RNA–Protein interactions for RNA: ENST00000528001.1

CNKSR1-211, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-211ENST00000528001 MMP14P50281 582 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 DCAF8Q5TAQ9 597 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 ZNF804AQ7Z570 1209 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 HELBQ8NG08 1087 aaPredicted RBP16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 DBNDD1Q9H9R9 158 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 CEP126Q9P2H0 1117 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 SCN4AP35499 1836 aa16.23■□□□□ 0.19
CNKSR1-211ENST00000528001 VIL1P09327 827 aaKnown RBP16.22■□□□□ 0.19
CNKSR1-211ENST00000528001 IL1R1P14778 569 aa16.22■□□□□ 0.19
CNKSR1-211ENST00000528001 TXNRD3Q86VQ6 643 aa16.22■□□□□ 0.19
CNKSR1-211ENST00000528001 LPIN2Q92539 896 aa16.22■□□□□ 0.19
CNKSR1-211ENST00000528001 DPF2Q92785 391 aa16.22■□□□□ 0.19
CNKSR1-211ENST00000528001 GPR101Q96P66 508 aaPredicted RBP16.22■□□□□ 0.19
CNKSR1-211ENST00000528001 PSME4Q14997 1843 aa16.22■□□□□ 0.19
CNKSR1-211ENST00000528001 WTIPA6NIX2 430 aaPredicted RBP16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 POTECB2RU33 542 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 KIF3CO14782 793 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 HMMRO75330 724 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 DOK7Q18PE1 504 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 STRIP1Q5VSL9 837 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 SIL1Q9H173 461 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 CD209Q9NNX6 404 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 PA2G4Q9UQ80 394 aaKnown RBP16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 AKAP2Q9Y2D5 859 aa16.21■□□□□ 0.19
CNKSR1-211ENST00000528001 MYO3BQ8WXR4 1341 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 USP17L3A6NCW0 530 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 USP17L4A6NCW7 530 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 IFIT1P09914 478 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 FKBP1AP62942 108 aaKnown RBP16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 G3BP1Q13283 466 aaKnown RBP eCLIP16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 HSP90AB4PQ58FF6 505 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 USP17L1Q7RTZ2 530 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 FBXO33Q7Z6M2 555 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 AGBL3Q8NEM8 1001 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 ZNF526Q8TF50 670 aaPredicted RBP16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 RRAGCQ9HB90 399 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 NMRK2Q9NPI5 230 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 GPR108Q9NPR9 543 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
CNKSR1-211ENST00000528001 PSMD14O00487 310 aa16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 RAD17O75943 681 aa16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 SLC5A1P13866 664 aa16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 KLRK1P26718 216 aa16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 HIBADHP31937 336 aaKnown RBP16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 SCNN1DP51172 638 aa16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 CAVIN4Q5BKX8 364 aa16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 PNMA8AQ86V59 439 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 FAM84BQ96KN1 310 aaPredicted RBP16.19■□□□□ 0.18
CNKSR1-211ENST00000528001 SNAP23O00161 211 aa16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 TOMM70O94826 608 aa16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 SASH1O94885 1247 aa16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 LMOD1P29536 600 aaPredicted RBP16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 ATP2B3Q16720 1220 aa16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 RSBN1LQ6PCB5 846 aaPredicted RBP16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 ERC1Q8IUD2 1116 aa16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 TDRD7Q8NHU6 1098 aaKnown RBP16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 GPRC5DQ9NZD1 345 aa16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 GJA3Q9Y6H8 435 aa16.18■□□□□ 0.18
CNKSR1-211ENST00000528001 DACT2Q5SW24 774 aa16.17■□□□□ 0.18
CNKSR1-211ENST00000528001 RBM46Q8TBY0 533 aaKnown RBP16.17■□□□□ 0.18
CNKSR1-211ENST00000528001 GMLQ99445 158 aa16.17■□□□□ 0.18
CNKSR1-211ENST00000528001 TAF1DQ9H5J8 278 aaPredicted RBP16.17■□□□□ 0.18
CNKSR1-211ENST00000528001 FAM205AQ6ZU69 1335 aa16.17■□□□□ 0.18
CNKSR1-211ENST00000528001 SCN9AQ15858 1988 aa16.17■□□□□ 0.18
CNKSR1-211ENST00000528001 ARAP2Q8WZ64 1704 aa16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 SURF6O75683 361 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 EPHX2P34913 555 aa16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 TFCP2Q12800 502 aa16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 TTLL5Q6EMB2 1281 aa16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 USP50Q70EL3 339 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 SIRT2Q8IXJ6 389 aa16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 KCNQ5Q9NR82 932 aa16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 ADARB2Q9NS39 739 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 ZNF646O15015 1829 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-211ENST00000528001 SEMA3EO15041 775 aa16.15■□□□□ 0.18
CNKSR1-211ENST00000528001 GYG1P46976 350 aa16.15■□□□□ 0.18
CNKSR1-211ENST00000528001 VPS37DQ86XT2 251 aa16.15■□□□□ 0.18
CNKSR1-211ENST00000528001 PDS5AQ29RF7 1337 aaKnown RBP16.15■□□□□ 0.18
CNKSR1-211ENST00000528001 ADAMTSL1Q8N6G6 1762 aa16.14■□□□□ 0.17
CNKSR1-211ENST00000528001 RAB11FIP3O75154 756 aa16.14■□□□□ 0.17
CNKSR1-211ENST00000528001 ZNF280AP59817 542 aaPredicted RBP16.14■□□□□ 0.17
CNKSR1-211ENST00000528001 FSTL1Q12841 308 aa16.14■□□□□ 0.17
CNKSR1-211ENST00000528001 GNL3LQ9NVN8 582 aaKnown RBP16.14■□□□□ 0.17
CNKSR1-211ENST00000528001 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 H7C1D1 291 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 EPS15P42566 896 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 GTF2IP78347 998 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 LDHDQ86WU2 507 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 ZC3H15Q8WU90 426 aaKnown RBP16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 TBC1D22AQ8WUA7 517 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 CRBNQ96SW2 442 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 CNOT7Q9UIV1 285 aaKnown RBP16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 SUGT1Q9Y2Z0 365 aa16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 SUPT16HQ9Y5B9 1047 aaKnown RBP16.13■□□□□ 0.17
CNKSR1-211ENST00000528001 MICALL2Q8IY33 904 aa16.12■□□□□ 0.17
CNKSR1-211ENST00000528001 SMC1BQ8NDV3 1235 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms