RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 UBE4AQ14139 1066 aa20.24■□□□□ 0.83
SSSCA1-202ENST00000526433 METTL24Q5JXM2 366 aa20.24■□□□□ 0.83
SSSCA1-202ENST00000526433 SMC1BQ8NDV3 1235 aa20.24■□□□□ 0.83
SSSCA1-202ENST00000526433 IRS2Q9Y4H2 1338 aa20.24■□□□□ 0.83
SSSCA1-202ENST00000526433 POTEIP0CG38 1075 aa20.23■□□□□ 0.83
SSSCA1-202ENST00000526433 POTEJP0CG39 1038 aa20.23■□□□□ 0.83
SSSCA1-202ENST00000526433 FSTL1Q12841 308 aa20.23■□□□□ 0.83
SSSCA1-202ENST00000526433 MTX1Q13505 466 aa20.23■□□□□ 0.83
SSSCA1-202ENST00000526433 EAPPQ56P03 285 aaPredicted RBP20.23■□□□□ 0.83
SSSCA1-202ENST00000526433 PNMA8AQ86V59 439 aaPredicted RBP20.23■□□□□ 0.83
SSSCA1-202ENST00000526433 CNOT7Q9UIV1 285 aaKnown RBP20.23■□□□□ 0.83
SSSCA1-202ENST00000526433 USP17L3A6NCW0 530 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 USP17L4A6NCW7 530 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 SRGAP3O43295 1099 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 USP17L1Q7RTZ2 530 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 ATG9AQ7Z3C6 839 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 DPF2Q92785 391 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 SIL1Q9H173 461 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 COPRSQ9NQ92 184 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 FBXO3Q9UK99 471 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 PA2G4Q9UQ80 394 aaKnown RBP20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 CLEC11AQ9Y240 323 aa20.22■□□□□ 0.83
SSSCA1-202ENST00000526433 PDE8BO95263 885 aa20.21■□□□□ 0.83
SSSCA1-202ENST00000526433 LDHDQ86WU2 507 aa20.21■□□□□ 0.83
SSSCA1-202ENST00000526433 VGLL2Q8N8G2 317 aa20.21■□□□□ 0.83
SSSCA1-202ENST00000526433 H7C1D1 291 aa20.2■□□□□ 0.82
SSSCA1-202ENST00000526433 CIAO1O76071 339 aa20.2■□□□□ 0.82
SSSCA1-202ENST00000526433 RPS12P25398 132 aaKnown RBP20.2■□□□□ 0.82
SSSCA1-202ENST00000526433 CHADLQ6NUI6 762 aa20.2■□□□□ 0.82
SSSCA1-202ENST00000526433 RSBN1LQ6PCB5 846 aaPredicted RBP20.2■□□□□ 0.82
SSSCA1-202ENST00000526433 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.2■□□□□ 0.82
SSSCA1-202ENST00000526433 ADARB2Q9NS39 739 aaKnown RBP20.2■□□□□ 0.82
SSSCA1-202ENST00000526433 SHTN1A0MZ66 631 aa20.19■□□□□ 0.82
SSSCA1-202ENST00000526433 ATP8B2P98198 1209 aa20.19■□□□□ 0.82
SSSCA1-202ENST00000526433 TTLL5Q6EMB2 1281 aa20.19■□□□□ 0.82
SSSCA1-202ENST00000526433 USP50Q70EL3 339 aaPredicted RBP20.19■□□□□ 0.82
SSSCA1-202ENST00000526433 ZNF804AQ7Z570 1209 aa20.19■□□□□ 0.82
SSSCA1-202ENST00000526433 MICALL2Q8IY33 904 aa20.19■□□□□ 0.82
SSSCA1-202ENST00000526433 C1orf115Q9H7X2 142 aa20.19■□□□□ 0.82
SSSCA1-202ENST00000526433 PSME4Q14997 1843 aa20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 PNMA6EA0A0J9YXQ4 647 aa20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 STRIP1Q5VSL9 837 aa20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 AGBL3Q8NEM8 1001 aa20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 FBXW7Q969H0 707 aa20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 FAM84BQ96KN1 310 aaPredicted RBP20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 CEP126Q9P2H0 1117 aa20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 COG6Q9Y2V7 657 aa20.18■□□□□ 0.82
SSSCA1-202ENST00000526433 IL1R1P14778 569 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 HSPA6P17066 643 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 IL15P40933 162 aaPredicted RBP20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 GYG1P46976 350 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 GTF2IP78347 998 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 PDE3AQ14432 1141 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 MVPQ14764 893 aaKnown RBP20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 DACT2Q5SW24 774 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 GMLQ99445 158 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 MXD3Q9BW11 206 aa20.17■□□□□ 0.82
SSSCA1-202ENST00000526433 FGFR2P21802 821 aa20.16■□□□□ 0.82
SSSCA1-202ENST00000526433 PUM3Q15397 648 aaKnown RBP20.16■□□□□ 0.82
SSSCA1-202ENST00000526433 FBXO33Q7Z6M2 555 aa20.16■□□□□ 0.82
SSSCA1-202ENST00000526433 IFIT1P09914 478 aaKnown RBP20.15■□□□□ 0.82
SSSCA1-202ENST00000526433 HIRAP54198 1017 aaPredicted RBP20.15■□□□□ 0.82
SSSCA1-202ENST00000526433 C20orf194Q5TEA3 1177 aa20.15■□□□□ 0.82
SSSCA1-202ENST00000526433 SAMD7Q7Z3H4 446 aa20.15■□□□□ 0.82
SSSCA1-202ENST00000526433 DDX19BQ9UMR2 479 aa20.15■□□□□ 0.82
SSSCA1-202ENST00000526433 POLA2Q14181 598 aa20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 TBC1D10BQ4KMP7 808 aaPredicted RBP20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 CAVIN4Q5BKX8 364 aa20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 RBM26Q5T8P6 1007 aaKnown RBP20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 MAP1SQ66K74 1059 aaPredicted RBP20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 TDRD7Q8NHU6 1098 aaKnown RBP20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 TRPM4Q8TD43 1214 aa20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 SSH3Q8TE77 659 aa20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 LPIN2Q92539 896 aa20.14■□□□□ 0.81
SSSCA1-202ENST00000526433 ADAMTSL1Q8N6G6 1762 aa20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 SASH1O94885 1247 aa20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 USP17L8P0C7I0 530 aa20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 SLC5A1P13866 664 aa20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 ZNF280AP59817 542 aaPredicted RBP20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 G3BP1Q13283 466 aaKnown RBP eCLIP20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 VPS37DQ86XT2 251 aa20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 CNTROBQ8N137 903 aa20.13■□□□□ 0.81
SSSCA1-202ENST00000526433 ZNF609O15014 1411 aa20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 MYO3BQ8WXR4 1341 aa20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 ITGBL1O95965 494 aaPredicted RBP20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 EGFRP00533 1210 aa20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 BCAMP50895 628 aa20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 ATP2B3Q16720 1220 aa20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 CHMP4BQ9H444 224 aaKnown RBP20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 ZBTB40Q9NUA8 1239 aa20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 PGAP2Q9UHJ9 254 aa20.12■□□□□ 0.81
SSSCA1-202ENST00000526433 TFCP2Q12800 502 aa20.11■□□□□ 0.81
SSSCA1-202ENST00000526433 CEP85Q6P2H3 762 aa20.11■□□□□ 0.81
SSSCA1-202ENST00000526433 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
SSSCA1-202ENST00000526433 JAG2Q9Y219 1238 aa20.11■□□□□ 0.81
SSSCA1-202ENST00000526433 ZNF646O15015 1829 aaPredicted RBP20.11■□□□□ 0.81
SSSCA1-202ENST00000526433 FAM205AQ6ZU69 1335 aa20.1■□□□□ 0.81
SSSCA1-202ENST00000526433 APLP1P51693 650 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms