RNA–Protein interactions for RNA: ENST00000530720.1

CTNND1-226, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 832 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-226ENST00000530720 BAP1Q92560 729 aa6.17□□□□□ -1.42
CTNND1-226ENST00000530720 ZBTB1Q9Y2K1 713 aa6.17□□□□□ -1.42
CTNND1-226ENST00000530720 COL15A1P39059 1388 aa6.17□□□□□ -1.42
CTNND1-226ENST00000530720 BCORQ6W2J9 1755 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 SPDYE5A6NIY4 337 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 RNMTO43148 476 aaKnown RBP6.16□□□□□ -1.42
CTNND1-226ENST00000530720 ZMYND10O75800 440 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 HMOX1P09601 288 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 BMP1P13497 986 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 HTRA3P83110 453 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 TTLL12Q14166 644 aaPredicted RBP6.16□□□□□ -1.42
CTNND1-226ENST00000530720 LINC01559Q495D7 138 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 DALRD3Q5D0E6 543 aaKnown RBP6.16□□□□□ -1.42
CTNND1-226ENST00000530720 USPL1Q5W0Q7 1092 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 PIM2Q9P1W9 311 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 NXF1Q9UBU9 619 aaKnown RBP6.16□□□□□ -1.42
CTNND1-226ENST00000530720 NARFQ9UHQ1 456 aa6.16□□□□□ -1.42
CTNND1-226ENST00000530720 VARSP26640 1264 aaKnown RBP6.15□□□□□ -1.42
CTNND1-226ENST00000530720 RASSF7Q02833 373 aa6.15□□□□□ -1.42
CTNND1-226ENST00000530720 GIGYF2Q6Y7W6 1299 aaKnown RBP6.15□□□□□ -1.42
CTNND1-226ENST00000530720 MPNDQ8N594 471 aa6.15□□□□□ -1.42
CTNND1-226ENST00000530720 ZNF511Q8NB15 262 aa6.15□□□□□ -1.42
CTNND1-226ENST00000530720 KNSTRNQ9Y448 316 aa6.15□□□□□ -1.42
CTNND1-226ENST00000530720 ARFGEF2Q9Y6D5 1785 aa6.15□□□□□ -1.43
CTNND1-226ENST00000530720 FER1L6Q2WGJ9 1857 aa6.15□□□□□ -1.43
CTNND1-226ENST00000530720 CCDC88AQ3V6T2 1871 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 NFKBIEO00221 500 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 GJA5P36382 358 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 EIF5P55010 431 aaKnown RBP6.14□□□□□ -1.43
CTNND1-226ENST00000530720 NPAS3Q8IXF0 933 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 JMYQ8N9B5 988 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 IL17REQ8NFR9 667 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 ZNF496Q96IT1 587 aaPredicted RBP6.14□□□□□ -1.43
CTNND1-226ENST00000530720 BEGAINQ9BUH8 593 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 RNF181Q9P0P0 153 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 TLL2Q9Y6L7 1015 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 CEMIPQ8WUJ3 1361 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 NPC1L1Q9UHC9 1359 aa6.14□□□□□ -1.43
CTNND1-226ENST00000530720 DICER1Q9UPY3 1922 aaKnown RBP6.13□□□□□ -1.43
CTNND1-226ENST00000530720 DIAPH1O60610 1272 aaKnown RBP6.13□□□□□ -1.43
CTNND1-226ENST00000530720 SERPINB2P05120 415 aa6.13□□□□□ -1.43
CTNND1-226ENST00000530720 CC2D1BQ5T0F9 858 aaKnown RBP6.13□□□□□ -1.43
CTNND1-226ENST00000530720 TBC1D9BQ66K14 1250 aa6.13□□□□□ -1.43
CTNND1-226ENST00000530720 ZC3H15Q8WU90 426 aaKnown RBP6.13□□□□□ -1.43
CTNND1-226ENST00000530720 RRAGCQ9HB90 399 aa6.13□□□□□ -1.43
CTNND1-226ENST00000530720 ZC3H4Q9UPT8 1303 aaKnown RBP6.13□□□□□ -1.43
CTNND1-226ENST00000530720 HEG1Q9ULI3 1381 aa6.13□□□□□ -1.43
CTNND1-226ENST00000530720 SLX4Q8IY92 1834 aa6.13□□□□□ -1.43
CTNND1-226ENST00000530720 PCNTO95613 3336 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 KCNQ3O43525 872 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 CANXP27824 592 aaKnown RBP6.12□□□□□ -1.43
CTNND1-226ENST00000530720 FSTL1Q12841 308 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 NNTQ13423 1086 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 CACNA1SQ13698 1873 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 DIXDC1Q155Q3 683 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 RSBN1LQ6PCB5 846 aaPredicted RBP6.12□□□□□ -1.43
CTNND1-226ENST00000530720 ZNF790Q6PG37 636 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 LYPD8Q6UX82 237 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 KDM2BQ8NHM5 1336 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 KLRG1Q96E93 195 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 PHACTR3Q96KR7 559 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 ZFP42Q96MM3 310 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 TBC1D2Q9BYX2 928 aa6.12□□□□□ -1.43
CTNND1-226ENST00000530720 SNED1Q8TER0 1413 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 PRAMEF22A3QJZ6 481 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 GLTPD2A6NH11 291 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 CAMTA2O94983 1202 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 LMNB1P20700 586 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 PRR5LQ6MZQ0 368 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 C2CD5Q86YS7 1000 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 IRF7Q92985 503 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 RSPH6AQ9H0K4 717 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 LAMB4A4D0S4 1761 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 ADAMTSL1Q8N6G6 1762 aa6.11□□□□□ -1.43
CTNND1-226ENST00000530720 GNAT3A8MTJ3 354 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 A1BGP04217 495 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 TIMP2P16035 220 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 CTHP32929 405 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 GMPRP36959 345 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 IL6STP40189 918 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-226ENST00000530720 COL13A1Q5TAT6 717 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-226ENST00000530720 MRPL14Q6P1L8 145 aaKnown RBP6.1□□□□□ -1.43
CTNND1-226ENST00000530720 BICDL1Q6ZP65 573 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 TTLL6Q8N841 843 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 CCER1Q8TC90 406 aaPredicted RBP6.1□□□□□ -1.43
CTNND1-226ENST00000530720 BRIP1Q9BX63 1249 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 TBC1D2BQ9UPU7 963 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 PCDHB15Q9Y5E8 787 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 KDM3BQ7LBC6 1761 aa6.1□□□□□ -1.43
CTNND1-226ENST00000530720 LTBP3Q9NS15 1303 aa6.09□□□□□ -1.43
CTNND1-226ENST00000530720 CFAP99D6REC4 459 aa6.09□□□□□ -1.43
CTNND1-226ENST00000530720 H0YIN7 160 aa6.09□□□□□ -1.43
CTNND1-226ENST00000530720 H3BM21 787 aa6.09□□□□□ -1.43
CTNND1-226ENST00000530720 SPTLC1O15269 473 aa6.09□□□□□ -1.43
CTNND1-226ENST00000530720 STARD3NLO95772 234 aa6.09□□□□□ -1.43
CTNND1-226ENST00000530720 ADH1CP00326 375 aa6.09□□□□□ -1.43
CTNND1-226ENST00000530720 F12P00748 615 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-226ENST00000530720 VEGFAP15692 232 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-226ENST00000530720 PIP4K2AP48426 406 aaPredicted RBP6.09□□□□□ -1.43
CTNND1-226ENST00000530720 VEGFBP49765 207 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms