■■■□□ 2.04
SIPA1-208	ENST00000533361	VIL1	P09327	827 aa	Known RBP	27.77	■■■□□ 2.04
SIPA1-208	ENST00000533361	UBE4A	Q14139	1066 aa		27.77	■■■□□ 2.04
SIPA1-208	ENST00000533361	PANK1	Q8TE04	598 aa		27.77	■■■□□ 2.04
SIPA1-208	ENST00000533361	SIL1	Q9H173	461 aa		27.77	■■■□□ 2.04
SIPA1-208	ENST00000533361	RPS12	P25398	132 aa	Known RBP	27.76	■■■□□ 2.03
SIPA1-208	ENST00000533361	USP50	Q70EL3	339 aa	Predicted RBP	27.76	■■■□□ 2.03
SIPA1-208	ENST00000533361	ZNF804A	Q7Z570	1209 aa		27.76	■■■□□ 2.03
SIPA1-208	ENST00000533361	MICALL2	Q8IY33	904 aa		27.76	■■■□□ 2.03
SIPA1-208	ENST00000533361	DPF2	Q92785	391 aa		27.76	■■■□□ 2.03
SIPA1-208	ENST00000533361	SRGAP3	O43295	1099 aa		27.75	■■■□□ 2.03
SIPA1-208	ENST00000533361	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.75	■■■□□ 2.03
SIPA1-208	ENST00000533361	C15orf52	Q6ZUT6	534 aa	Known RBP	27.75	■■■□□ 2.03
SIPA1-208	ENST00000533361	CD209	Q9NNX6	404 aa		27.75	■■■□□ 2.03
SIPA1-208	ENST00000533361	SCN9A	Q15858	1988 aa		27.75	■■■□□ 2.03
SIPA1-208	ENST00000533361		A0A1B0GUL6	1792 aa		27.74	■■■□□ 2.03
SIPA1-208	ENST00000533361	SHTN1	A0MZ66	631 aa		27.74	■■■□□ 2.03
SIPA1-208	ENST00000533361	PA2G4	Q9UQ80	394 aa	Known RBP	27.74	■■■□□ 2.03
SIPA1-208	ENST00000533361	PDE8B	O95263	885 aa		27.73	■■■□□ 2.03
SIPA1-208	ENST00000533361	RBM26	Q5T8P6	1007 aa	Known RBP	27.72	■■■□□ 2.03
SIPA1-208	ENST00000533361	TTLL5	Q6EMB2	1281 aa		27.72	■■■□□ 2.03
SIPA1-208	ENST00000533361	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	27.72	■■■□□ 2.03
SIPA1-208	ENST00000533361	AGBL3	Q8NEM8	1001 aa		27.72	■■■□□ 2.03
SIPA1-208	ENST00000533361	IRS2	Q9Y4H2	1338 aa		27.71	■■■□□ 2.03
SIPA1-208	ENST00000533361	GTF2I	P78347	998 aa		27.71	■■■□□ 2.03
SIPA1-208	ENST00000533361	STRIP1	Q5VSL9	837 aa		27.71	■■■□□ 2.03
SIPA1-208	ENST00000533361	MAP1S	Q66K74	1059 aa	Predicted RBP	27.71	■■■□□ 2.03
SIPA1-208	ENST00000533361	FBXO3	Q9UK99	471 aa		27.71	■■■□□ 2.03
SIPA1-208	ENST00000533361	ZBTB7B	O15156	539 aa	Predicted RBP	27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	CIAO1	O76071	339 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	GYG1	P46976	350 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	MTX1	Q13505	466 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	ATG9A	Q7Z3C6	839 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	SAMD7	Q7Z3H4	446 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	MXD3	Q9BW11	206 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	C1orf115	Q9H7X2	142 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	COPRS	Q9NQ92	184 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	CEP126	Q9P2H0	1117 aa		27.7	■■■□□ 2.02
SIPA1-208	ENST00000533361	HIBADH	P31937	336 aa	Known RBP	27.69	■■■□□ 2.02
SIPA1-208	ENST00000533361	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.69	■■■□□ 2.02
SIPA1-208	ENST00000533361	DACT2	Q5SW24	774 aa		27.69	■■■□□ 2.02
SIPA1-208	ENST00000533361	VPS37D	Q86XT2	251 aa		27.69	■■■□□ 2.02
SIPA1-208	ENST00000533361	VGLL2	Q8N8G2	317 aa		27.69	■■■□□ 2.02
SIPA1-208	ENST00000533361	TRPM4	Q8TD43	1214 aa		27.69	■■■□□ 2.02
SIPA1-208	ENST00000533361	IFIT1	P09914	478 aa	Known RBP	27.68	■■■□□ 2.02
SIPA1-208	ENST00000533361	IL15	P40933	162 aa	Predicted RBP	27.68	■■■□□ 2.02
SIPA1-208	ENST00000533361	PUM3	Q15397	648 aa	Known RBP	27.68	■■■□□ 2.02
SIPA1-208	ENST00000533361	CNTROB	Q8N137	903 aa		27.68	■■■□□ 2.02
SIPA1-208	ENST00000533361	USP17L8	P0C7I0	530 aa		27.67	■■■□□ 2.02
SIPA1-208	ENST00000533361	IL1R1	P14778	569 aa		27.67	■■■□□ 2.02
SIPA1-208	ENST00000533361	CAVIN4	Q5BKX8	364 aa		27.67	■■■□□ 2.02
SIPA1-208	ENST00000533361	FAM84B	Q96KN1	310 aa	Predicted RBP	27.67	■■■□□ 2.02
SIPA1-208	ENST00000533361	COG6	Q9Y2V7	657 aa		27.67	■■■□□ 2.02
SIPA1-208	ENST00000533361	PNMA6E	A0A0J9YXQ4	647 aa		27.66	■■■□□ 2.02
SIPA1-208	ENST00000533361	SLC5A1	P13866	664 aa		27.66	■■■□□ 2.02
SIPA1-208	ENST00000533361	HIRA	P54198	1017 aa	Predicted RBP	27.66	■■■□□ 2.02
SIPA1-208	ENST00000533361	HTRA3	P83110	453 aa		27.66	■■■□□ 2.02
SIPA1-208	ENST00000533361	PSME4	Q14997	1843 aa		27.66	■■■□□ 2.02
SIPA1-208	ENST00000533361	MYO3B	Q8WXR4	1341 aa		27.66	■■■□□ 2.02
SIPA1-208	ENST00000533361	MVP	Q14764	893 aa	Known RBP	27.65	■■■□□ 2.02
SIPA1-208	ENST00000533361	GML	Q99445	158 aa		27.65	■■■□□ 2.02
SIPA1-208	ENST00000533361	JAG2	Q9Y219	1238 aa		27.65	■■■□□ 2.02
SIPA1-208	ENST00000533361	ADAMTSL1	Q8N6G6	1762 aa		27.64	■■■□□ 2.02
SIPA1-208	ENST00000533361	FRAT2	O75474	233 aa	Predicted RBP	27.64	■■■□□ 2.02
SIPA1-208	ENST00000533361	ATP8B2	P98198	1209 aa		27.64	■■■□□ 2.02
SIPA1-208	ENST00000533361	KIF4B	Q2VIQ3	1234 aa		27.64	■■■□□ 2.02
SIPA1-208	ENST00000533361	OGFOD1	Q8N543	542 aa		27.64	■■■□□ 2.02
SIPA1-208	ENST00000533361	LPIN2	Q92539	896 aa		27.64	■■■□□ 2.02
SIPA1-208	ENST00000533361	ITGBL1	O95965	494 aa	Predicted RBP	27.63	■■■□□ 2.01
SIPA1-208	ENST00000533361	FGFR2	P21802	821 aa		27.63	■■■□□ 2.01
SIPA1-208	ENST00000533361	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.63	■■■□□ 2.01
SIPA1-208	ENST00000533361	ATP2B3	Q16720	1220 aa		27.63	■■■□□ 2.01
SIPA1-208	ENST00000533361	TDRD7	Q8NHU6	1098 aa	Known RBP	27.63	■■■□□ 2.01
SIPA1-208	ENST00000533361	DDX19B	Q9UMR2	479 aa		27.63	■■■□□ 2.01
SIPA1-208	ENST00000533361	SASH1	O94885	1247 aa		27.62	■■■□□ 2.01
SIPA1-208	ENST00000533361	EGFR	P00533	1210 aa		27.62	■■■□□ 2.01
SIPA1-208	ENST00000533361	FBXO33	Q7Z6M2	555 aa		27.62	■■■□□ 2.01
SIPA1-208	ENST00000533361	ZC3H15	Q8WU90	426 aa	Known RBP	27.62	■■■□□ 2.01
SIPA1-208	ENST00000533361	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	27.62	■■■□□ 2.01
SIPA1-208	ENST00000533361	ZNF609	O15014	1411 aa		27.61	■■■□□ 2.01
SIPA1-208	ENST00000533361	BCAM	P50895	628 aa		27.61	■■■□□ 2.01
SIPA1-208	ENST00000533361	ZNF280A	P59817	542 aa	Predicted RBP	27.61	■■■□□ 2.01
SIPA1-208	ENST00000533361	KIAA0825	Q8IV33	1275 aa		27.61	■■■□□ 2.01
SIPA1-208	ENST00000533361	KLRG1	Q96E93	195 aa		27.61	■■■□□ 2.01
SIPA1-208	ENST00000533361	MYOZ2	Q9NPC6	264 aa		27.61	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms