RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 GPSM2P81274 684 aa17.58■□□□□ 0.4
COL16A1-217ENST00000532877 C16orf71Q8IYS4 520 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-217ENST00000532877 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-217ENST00000532877 ANKIB1Q9P2G1 1089 aa17.58■□□□□ 0.4
COL16A1-217ENST00000532877 A0A1B0GUL7 405 aa17.57■□□□□ 0.4
COL16A1-217ENST00000532877 SNAP23O00161 211 aa17.57■□□□□ 0.4
COL16A1-217ENST00000532877 CAPN15O75808 1086 aa17.57■□□□□ 0.4
COL16A1-217ENST00000532877 DALRD3Q5D0E6 543 aaKnown RBP17.57■□□□□ 0.4
COL16A1-217ENST00000532877 TLR7Q9NYK1 1049 aaKnown RBP17.57■□□□□ 0.4
COL16A1-217ENST00000532877 PODXL2Q9NZ53 605 aa17.57■□□□□ 0.4
COL16A1-217ENST00000532877 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-217ENST00000532877 SALL3Q9BXA9 1300 aa17.56■□□□□ 0.4
COL16A1-217ENST00000532877 C21orf2O43822 256 aa17.56■□□□□ 0.4
COL16A1-217ENST00000532877 IFIT2P09913 472 aaKnown RBP17.56■□□□□ 0.4
COL16A1-217ENST00000532877 TIMM10P62072 90 aa17.56■□□□□ 0.4
COL16A1-217ENST00000532877 UBE4AQ14139 1066 aa17.56■□□□□ 0.4
COL16A1-217ENST00000532877 LPIN2Q92539 896 aa17.56■□□□□ 0.4
COL16A1-217ENST00000532877 CCDC8Q9H0W5 538 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-217ENST00000532877 TMX4Q9H1E5 349 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-217ENST00000532877 DBNLQ9UJU6 430 aaKnown RBP17.56■□□□□ 0.4
COL16A1-217ENST00000532877 NSFL1CQ9UNZ2 370 aaKnown RBP17.56■□□□□ 0.4
COL16A1-217ENST00000532877 ZNF804BA4D1E1 1349 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 WTIPA6NIX2 430 aaPredicted RBP17.55■□□□□ 0.4
COL16A1-217ENST00000532877 SLC5A1P13866 664 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 ADORA1P30542 326 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 KCNJ4P48050 445 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 CC2D2BQ6DHV5 1058 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 NEUROD6Q96NK8 337 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 DBNDD2Q9BQY9 259 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 RRAGCQ9HB90 399 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 GGA1Q9UJY5 639 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 LEMD3Q9Y2U8 911 aa17.55■□□□□ 0.4
COL16A1-217ENST00000532877 UFL1O94874 794 aa17.54■□□□□ 0.4
COL16A1-217ENST00000532877 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
COL16A1-217ENST00000532877 ATP2B4P23634 1241 aa17.54■□□□□ 0.4
COL16A1-217ENST00000532877 CCDC93Q567U6 631 aa17.54■□□□□ 0.4
COL16A1-217ENST00000532877 DPP8Q6V1X1 898 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-217ENST00000532877 MPNDQ8N594 471 aa17.54■□□□□ 0.4
COL16A1-217ENST00000532877 XAGE2Q96GT9 111 aa17.54■□□□□ 0.4
COL16A1-217ENST00000532877 TIAM2Q8IVF5 1701 aa17.54■□□□□ 0.4
COL16A1-217ENST00000532877 IRS2Q9Y4H2 1338 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 DICER1Q9UPY3 1922 aaKnown RBP17.53■□□□□ 0.4
COL16A1-217ENST00000532877 MX1P20591 662 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 KLRK1P26718 216 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 RGS3P49796 1198 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 SOGA3Q5TF21 947 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 PLEKHM2Q8IWE5 1019 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 SMC1BQ8NDV3 1235 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 TBC1D16Q8TBP0 767 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
COL16A1-217ENST00000532877 FER1L6Q2WGJ9 1857 aa17.52■□□□□ 0.4
COL16A1-217ENST00000532877 ZC3H4Q9UPT8 1303 aaKnown RBP17.52■□□□□ 0.4
COL16A1-217ENST00000532877 HSPA1AP0DMV8 641 aaKnown RBP17.52■□□□□ 0.4
COL16A1-217ENST00000532877 HSPA1BP0DMV9 641 aaKnown RBP17.52■□□□□ 0.4
COL16A1-217ENST00000532877 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
COL16A1-217ENST00000532877 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
COL16A1-217ENST00000532877 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-217ENST00000532877 RNF181Q9P0P0 153 aa17.52■□□□□ 0.4
COL16A1-217ENST00000532877 MED23Q9ULK4 1368 aa17.52■□□□□ 0.39
COL16A1-217ENST00000532877 PDE1AP54750 535 aa17.51■□□□□ 0.39
COL16A1-217ENST00000532877 RTKN2Q8IZC4 609 aa17.51■□□□□ 0.39
COL16A1-217ENST00000532877 GPATCH3Q96I76 525 aa17.51■□□□□ 0.39
COL16A1-217ENST00000532877 RTFDC1Q9BY42 306 aaPredicted RBP17.51■□□□□ 0.39
COL16A1-217ENST00000532877 STAP2Q9UGK3 403 aa17.51■□□□□ 0.39
COL16A1-217ENST00000532877 TTC41PQ6P2S7 1318 aa17.5■□□□□ 0.39
COL16A1-217ENST00000532877 C6orf229H3BNL8 230 aa17.5■□□□□ 0.39
COL16A1-217ENST00000532877 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
COL16A1-217ENST00000532877 C15orf52Q6ZUT6 534 aaKnown RBP17.5■□□□□ 0.39
COL16A1-217ENST00000532877 ECHDC1Q9NTX5 307 aa17.5■□□□□ 0.39
COL16A1-217ENST00000532877 AOX1Q06278 1338 aa17.49■□□□□ 0.39
COL16A1-217ENST00000532877 PHKA1P46020 1223 aa17.49■□□□□ 0.39
COL16A1-217ENST00000532877 GYG1P46976 350 aa17.49■□□□□ 0.39
COL16A1-217ENST00000532877 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
COL16A1-217ENST00000532877 TXNRD3Q86VQ6 643 aa17.49■□□□□ 0.39
COL16A1-217ENST00000532877 PSMD1Q99460 953 aa17.49■□□□□ 0.39
COL16A1-217ENST00000532877 OSBPL3Q9H4L5 887 aa17.49■□□□□ 0.39
COL16A1-217ENST00000532877 BCAMP50895 628 aa17.48■□□□□ 0.39
COL16A1-217ENST00000532877 CCDC158Q5M9N0 1113 aa17.48■□□□□ 0.39
COL16A1-217ENST00000532877 PI4K2BQ8TCG2 481 aa17.48■□□□□ 0.39
COL16A1-217ENST00000532877 FAM84BQ96KN1 310 aaPredicted RBP17.48■□□□□ 0.39
COL16A1-217ENST00000532877 MYH13Q9UKX3 1938 aa17.48■□□□□ 0.39
COL16A1-217ENST00000532877 POTECB2RU33 542 aa17.47■□□□□ 0.39
COL16A1-217ENST00000532877 ARID4AP29374 1257 aaPredicted RBP17.47■□□□□ 0.39
COL16A1-217ENST00000532877 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
COL16A1-217ENST00000532877 CAVIN4Q5BKX8 364 aa17.47■□□□□ 0.39
COL16A1-217ENST00000532877 TTC39AQ5SRH9 613 aa17.47■□□□□ 0.39
COL16A1-217ENST00000532877 FBXO33Q7Z6M2 555 aa17.47■□□□□ 0.39
COL16A1-217ENST00000532877 SUPT20HQ8NEM7 779 aa17.47■□□□□ 0.39
COL16A1-217ENST00000532877 EYA3Q99504 573 aa17.47■□□□□ 0.39
COL16A1-217ENST00000532877 AKAP11Q9UKA4 1901 aa17.47■□□□□ 0.39
COL16A1-217ENST00000532877 GLTPD2A6NH11 291 aa17.46■□□□□ 0.39
COL16A1-217ENST00000532877 NFKBIEO00221 500 aa17.46■□□□□ 0.39
COL16A1-217ENST00000532877 ERC2O15083 957 aa17.46■□□□□ 0.39
COL16A1-217ENST00000532877 GLRX3O76003 335 aaKnown RBP17.46■□□□□ 0.39
COL16A1-217ENST00000532877 ATP5JP18859 108 aa17.46■□□□□ 0.39
COL16A1-217ENST00000532877 WASHC4Q2M389 1173 aa17.46■□□□□ 0.39
COL16A1-217ENST00000532877 ZNF804AQ7Z570 1209 aa17.46■□□□□ 0.39
COL16A1-217ENST00000532877 VPS37DQ86XT2 251 aa17.46■□□□□ 0.39
COL16A1-217ENST00000532877 ZNF512BQ96KM6 892 aaPredicted RBP17.46■□□□□ 0.39
COL16A1-217ENST00000532877 RIMBP2O15034 1052 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms