RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 CRBNQ96SW2 442 aa14.76□□□□□ -0.05
PSMD13-206ENST00000527047 CHMP4BQ9H444 224 aaKnown RBP14.76□□□□□ -0.05
PSMD13-206ENST00000527047 SNED1Q8TER0 1413 aa14.75□□□□□ -0.05
PSMD13-206ENST00000527047 RFX5P48382 616 aaPredicted RBP14.75□□□□□ -0.05
PSMD13-206ENST00000527047 RPS8P62241 208 aaKnown RBP14.75□□□□□ -0.05
PSMD13-206ENST00000527047 C1orf115Q9H7X2 142 aa14.75□□□□□ -0.05
PSMD13-206ENST00000527047 FER1L6Q2WGJ9 1857 aa14.75□□□□□ -0.05
PSMD13-206ENST00000527047 YBX3P16989 372 aaKnown RBP eCLIP14.74□□□□□ -0.05
PSMD13-206ENST00000527047 IFIT5Q13325 482 aaKnown RBP14.74□□□□□ -0.05
PSMD13-206ENST00000527047 CDC5LQ99459 802 aaKnown RBP14.74□□□□□ -0.05
PSMD13-206ENST00000527047 LTBP1Q14766 1721 aa14.74□□□□□ -0.05
PSMD13-206ENST00000527047 A0A1B0GUL6 1792 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 ANKRD18BA2A2Z9 1011 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 PPEF1O14829 653 aaPredicted RBP14.73□□□□□ -0.05
PSMD13-206ENST00000527047 RIMBP2O15034 1052 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 ATP8B2P98198 1209 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 CCDC57Q2TAC2 916 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 GPR153Q6NV75 609 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 CEP85Q6P2H3 762 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 TMC4Q7Z404 712 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 SLC51AQ86UW1 340 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 WWC3Q9ULE0 1092 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 BCS1LQ9Y276 419 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 CHMP3Q9Y3E7 222 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 ATP6V0A2Q9Y487 856 aa14.73□□□□□ -0.05
PSMD13-206ENST00000527047 PNMA6EA0A0J9YXQ4 647 aa14.72□□□□□ -0.05
PSMD13-206ENST00000527047 PTPN12Q05209 780 aaKnown RBP14.72□□□□□ -0.05
PSMD13-206ENST00000527047 ANKRD18AQ8IVF6 992 aa14.72□□□□□ -0.05
PSMD13-206ENST00000527047 SP8Q8IXZ3 490 aa14.72□□□□□ -0.05
PSMD13-206ENST00000527047 SSH3Q8TE77 659 aa14.72□□□□□ -0.05
PSMD13-206ENST00000527047 ZNF594Q96JF6 807 aaPredicted RBP14.72□□□□□ -0.05
PSMD13-206ENST00000527047 BSDC1Q9NW68 430 aaPredicted RBP14.72□□□□□ -0.05
PSMD13-206ENST00000527047 SRGAP3O43295 1099 aa14.71□□□□□ -0.05
PSMD13-206ENST00000527047 AAMPQ13685 434 aa14.71□□□□□ -0.05
PSMD13-206ENST00000527047 OLFM4Q6UX06 510 aa14.71□□□□□ -0.05
PSMD13-206ENST00000527047 SIRT2Q8IXJ6 389 aa14.71□□□□□ -0.05
PSMD13-206ENST00000527047 KHSRPQ92945 711 aaKnown RBP eCLIP14.71□□□□□ -0.055e-7■■□□□ 12.1
PSMD13-206ENST00000527047 GOLGB1Q14789 3259 aaKnown RBP14.71□□□□□ -0.05
PSMD13-206ENST00000527047 SBF1O95248 1867 aa14.7□□□□□ -0.06
PSMD13-206ENST00000527047 DUOX1Q9NRD9 1551 aa14.7□□□□□ -0.06
PSMD13-206ENST00000527047 C21orf2O43822 256 aa14.7□□□□□ -0.06
PSMD13-206ENST00000527047 ARSIQ5FYB1 569 aa14.7□□□□□ -0.06
PSMD13-206ENST00000527047 CC2D2BQ6DHV5 1058 aa14.7□□□□□ -0.06
PSMD13-206ENST00000527047 RPAP2Q8IXW5 612 aaPredicted RBP14.7□□□□□ -0.06
PSMD13-206ENST00000527047 EXOC6Q8TAG9 804 aa14.7□□□□□ -0.06
PSMD13-206ENST00000527047 COPRSQ9NQ92 184 aa14.7□□□□□ -0.06
PSMD13-206ENST00000527047 IGHMBP2P38935 993 aaKnown RBP14.69□□□□□ -0.06
PSMD13-206ENST00000527047 SOGA3Q5TF21 947 aa14.69□□□□□ -0.06
PSMD13-206ENST00000527047 KLHDC4Q8TBB5 520 aa14.69□□□□□ -0.06
PSMD13-206ENST00000527047 TMC2Q8TDI7 906 aa14.69□□□□□ -0.06
PSMD13-206ENST00000527047 PUS3Q9BZE2 481 aaKnown RBP14.69□□□□□ -0.06
PSMD13-206ENST00000527047 MINPP1Q9UNW1 487 aa14.69□□□□□ -0.06
PSMD13-206ENST00000527047 RIPOR2Q9Y4F9 1068 aa14.69□□□□□ -0.06
PSMD13-206ENST00000527047 PCDHB15Q9Y5E8 787 aa14.69□□□□□ -0.06
PSMD13-206ENST00000527047 CCDC88AQ3V6T2 1871 aa14.68□□□□□ -0.06
PSMD13-206ENST00000527047 IRX6P78412 446 aaPredicted RBP14.68□□□□□ -0.06
PSMD13-206ENST00000527047 GRIPAP1Q4V328 841 aa14.68□□□□□ -0.06
PSMD13-206ENST00000527047 CCDC93Q567U6 631 aa14.68□□□□□ -0.06
PSMD13-206ENST00000527047 LDHAL6AQ6ZMR3 332 aa14.68□□□□□ -0.06
PSMD13-206ENST00000527047 MPHOSPH8Q99549 860 aa14.68□□□□□ -0.06
PSMD13-206ENST00000527047 ZSWIM6Q9HCJ5 1215 aa14.68□□□□□ -0.06
PSMD13-206ENST00000527047 PODXL2Q9NZ53 605 aa14.68□□□□□ -0.06
PSMD13-206ENST00000527047 PA2G4Q9UQ80 394 aaKnown RBP14.68□□□□□ -0.06
PSMD13-206ENST00000527047 LTBP3Q9NS15 1303 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 EYA2O00167 538 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 NFKBIEO00221 500 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 CIAO1O76071 339 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 GPR162Q16538 588 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 LRRC24Q50LG9 513 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 TAF7LQ5H9L4 462 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 ATG9AQ7Z3C6 839 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
PSMD13-206ENST00000527047 RTFDC1Q9BY42 306 aaPredicted RBP14.67□□□□□ -0.06
PSMD13-206ENST00000527047 NOP58Q9Y2X3 529 aaKnown RBP14.67□□□□□ -0.06
PSMD13-206ENST00000527047 GRIN3BO60391 1043 aa14.66□□□□□ -0.06
PSMD13-206ENST00000527047 GPSM2P81274 684 aa14.66□□□□□ -0.06
PSMD13-206ENST00000527047 VGLL2Q8N8G2 317 aa14.66□□□□□ -0.06
PSMD13-206ENST00000527047 PSMD1Q99460 953 aa14.66□□□□□ -0.06
PSMD13-206ENST00000527047 KRTAP3-3Q9BYR6 98 aa14.66□□□□□ -0.06
PSMD13-206ENST00000527047 KRTAP3-2Q9BYR7 98 aa14.66□□□□□ -0.06
PSMD13-206ENST00000527047 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
PSMD13-206ENST00000527047 CHRNDQ07001 517 aa14.65□□□□□ -0.06
PSMD13-206ENST00000527047 MPNDQ8N594 471 aa14.65□□□□□ -0.06
PSMD13-206ENST00000527047 CNNM1Q9NRU3 951 aa14.65□□□□□ -0.06
PSMD13-206ENST00000527047 XDHP47989 1333 aa14.65□□□□□ -0.06
PSMD13-206ENST00000527047 MROH5Q6ZUA9 1318 aa14.65□□□□□ -0.06
PSMD13-206ENST00000527047 WTIPA6NIX2 430 aaPredicted RBP14.64□□□□□ -0.07
PSMD13-206ENST00000527047 HMMRO75330 724 aa14.64□□□□□ -0.07
PSMD13-206ENST00000527047 PRELPP51888 382 aa14.64□□□□□ -0.07
PSMD13-206ENST00000527047 FKBP4Q02790 459 aaKnown RBP eCLIP14.64□□□□□ -0.07
PSMD13-206ENST00000527047 ANKRD2Q9GZV1 360 aa14.64□□□□□ -0.07
PSMD13-206ENST00000527047 SIL1Q9H173 461 aa14.64□□□□□ -0.07
PSMD13-206ENST00000527047 TMX4Q9H1E5 349 aaPredicted RBP14.64□□□□□ -0.07
PSMD13-206ENST00000527047 POLLQ9UGP5 575 aa14.64□□□□□ -0.07
PSMD13-206ENST00000527047 NSFL1CQ9UNZ2 370 aaKnown RBP14.64□□□□□ -0.07
PSMD13-206ENST00000527047 CHD4Q14839 1912 aa14.63□□□□□ -0.07
PSMD13-206ENST00000527047 IL15P40933 162 aaPredicted RBP14.63□□□□□ -0.07
PSMD13-206ENST00000527047 VARS2Q5ST30 1063 aaKnown RBP14.63□□□□□ -0.07
PSMD13-206ENST00000527047 DPP8Q6V1X1 898 aaPredicted RBP14.63□□□□□ -0.07
PSMD13-206ENST00000527047 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms