RNA–Protein interactions for RNA: ENST00000529045.1

PTPN22-208, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 4

Gene PTPN22, Length 527 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-208ENST00000529045 DACH1Q9UI36 760 aa9.16□□□□□ -0.94
PTPN22-208ENST00000529045 NEXMIFQ5QGS0 1516 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 SOWAHDA6NJG2 315 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 WNT7AO00755 349 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 PSME1Q06323 249 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 CCDC173Q0VFZ6 552 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 HDAC1Q13547 482 aaPredicted RBP9.15□□□□□ -0.94
PTPN22-208ENST00000529045 TAS1R3Q7RTX0 852 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 KRT27Q7Z3Y8 459 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 MTERF4Q7Z6M4 381 aaKnown RBP9.15□□□□□ -0.94
PTPN22-208ENST00000529045 SMC5Q8IY18 1101 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 DDX17Q92841 729 aaKnown RBP9.15□□□□□ -0.94
PTPN22-208ENST00000529045 MRGPRX2Q96LB1 330 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 PPP1R9BQ96SB3 815 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 C22orf23Q9BZE7 217 aa9.15□□□□□ -0.94
PTPN22-208ENST00000529045 ABCA3Q99758 1704 aa9.14□□□□□ -0.95
PTPN22-208ENST00000529045 RBM25P49756 843 aaKnown RBP9.14□□□□□ -0.95
PTPN22-208ENST00000529045 RARSP54136 660 aaKnown RBP9.14□□□□□ -0.95
PTPN22-208ENST00000529045 CLEC17AQ6ZS10 378 aa9.14□□□□□ -0.95
PTPN22-208ENST00000529045 VASH1Q7L8A9 365 aaPredicted RBP9.14□□□□□ -0.95
PTPN22-208ENST00000529045 SIRT1Q96EB6 747 aa9.14□□□□□ -0.95
PTPN22-208ENST00000529045 NUP188Q5SRE5 1749 aa9.14□□□□□ -0.95
PTPN22-208ENST00000529045 ERVK-9P63128 1117 aa9.13□□□□□ -0.95
PTPN22-208ENST00000529045 CALD1Q05682 793 aaKnown RBP9.13□□□□□ -0.95
PTPN22-208ENST00000529045 R3HDM1Q15032 1099 aaKnown RBP9.13□□□□□ -0.95
PTPN22-208ENST00000529045 VPS72Q15906 364 aa9.13□□□□□ -0.95
PTPN22-208ENST00000529045 NOM1Q5C9Z4 860 aaKnown RBP9.13□□□□□ -0.95
PTPN22-208ENST00000529045 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.13□□□□□ -0.95
PTPN22-208ENST00000529045 TSEN2Q8NCE0 465 aaKnown RBP9.13□□□□□ -0.95
PTPN22-208ENST00000529045 RUNDC1Q96C34 613 aa9.13□□□□□ -0.95
PTPN22-208ENST00000529045 NRAPQ86VF7 1730 aa9.13□□□□□ -0.95
PTPN22-208ENST00000529045 CEP350Q5VT06 3117 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 IFT172Q9UG01 1749 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 TMEM229AB2RXF0 380 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 STAU1O95793 577 aaKnown RBP9.12□□□□□ -0.95
PTPN22-208ENST00000529045 AVPP01185 164 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 MVPQ14764 893 aaKnown RBP9.12□□□□□ -0.95
PTPN22-208ENST00000529045 RGL3Q3MIN7 710 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPN22-208ENST00000529045 SNIP1Q8TAD8 396 aaKnown RBP9.12□□□□□ -0.95
PTPN22-208ENST00000529045 ANP32BQ92688 251 aaKnown RBP9.12□□□□□ -0.95
PTPN22-208ENST00000529045 CDK15Q96Q40 435 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 ZNF358Q9NW07 568 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 TLL2Q9Y6L7 1015 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 RGPD3A6NKT7 1758 aaPredicted RBP9.12□□□□□ -0.95
PTPN22-208ENST00000529045 RGPD4Q7Z3J3 1758 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 METP08581 1390 aa9.12□□□□□ -0.95
PTPN22-208ENST00000529045 THSD7AQ9UPZ6 1657 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 GOLGA6L22H0YM25 854 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 J3QL48 77 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 M0R2N6 131 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 OFD1O75665 1012 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 SMPD1P17405 629 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 WEE1P30291 646 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 GRM5P41594 1212 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 SCNN1DP51172 638 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 RAB3GAP1Q15042 981 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 RC3H1Q5TC82 1133 aaKnown RBP9.11□□□□□ -0.95
PTPN22-208ENST00000529045 DNAJC14Q6Y2X3 702 aaPredicted RBP9.11□□□□□ -0.95
PTPN22-208ENST00000529045 EHBP1Q8NDI1 1231 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 PANK1Q8TE04 598 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 PUS7Q96PZ0 661 aaKnown RBP9.11□□□□□ -0.95
PTPN22-208ENST00000529045 PURBQ96QR8 312 aaKnown RBP9.11□□□□□ -0.95
PTPN22-208ENST00000529045 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 OSBPL3Q9H4L5 887 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 TMPRSS4Q9NRS4 437 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 CLTCL1P53675 1640 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 NSD2O96028 1365 aa9.11□□□□□ -0.95
PTPN22-208ENST00000529045 CAMTA1Q9Y6Y1 1673 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 AXIN1O15169 862 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 MYCP01106 439 aaPredicted RBP9.1□□□□□ -0.95
PTPN22-208ENST00000529045 FSHRP23945 695 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 MCM5P33992 734 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 C1QTNF8P60827 252 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 ZKSCAN2Q63HK3 967 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 ZSCAN30Q86W11 494 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 CCDC146Q8IYE0 955 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 CRIPAKQ8N1N5 446 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 ZNF784Q8NCA9 323 aaPredicted RBP9.1□□□□□ -0.95
PTPN22-208ENST00000529045 CHMP4BQ9H444 224 aaKnown RBP9.1□□□□□ -0.95
PTPN22-208ENST00000529045 ABCC11Q96J66 1382 aa9.1□□□□□ -0.95
PTPN22-208ENST00000529045 UTRNP46939 3433 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 SIAH2O43255 324 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 FKBP5Q13451 457 aaPredicted RBP9.09□□□□□ -0.95
PTPN22-208ENST00000529045 CC2D2BQ6DHV5 1058 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 CAPN12Q6ZSI9 719 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 GAS2L2Q8NHY3 880 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 ORAI2Q96SN7 254 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 PPP1R1BQ9UD71 204 aaPredicted RBP9.09□□□□□ -0.95
PTPN22-208ENST00000529045 DDX19BQ9UMR2 479 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 KIF1BO60333 1816 aa9.09□□□□□ -0.95
PTPN22-208ENST00000529045 NRXN1Q9ULB1 1477 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 IL16Q14005 1332 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 ARID5BQ14865 1188 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 CFAP53Q96M91 514 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 HINFPQ9BQA5 517 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 SPON1Q9HCB6 807 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 CYLDQ9NQC7 956 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 SEPT3Q9UH03 358 aa9.08□□□□□ -0.96
PTPN22-208ENST00000529045 COL14A1Q05707 1796 aaKnown RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms