RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 PA2G4Q9UQ80 394 aaKnown RBP21.47■■□□□ 1.03
PKP3-203ENST00000525642 ZNF609O15014 1411 aa21.46■■□□□ 1.03
PKP3-203ENST00000525642 VEGFAP15692 232 aaPredicted RBP21.46■■□□□ 1.03
PKP3-203ENST00000525642 FGFR2P21802 821 aa21.46■■□□□ 1.03
PKP3-203ENST00000525642 IL15P40933 162 aaPredicted RBP21.45■■□□□ 1.02
PKP3-203ENST00000525642 TNIP1Q15025 636 aa21.45■■□□□ 1.02
PKP3-203ENST00000525642 CHMP4BQ9H444 224 aaKnown RBP21.45■■□□□ 1.02
PKP3-203ENST00000525642 C1orf115Q9H7X2 142 aa21.45■■□□□ 1.02
PKP3-203ENST00000525642 KCNQ5Q9NR82 932 aa21.45■■□□□ 1.02
PKP3-203ENST00000525642 VIL1P09327 827 aaKnown RBP21.44■■□□□ 1.02
PKP3-203ENST00000525642 SCNN1DP51172 638 aa21.44■■□□□ 1.02
PKP3-203ENST00000525642 METTL24Q5JXM2 366 aa21.44■■□□□ 1.02
PKP3-203ENST00000525642 CEP85Q6P2H3 762 aa21.44■■□□□ 1.02
PKP3-203ENST00000525642 RAD17O75943 681 aa21.43■■□□□ 1.02
PKP3-203ENST00000525642 KCNJ4P48050 445 aa21.43■■□□□ 1.02
PKP3-203ENST00000525642 CD209Q9NNX6 404 aa21.43■■□□□ 1.02
PKP3-203ENST00000525642 IQCA1LA6NCM1 817 aa21.42■■□□□ 1.02
PKP3-203ENST00000525642 PSMD14O00487 310 aa21.42■■□□□ 1.02
PKP3-203ENST00000525642 IL1R1P14778 569 aa21.42■■□□□ 1.02
PKP3-203ENST00000525642 DPF2Q92785 391 aa21.42■■□□□ 1.02
PKP3-203ENST00000525642 FAM84BQ96KN1 310 aaPredicted RBP21.42■■□□□ 1.02
PKP3-203ENST00000525642 SIL1Q9H173 461 aa21.42■■□□□ 1.02
PKP3-203ENST00000525642 NOP58Q9Y2X3 529 aaKnown RBP21.42■■□□□ 1.02
PKP3-203ENST00000525642 FBXO33Q7Z6M2 555 aa21.41■■□□□ 1.02
PKP3-203ENST00000525642 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
PKP3-203ENST00000525642 GJA3Q9Y6H8 435 aa21.41■■□□□ 1.02
PKP3-203ENST00000525642 ZBTB22O15209 634 aa21.4■■□□□ 1.02
PKP3-203ENST00000525642 TOMM70O94826 608 aa21.4■■□□□ 1.02
PKP3-203ENST00000525642 RPS12P25398 132 aaKnown RBP21.4■■□□□ 1.02
PKP3-203ENST00000525642 PUM3Q15397 648 aaKnown RBP21.4■■□□□ 1.02
PKP3-203ENST00000525642 GMLQ99445 158 aa21.4■■□□□ 1.02
PKP3-203ENST00000525642 TAF1DQ9H5J8 278 aaPredicted RBP21.4■■□□□ 1.02
PKP3-203ENST00000525642 GPRC5DQ9NZD1 345 aa21.4■■□□□ 1.02
PKP3-203ENST00000525642 CEP126Q9P2H0 1117 aa21.4■■□□□ 1.02
PKP3-203ENST00000525642 HACL1Q9UJ83 578 aa21.4■■□□□ 1.02
PKP3-203ENST00000525642 ADAMTSL1Q8N6G6 1762 aa21.4■■□□□ 1.02
PKP3-203ENST00000525642 USP17L3A6NCW0 530 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 USP17L4A6NCW7 530 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 G3V3G9 751 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 GMPSP49915 693 aaPredicted RBP21.39■■□□□ 1.01
PKP3-203ENST00000525642 DCAF8Q5TAQ9 597 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 STRIP1Q5VSL9 837 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 USP17L1Q7RTZ2 530 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 ZNF804AQ7Z570 1209 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 SIRT2Q8IXJ6 389 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 TDRD7Q8NHU6 1098 aaKnown RBP21.39■■□□□ 1.01
PKP3-203ENST00000525642 LPIN2Q92539 896 aa21.39■■□□□ 1.01
PKP3-203ENST00000525642 DACT2Q5SW24 774 aa21.38■■□□□ 1.01
PKP3-203ENST00000525642 AGBL3Q8NEM8 1001 aa21.38■■□□□ 1.01
PKP3-203ENST00000525642 ARAP2Q8WZ64 1704 aa21.38■■□□□ 1.01
PKP3-203ENST00000525642 SASH1O94885 1247 aa21.37■■□□□ 1.01
PKP3-203ENST00000525642 HIBADHP31937 336 aaKnown RBP21.37■■□□□ 1.01
PKP3-203ENST00000525642 EPS15P42566 896 aa21.37■■□□□ 1.01
PKP3-203ENST00000525642 RSBN1LQ6PCB5 846 aaPredicted RBP21.37■■□□□ 1.01
PKP3-203ENST00000525642 RBM46Q8TBY0 533 aaKnown RBP21.37■■□□□ 1.01
PKP3-203ENST00000525642 ZBTB12Q9Y330 459 aaPredicted RBP21.37■■□□□ 1.01
PKP3-203ENST00000525642 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.37■■□□□ 1.01
PKP3-203ENST00000525642 IFIT1P09914 478 aaKnown RBP21.36■■□□□ 1.01
PKP3-203ENST00000525642 EPHX2P34913 555 aa21.36■■□□□ 1.01
PKP3-203ENST00000525642 GYG1P46976 350 aa21.36■■□□□ 1.01
PKP3-203ENST00000525642 FAM205AQ6ZU69 1335 aa21.35■■□□□ 1.01
PKP3-203ENST00000525642 FKBP1AP62942 108 aaKnown RBP21.35■■□□□ 1.01
PKP3-203ENST00000525642 TFCP2Q12800 502 aa21.35■■□□□ 1.01
PKP3-203ENST00000525642 G3BP1Q13283 466 aaKnown RBP eCLIP21.35■■□□□ 1.01
PKP3-203ENST00000525642 ATP2B3Q16720 1220 aa21.35■■□□□ 1.01
PKP3-203ENST00000525642 GPR108Q9NPR9 543 aa21.35■■□□□ 1.01
PKP3-203ENST00000525642 SLC5A1P13866 664 aa21.34■■□□□ 1.01
PKP3-203ENST00000525642 LMOD1P29536 600 aaPredicted RBP21.34■■□□□ 1.01
PKP3-203ENST00000525642 TTLL5Q6EMB2 1281 aa21.34■■□□□ 1.01
PKP3-203ENST00000525642 USP50Q70EL3 339 aaPredicted RBP21.34■■□□□ 1.01
PKP3-203ENST00000525642 PNMA8AQ86V59 439 aaPredicted RBP21.34■■□□□ 1.01
PKP3-203ENST00000525642 ADARB2Q9NS39 739 aaKnown RBP21.34■■□□□ 1.01
PKP3-203ENST00000525642 CNOT7Q9UIV1 285 aaKnown RBP21.34■■□□□ 1.01
PKP3-203ENST00000525642 MYO3BQ8WXR4 1341 aa21.33■■□□□ 1.01
PKP3-203ENST00000525642 SURF6O75683 361 aaKnown RBP21.33■■□□□ 1.01
PKP3-203ENST00000525642 ZNF280AP59817 542 aaPredicted RBP21.33■■□□□ 1.01
PKP3-203ENST00000525642 CAVIN4Q5BKX8 364 aa21.33■■□□□ 1.01
PKP3-203ENST00000525642 AKAP2Q9Y2D5 859 aa21.33■■□□□ 1.01
PKP3-203ENST00000525642 POTEIP0CG38 1075 aa21.32■■□□□ 1
PKP3-203ENST00000525642 POTEJP0CG39 1038 aa21.32■■□□□ 1
PKP3-203ENST00000525642 MMP14P50281 582 aa21.32■■□□□ 1
PKP3-203ENST00000525642 BCAMP50895 628 aa21.32■■□□□ 1
PKP3-203ENST00000525642 C1QTNF8P60827 252 aa21.32■■□□□ 1
PKP3-203ENST00000525642 GTF2IP78347 998 aa21.32■■□□□ 1
PKP3-203ENST00000525642 PGAP2Q9UHJ9 254 aa21.32■■□□□ 1
PKP3-203ENST00000525642 A0A1B0GUL7 405 aa21.31■■□□□ 1
PKP3-203ENST00000525642 SHTN1A0MZ66 631 aa21.31■■□□□ 1
PKP3-203ENST00000525642 TIMM10P62072 90 aa21.31■■□□□ 1
PKP3-203ENST00000525642 FSTL1Q12841 308 aa21.31■■□□□ 1
PKP3-203ENST00000525642 LDHDQ86WU2 507 aa21.31■■□□□ 1
PKP3-203ENST00000525642 MICALL2Q8IY33 904 aa21.31■■□□□ 1
PKP3-203ENST00000525642 C16orf71Q8IYS4 520 aaPredicted RBP21.31■■□□□ 1
PKP3-203ENST00000525642 CERS5Q8N5B7 392 aa21.31■■□□□ 1
PKP3-203ENST00000525642 H7C1D1 291 aa21.3■■□□□ 1
PKP3-203ENST00000525642 HMMRO75330 724 aa21.3■■□□□ 1
PKP3-203ENST00000525642 HIRAP54198 1017 aaPredicted RBP21.3■■□□□ 1
PKP3-203ENST00000525642 CRBNQ96SW2 442 aa21.3■■□□□ 1
PKP3-203ENST00000525642 MXD3Q9BW11 206 aa21.3■■□□□ 1
PKP3-203ENST00000525642 SMC1BQ8NDV3 1235 aa21.29■■□□□ 1
PKP3-203ENST00000525642 SUPT16HQ9Y5B9 1047 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms