RNA–Protein interactions for RNA: ENST00000531939.5

IFT46-209, Transcript of intraflagellar transport 46, humanhuman

TSL 2

Gene IFT46, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46-209ENST00000531939 ZNF295-AS1Q8N0V1 137 aa9.72□□□□□ -0.85
IFT46-209ENST00000531939 LRRC59Q96AG4 307 aaKnown RBP9.72□□□□□ -0.85
IFT46-209ENST00000531939 TBC1D2BQ9UPU7 963 aa9.72□□□□□ -0.85
IFT46-209ENST00000531939 HFM1A2PYH4 1435 aa9.72□□□□□ -0.85
IFT46-209ENST00000531939 SCO2A0A1W2PP80 73 aa9.71□□□□□ -0.86
IFT46-209ENST00000531939 EFSO43281 561 aa9.71□□□□□ -0.86
IFT46-209ENST00000531939 BICDL1Q6ZP65 573 aa9.71□□□□□ -0.86
IFT46-209ENST00000531939 CABP1Q9NZU7 370 aa9.71□□□□□ -0.86
IFT46-209ENST00000531939 SERTAD1Q9UHV2 236 aa9.71□□□□□ -0.86
IFT46-209ENST00000531939 IQSEC3Q9UPP2 1182 aaPredicted RBP9.71□□□□□ -0.86
IFT46-209ENST00000531939 NACC1Q96RE7 527 aa9.7□□□□□ -0.86
IFT46-209ENST00000531939 RGS12O14924 1447 aa9.7□□□□□ -0.86
IFT46-209ENST00000531939 KRTAP9-6A0A140TA67 174 aa9.69□□□□□ -0.86
IFT46-209ENST00000531939 SIN3BO75182 1162 aa9.69□□□□□ -0.86
IFT46-209ENST00000531939 RPGRIP1LQ68CZ1 1315 aa9.69□□□□□ -0.86
IFT46-209ENST00000531939 SYT9Q86SS6 491 aa9.69□□□□□ -0.86
IFT46-209ENST00000531939 COL22A1Q8NFW1 1626 aaPredicted RBP9.69□□□□□ -0.86
IFT46-209ENST00000531939 C8orf37Q96NL8 207 aa9.69□□□□□ -0.86
IFT46-209ENST00000531939 ADARB2-AS1A8MUL3 147 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 BACH1O14867 736 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 IRF5Q13568 498 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 PLPP7Q8NBV4 271 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 ORAI2Q96SN7 254 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 PRDM6Q9NQX0 595 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 TPSG1Q9NRR2 321 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 TIMELESSQ9UNS1 1208 aa9.68□□□□□ -0.86
IFT46-209ENST00000531939 CDC42BPGQ6DT37 1551 aa9.67□□□□□ -0.86
IFT46-209ENST00000531939 TMEM229AB2RXF0 380 aa9.67□□□□□ -0.86
IFT46-209ENST00000531939 RBM6P78332 1123 aaKnown RBP9.67□□□□□ -0.86
IFT46-209ENST00000531939 MDFIQ99750 246 aa9.67□□□□□ -0.86
IFT46-209ENST00000531939 QTRT2Q9H974 415 aaKnown RBP9.67□□□□□ -0.86
IFT46-209ENST00000531939 IFT172Q9UG01 1749 aa9.67□□□□□ -0.86
IFT46-209ENST00000531939 SRCAPQ6ZRS2 3230 aa9.66□□□□□ -0.86
IFT46-209ENST00000531939 DYRK3O43781 588 aa9.66□□□□□ -0.86
IFT46-209ENST00000531939 TRIM28Q13263 835 aaKnown RBP9.66□□□□□ -0.86
IFT46-209ENST00000531939 ARTNQ5T4W7 220 aa9.66□□□□□ -0.86
IFT46-209ENST00000531939 ZFP64Q9NPA5 681 aa9.66□□□□□ -0.86
IFT46-209ENST00000531939 GPC6Q9Y625 555 aaPredicted RBP9.66□□□□□ -0.86
IFT46-209ENST00000531939 MYOM2P54296 1465 aa9.66□□□□□ -0.86
IFT46-209ENST00000531939 PXDNQ92626 1479 aa9.66□□□□□ -0.86
IFT46-209ENST00000531939 TECPR2O15040 1411 aa9.65□□□□□ -0.86
IFT46-209ENST00000531939 SPATA31E1Q6ZUB1 1445 aa9.65□□□□□ -0.86
IFT46-209ENST00000531939 WASHC4Q2M389 1173 aa9.65□□□□□ -0.86
IFT46-209ENST00000531939 NEUROD4Q9HD90 331 aa9.65□□□□□ -0.86
IFT46-209ENST00000531939 EP400Q96L91 3159 aa9.65□□□□□ -0.86
IFT46-209ENST00000531939 KNDC1Q76NI1 1749 aa9.65□□□□□ -0.87
IFT46-209ENST00000531939 MARF1Q9Y4F3 1742 aaKnown RBP9.65□□□□□ -0.87
IFT46-209ENST00000531939 ATRNO75882 1429 aa9.65□□□□□ -0.87
IFT46-209ENST00000531939 ADGRF5Q8IZF2 1346 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 M0R082 166 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 SOX11P35716 441 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 VAC14Q08AM6 782 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 SEMA3FQ13275 785 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 NEUROD1Q13562 356 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
IFT46-209ENST00000531939 ZNF417Q8TAU3 575 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 NGLY1Q96IV0 654 aa9.64□□□□□ -0.87
IFT46-209ENST00000531939 ZNF587Q96SQ5 575 aaPredicted RBP9.64□□□□□ -0.87
IFT46-209ENST00000531939 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
IFT46-209ENST00000531939 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
IFT46-209ENST00000531939 TNFRSF25Q93038 417 aa9.63□□□□□ -0.87
IFT46-209ENST00000531939 USP3Q9Y6I4 520 aa9.63□□□□□ -0.87
IFT46-209ENST00000531939 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
IFT46-209ENST00000531939 L3MBTL2Q969R5 705 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 SCHIP1Q9P0W5 487 aaPredicted RBP9.62□□□□□ -0.87
IFT46-209ENST00000531939 USP21Q9UK80 565 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 TRPC5Q9UL62 973 aaPredicted RBP9.62□□□□□ -0.87
IFT46-209ENST00000531939 PCDHGA11Q9Y5H2 935 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 PARP3Q9Y6F1 533 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 CCDC144AA2RUR9 1427 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 PIK3C2GO75747 1445 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 FMN2Q9NZ56 1722 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 PLEKHH1Q9ULM0 1364 aa9.62□□□□□ -0.87
IFT46-209ENST00000531939 NPHP3Q7Z494 1330 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 BCL9LQ86UU0 1499 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 TXLNAP40222 546 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 COL9A3Q14050 684 aaPredicted RBP9.61□□□□□ -0.87
IFT46-209ENST00000531939 TEAD4Q15561 434 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 LRRC69Q6ZNQ3 347 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 WAPLQ7Z5K2 1190 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 NBPF11Q86T75 865 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 ANKRD30BQ9BXX2 1392 aa9.61□□□□□ -0.87
IFT46-209ENST00000531939 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.6□□□□□ -0.87
IFT46-209ENST00000531939 PRSS36Q5K4E3 855 aa9.6□□□□□ -0.87
IFT46-209ENST00000531939 MICALL1Q8N3F8 863 aa9.6□□□□□ -0.87
IFT46-209ENST00000531939 ATAD2Q6PL18 1390 aa9.6□□□□□ -0.87
IFT46-209ENST00000531939 YTHDC2Q9H6S0 1430 aaKnown RBP9.59□□□□□ -0.87
IFT46-209ENST00000531939 KIF1AQ12756 1690 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 C9orf172C9J069 976 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 EML1O00423 815 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 FOXO3O43524 673 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 LZTS3O60299 673 aaPredicted RBP9.59□□□□□ -0.87
IFT46-209ENST00000531939 H2AFB1P0C5Y9 115 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 H2AFB2P0C5Z0 115 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 NOS2P35228 1153 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 XPCQ01831 940 aaPredicted RBP9.59□□□□□ -0.87
IFT46-209ENST00000531939 EML3Q32P44 896 aa9.59□□□□□ -0.87
IFT46-209ENST00000531939 MPHOSPH9Q99550 1183 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms