RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 RIMBP2O15034 1052 aa21.66■■□□□ 1.06
CTSB-222ENST00000531551 KLRK1P26718 216 aa21.66■■□□□ 1.06
CTSB-222ENST00000531551 GRIPAP1Q4V328 841 aa21.66■■□□□ 1.06
CTSB-222ENST00000531551 DBNLQ9UJU6 430 aaKnown RBP21.66■■□□□ 1.06
CTSB-222ENST00000531551 UTRNP46939 3433 aa21.65■■□□□ 1.06
CTSB-222ENST00000531551 PDE4AP27815 886 aa21.64■■□□□ 1.06
CTSB-222ENST00000531551 VPS37DQ86XT2 251 aa21.64■■□□□ 1.06
CTSB-222ENST00000531551 LRRC37AA6NMS7 1700 aa21.64■■□□□ 1.06
CTSB-222ENST00000531551 GYG1P46976 350 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 RGS3P49796 1198 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 GPR162Q16538 588 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 WASHC4Q2M389 1173 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 CAVIN4Q5BKX8 364 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 TXNRD3Q86VQ6 643 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 SUPT20HQ8NEM7 779 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 EYA3Q99504 573 aa21.64■■□□□ 1.05
CTSB-222ENST00000531551 ZC3H12CQ9C0D7 883 aaKnown RBP21.64■■□□□ 1.05
CTSB-222ENST00000531551 BRCA1P38398 1863 aaKnown RBP21.64■■□□□ 1.05
CTSB-222ENST00000531551 YBX3P16989 372 aaKnown RBP eCLIP21.63■■□□□ 1.051e-9■■□□□ 12.9
CTSB-222ENST00000531551 TSHZ3Q63HK5 1081 aa21.63■■□□□ 1.05
CTSB-222ENST00000531551 ARHGAP27Q6ZUM4 889 aa21.63■■□□□ 1.05
CTSB-222ENST00000531551 BCAMP50895 628 aa21.62■■□□□ 1.05
CTSB-222ENST00000531551 FKBP4Q02790 459 aaKnown RBP eCLIP21.62■■□□□ 1.05
CTSB-222ENST00000531551 CCDC158Q5M9N0 1113 aa21.62■■□□□ 1.05
CTSB-222ENST00000531551 TAOK3Q9H2K8 898 aa21.62■■□□□ 1.05
CTSB-222ENST00000531551 MX1P20591 662 aa21.62■■□□□ 1.05
CTSB-222ENST00000531551 TTC39AQ5SRH9 613 aa21.62■■□□□ 1.05
CTSB-222ENST00000531551 GPATCH3Q96I76 525 aa21.62■■□□□ 1.05
CTSB-222ENST00000531551 PSMD1Q99460 953 aa21.62■■□□□ 1.05
CTSB-222ENST00000531551 RTFDC1Q9BY42 306 aaPredicted RBP21.62■■□□□ 1.05
CTSB-222ENST00000531551 ZNF277Q9NRM2 450 aaPredicted RBP21.62■■□□□ 1.05
CTSB-222ENST00000531551 SNED1Q8TER0 1413 aa21.61■■□□□ 1.05
CTSB-222ENST00000531551 G3V3G9 751 aa21.61■■□□□ 1.05
CTSB-222ENST00000531551 DCAF8Q5TAQ9 597 aa21.61■■□□□ 1.05
CTSB-222ENST00000531551 FAM84BQ96KN1 310 aaPredicted RBP21.61■■□□□ 1.05
CTSB-222ENST00000531551 NFKBIEO00221 500 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 PPIP5K2O43314 1243 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 HIBADHP31937 336 aaKnown RBP21.6■■□□□ 1.05
CTSB-222ENST00000531551 PHKA1P46020 1223 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 RASSF7Q02833 373 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 AOC3Q16853 763 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 CCDC102BQ68D86 513 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 MED23Q9ULK4 1368 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 DUOX1Q9NRD9 1551 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 ZNF804AQ7Z570 1209 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 ECHDC1Q9NTX5 307 aa21.6■■□□□ 1.05
CTSB-222ENST00000531551 IQSEC3Q9UPP2 1182 aaPredicted RBP21.6■■□□□ 1.05
CTSB-222ENST00000531551 A0A1B0GUL6 1792 aa21.59■■□□□ 1.05
CTSB-222ENST00000531551 FRAT2O75474 233 aaPredicted RBP21.59■■□□□ 1.05
CTSB-222ENST00000531551 DOK7Q18PE1 504 aa21.59■■□□□ 1.05
CTSB-222ENST00000531551 PLEKHM2Q8IWE5 1019 aa21.59■■□□□ 1.05
CTSB-222ENST00000531551 PDE1AP54750 535 aa21.58■■□□□ 1.05
CTSB-222ENST00000531551 IRS2Q9Y4H2 1338 aa21.58■■□□□ 1.05
CTSB-222ENST00000531551 C15orf52Q6ZUT6 534 aaKnown RBP21.58■■□□□ 1.04
CTSB-222ENST00000531551 FBXO33Q7Z6M2 555 aa21.58■■□□□ 1.04
CTSB-222ENST00000531551 LARGE2Q8N3Y3 721 aa21.58■■□□□ 1.04
CTSB-222ENST00000531551 GNL3LQ9NVN8 582 aaKnown RBP21.58■■□□□ 1.04
CTSB-222ENST00000531551 SALL3Q9BXA9 1300 aa21.57■■□□□ 1.04
CTSB-222ENST00000531551 LTBP1Q14766 1721 aa21.57■■□□□ 1.04
CTSB-222ENST00000531551 KIAA2012Q0VF49 1180 aa21.57■■□□□ 1.04
CTSB-222ENST00000531551 DBNDD1Q9H9R9 158 aa21.57■■□□□ 1.04
CTSB-222ENST00000531551 IARSP41252 1262 aaKnown RBP21.56■■□□□ 1.04
CTSB-222ENST00000531551 BOLA2Q9H3K6 86 aa21.56■■□□□ 1.04
CTSB-222ENST00000531551 TTC41PQ6P2S7 1318 aa21.56■■□□□ 1.04
CTSB-222ENST00000531551 ERC2O15083 957 aa21.56■■□□□ 1.04
CTSB-222ENST00000531551 CD209Q9NNX6 404 aa21.56■■□□□ 1.04
CTSB-222ENST00000531551 UQCRFS1P1P0C7P4 283 aa21.55■■□□□ 1.04
CTSB-222ENST00000531551 COA1Q9GZY4 146 aa21.55■■□□□ 1.04
CTSB-222ENST00000531551 SNRKQ9NRH2 765 aa21.55■■□□□ 1.04
CTSB-222ENST00000531551 STAP2Q9UGK3 403 aa21.55■■□□□ 1.04
CTSB-222ENST00000531551 NDUFB9Q9Y6M9 179 aa21.54■■□□□ 1.04
CTSB-222ENST00000531551 ATP5JP18859 108 aa21.54■■□□□ 1.04
CTSB-222ENST00000531551 SCARF1Q14162 830 aa21.54■■□□□ 1.04
CTSB-222ENST00000531551 PI4K2BQ8TCG2 481 aa21.54■■□□□ 1.04
CTSB-222ENST00000531551 FBXW7Q969H0 707 aa21.54■■□□□ 1.04
CTSB-222ENST00000531551 DNAJC2Q99543 621 aaKnown RBP21.54■■□□□ 1.04
CTSB-222ENST00000531551 JAG2Q9Y219 1238 aa21.54■■□□□ 1.04
CTSB-222ENST00000531551 ARFGEF1Q9Y6D6 1849 aa21.53■■□□□ 1.04
CTSB-222ENST00000531551 LTBP3Q9NS15 1303 aa21.53■■□□□ 1.04
CTSB-222ENST00000531551 ECE2O60344 883 aa21.53■■□□□ 1.04
CTSB-222ENST00000531551 GRIN3BO60391 1043 aa21.53■■□□□ 1.04
CTSB-222ENST00000531551 GLRX3O76003 335 aaKnown RBP21.53■■□□□ 1.04
CTSB-222ENST00000531551 MAP4K4O95819 1239 aaPredicted RBP21.53■■□□□ 1.04
CTSB-222ENST00000531551 ARID4AP29374 1257 aaPredicted RBP21.53■■□□□ 1.04
CTSB-222ENST00000531551 CHAF1AQ13111 956 aaPredicted RBP21.53■■□□□ 1.04
CTSB-222ENST00000531551 PI16Q6UXB8 463 aa21.53■■□□□ 1.04
CTSB-222ENST00000531551 VPS33BQ9H267 617 aa21.53■■□□□ 1.04
CTSB-222ENST00000531551 MCAMP43121 646 aa21.52■■□□□ 1.04
CTSB-222ENST00000531551 RASGRF1Q13972 1273 aa21.52■■□□□ 1.04
CTSB-222ENST00000531551 NIM1KQ8IY84 436 aa21.52■■□□□ 1.04
CTSB-222ENST00000531551 JDP2Q8WYK2 163 aa21.52■■□□□ 1.04
CTSB-222ENST00000531551 OSBPL3Q9H4L5 887 aa21.52■■□□□ 1.04
CTSB-222ENST00000531551 TDRD7Q8NHU6 1098 aaKnown RBP21.52■■□□□ 1.03
CTSB-222ENST00000531551 IL1R1P14778 569 aa21.51■■□□□ 1.03
CTSB-222ENST00000531551 PRELPP51888 382 aa21.51■■□□□ 1.03
CTSB-222ENST00000531551 SPATA5Q8NB90 893 aa21.51■■□□□ 1.03
CTSB-222ENST00000531551 ZNF512BQ96KM6 892 aaPredicted RBP21.51■■□□□ 1.03
CTSB-222ENST00000531551 HMG20BQ9P0W2 317 aa21.51■■□□□ 1.03
CTSB-222ENST00000531551 DENND2AQ9ULE3 1009 aa21.51■■□□□ 1.03
CTSB-222ENST00000531551 ARAP2Q8WZ64 1704 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms