RNA–Protein interactions for RNA: ENST00000527653.1

GPAA1-209, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 2

Gene GPAA1, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-209ENST00000527653 VPS37DQ86XT2 251 aa23.83■■□□□ 1.41
GPAA1-209ENST00000527653 C1orf115Q9H7X2 142 aa23.83■■□□□ 1.41
GPAA1-209ENST00000527653 PSMD14O00487 310 aa23.82■■□□□ 1.4
GPAA1-209ENST00000527653 RPS12P25398 132 aaKnown RBP23.82■■□□□ 1.4
GPAA1-209ENST00000527653 EPHX2P34913 555 aa23.82■■□□□ 1.4
GPAA1-209ENST00000527653 GMPSP49915 693 aaPredicted RBP23.82■■□□□ 1.4
GPAA1-209ENST00000527653 PUM3Q15397 648 aaKnown RBP23.82■■□□□ 1.4
GPAA1-209ENST00000527653 EAPPQ56P03 285 aaPredicted RBP23.82■■□□□ 1.4
GPAA1-209ENST00000527653 C15orf52Q6ZUT6 534 aaKnown RBP23.82■■□□□ 1.4
GPAA1-209ENST00000527653 RBM46Q8TBY0 533 aaKnown RBP23.82■■□□□ 1.4
GPAA1-209ENST00000527653 COPRSQ9NQ92 184 aa23.82■■□□□ 1.4
GPAA1-209ENST00000527653 CEP126Q9P2H0 1117 aa23.82■■□□□ 1.4
GPAA1-209ENST00000527653 USP17L3A6NCW0 530 aa23.81■■□□□ 1.4
GPAA1-209ENST00000527653 USP17L4A6NCW7 530 aa23.81■■□□□ 1.4
GPAA1-209ENST00000527653 WTIPA6NIX2 430 aaPredicted RBP23.81■■□□□ 1.4
GPAA1-209ENST00000527653 IFIT1P09914 478 aaKnown RBP23.81■■□□□ 1.4
GPAA1-209ENST00000527653 C1QTNF8P60827 252 aa23.81■■□□□ 1.4
GPAA1-209ENST00000527653 CAVIN4Q5BKX8 364 aa23.81■■□□□ 1.4
GPAA1-209ENST00000527653 USP17L1Q7RTZ2 530 aa23.81■■□□□ 1.4
GPAA1-209ENST00000527653 TAF1DQ9H5J8 278 aaPredicted RBP23.81■■□□□ 1.4
GPAA1-209ENST00000527653 PA2G4Q9UQ80 394 aaKnown RBP23.81■■□□□ 1.4
GPAA1-209ENST00000527653 SCN9AQ15858 1988 aa23.8■■□□□ 1.4
GPAA1-209ENST00000527653 SNAP23O00161 211 aa23.8■■□□□ 1.4
GPAA1-209ENST00000527653 SLC5A1P13866 664 aa23.8■■□□□ 1.4
GPAA1-209ENST00000527653 KLRK1P26718 216 aa23.8■■□□□ 1.4
GPAA1-209ENST00000527653 SMC1BQ8NDV3 1235 aa23.8■■□□□ 1.4
GPAA1-209ENST00000527653 GPRC5DQ9NZD1 345 aa23.8■■□□□ 1.4
GPAA1-209ENST00000527653 POTECB2RU33 542 aa23.79■■□□□ 1.4
GPAA1-209ENST00000527653 H7C1D1 291 aa23.79■■□□□ 1.4
GPAA1-209ENST00000527653 SCNN1DP51172 638 aa23.79■■□□□ 1.4
GPAA1-209ENST00000527653 G3BP1Q13283 466 aaKnown RBP eCLIP23.79■■□□□ 1.4
GPAA1-209ENST00000527653 OS9Q13438 667 aaPredicted RBP23.79■■□□□ 1.4
GPAA1-209ENST00000527653 TXNRD3Q86VQ6 643 aa23.79■■□□□ 1.4
GPAA1-209ENST00000527653 CLEC11AQ9Y240 323 aa23.79■■□□□ 1.4
GPAA1-209ENST00000527653 MYO3BQ8WXR4 1341 aa23.79■■□□□ 1.4
GPAA1-209ENST00000527653 FRAT2O75474 233 aaPredicted RBP23.78■■□□□ 1.4
GPAA1-209ENST00000527653 RRP1P56182 461 aaKnown RBP23.78■■□□□ 1.4
GPAA1-209ENST00000527653 ATP8B2P98198 1209 aa23.78■■□□□ 1.4
GPAA1-209ENST00000527653 CD209Q9NNX6 404 aa23.78■■□□□ 1.4
GPAA1-209ENST00000527653 ADARB2Q9NS39 739 aaKnown RBP23.78■■□□□ 1.4
GPAA1-209ENST00000527653 PNMA6EA0A0J9YXQ4 647 aa23.77■■□□□ 1.4
GPAA1-209ENST00000527653 VIL1P09327 827 aaKnown RBP23.77■■□□□ 1.4
GPAA1-209ENST00000527653 HIBADHP31937 336 aaKnown RBP23.77■■□□□ 1.4
GPAA1-209ENST00000527653 FSTL1Q12841 308 aa23.77■■□□□ 1.4
GPAA1-209ENST00000527653 ATP2B3Q16720 1220 aa23.77■■□□□ 1.4
GPAA1-209ENST00000527653 RSBN1LQ6PCB5 846 aaPredicted RBP23.77■■□□□ 1.4
GPAA1-209ENST00000527653 ATG9AQ7Z3C6 839 aa23.77■■□□□ 1.4
GPAA1-209ENST00000527653 VGLL2Q8N8G2 317 aa23.77■■□□□ 1.4
GPAA1-209ENST00000527653 DPF2Q92785 391 aa23.77■■□□□ 1.4
GPAA1-209ENST00000527653 ZBTB12Q9Y330 459 aaPredicted RBP23.77■■□□□ 1.4
GPAA1-209ENST00000527653 EPS15P42566 896 aa23.76■■□□□ 1.39
GPAA1-209ENST00000527653 STRIP1Q5VSL9 837 aa23.76■■□□□ 1.39
GPAA1-209ENST00000527653 USP50Q70EL3 339 aaPredicted RBP23.76■■□□□ 1.39
GPAA1-209ENST00000527653 LDHDQ86WU2 507 aa23.76■■□□□ 1.39
GPAA1-209ENST00000527653 AGBL3Q8NEM8 1001 aa23.76■■□□□ 1.39
GPAA1-209ENST00000527653 LPIN2Q92539 896 aa23.76■■□□□ 1.39
GPAA1-209ENST00000527653 KCNQ5Q9NR82 932 aa23.76■■□□□ 1.39
GPAA1-209ENST00000527653 CNOT7Q9UIV1 285 aaKnown RBP23.76■■□□□ 1.39
GPAA1-209ENST00000527653 AKAP2Q9Y2D5 859 aa23.76■■□□□ 1.39
GPAA1-209ENST00000527653 HMMRO75330 724 aa23.75■■□□□ 1.39
GPAA1-209ENST00000527653 GTF2IP78347 998 aa23.75■■□□□ 1.39
GPAA1-209ENST00000527653 TTLL5Q6EMB2 1281 aa23.75■■□□□ 1.39
GPAA1-209ENST00000527653 MICALL2Q8IY33 904 aa23.75■■□□□ 1.39
GPAA1-209ENST00000527653 GYG1P46976 350 aa23.74■■□□□ 1.39
GPAA1-209ENST00000527653 C20orf194Q5TEA3 1177 aa23.74■■□□□ 1.39
GPAA1-209ENST00000527653 CHADLQ6NUI6 762 aa23.74■■□□□ 1.39
GPAA1-209ENST00000527653 CEP85Q6P2H3 762 aa23.74■■□□□ 1.39
GPAA1-209ENST00000527653 SSH3Q8TE77 659 aa23.74■■□□□ 1.39
GPAA1-209ENST00000527653 MYH13Q9UKX3 1938 aa23.74■■□□□ 1.39
GPAA1-209ENST00000527653 ZNF609O15014 1411 aa23.74■■□□□ 1.39
GPAA1-209ENST00000527653 SURF6O75683 361 aaKnown RBP23.73■■□□□ 1.39
GPAA1-209ENST00000527653 IL1R1P14778 569 aa23.73■■□□□ 1.39
GPAA1-209ENST00000527653 POLA2Q14181 598 aa23.73■■□□□ 1.39
GPAA1-209ENST00000527653 OGFOD1Q8N543 542 aa23.73■■□□□ 1.39
GPAA1-209ENST00000527653 IRS2Q9Y4H2 1338 aa23.73■■□□□ 1.39
GPAA1-209ENST00000527653 RPAP2Q8IXW5 612 aaPredicted RBP23.72■■□□□ 1.39
GPAA1-209ENST00000527653 ZBTB40Q9NUA8 1239 aa23.72■■□□□ 1.39
GPAA1-209ENST00000527653 HDAC9Q9UKV0 1011 aa23.72■■□□□ 1.39
GPAA1-209ENST00000527653 ARAP2Q8WZ64 1704 aa23.71■■□□□ 1.39
GPAA1-209ENST00000527653 FGFR2P21802 821 aa23.71■■□□□ 1.39
GPAA1-209ENST00000527653 DACT2Q5SW24 774 aa23.71■■□□□ 1.39
GPAA1-209ENST00000527653 FAM84BQ96KN1 310 aaPredicted RBP23.71■■□□□ 1.39
GPAA1-209ENST00000527653 GNL3LQ9NVN8 582 aaKnown RBP23.71■■□□□ 1.39
GPAA1-209ENST00000527653 USP17L8P0C7I0 530 aa23.7■■□□□ 1.38
GPAA1-209ENST00000527653 TFCP2Q12800 502 aa23.7■■□□□ 1.38
GPAA1-209ENST00000527653 HSP90AB4PQ58FF6 505 aa23.7■■□□□ 1.38
GPAA1-209ENST00000527653 SASH1O94885 1247 aa23.69■■□□□ 1.38
GPAA1-209ENST00000527653 MMP14P50281 582 aa23.69■■□□□ 1.38
GPAA1-209ENST00000527653 ERC1Q8IUD2 1116 aa23.69■■□□□ 1.38
GPAA1-209ENST00000527653 ZNF646O15015 1829 aaPredicted RBP23.68■■□□□ 1.38
GPAA1-209ENST00000527653 ADAMTSL1Q8N6G6 1762 aa23.68■■□□□ 1.38
GPAA1-209ENST00000527653 POTEIP0CG38 1075 aa23.68■■□□□ 1.38
GPAA1-209ENST00000527653 POTEJP0CG39 1038 aa23.68■■□□□ 1.38
GPAA1-209ENST00000527653 KIF4BQ2VIQ3 1234 aa23.68■■□□□ 1.38
GPAA1-209ENST00000527653 GORABQ5T7V8 394 aa23.68■■□□□ 1.38
GPAA1-209ENST00000527653 RBM26Q5T8P6 1007 aaKnown RBP23.68■■□□□ 1.38
GPAA1-209ENST00000527653 TDRD7Q8NHU6 1098 aaKnown RBP23.68■■□□□ 1.38
GPAA1-209ENST00000527653 BCAMP50895 628 aa23.67■■□□□ 1.38
GPAA1-209ENST00000527653 CHAF1AQ13111 956 aaPredicted RBP23.67■■□□□ 1.38
GPAA1-209ENST00000527653 TBC1D10BQ4KMP7 808 aaPredicted RBP23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms