RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 NKAPLQ5M9Q1 402 aa10.21□□□□□ -0.77
COPB1-203ENST00000525214 GLYCTKQ8IVS8 523 aa10.21□□□□□ -0.77
COPB1-203ENST00000525214 SNX29Q8TEQ0 813 aa10.21□□□□□ -0.77
COPB1-203ENST00000525214 HHIPQ96QV1 700 aa10.21□□□□□ -0.77
COPB1-203ENST00000525214 SSBP4Q9BWG4 385 aaPredicted RBP10.21□□□□□ -0.77
COPB1-203ENST00000525214 DZANK1Q9NVP4 752 aa10.21□□□□□ -0.77
COPB1-203ENST00000525214 PPME1Q9Y570 386 aa10.21□□□□□ -0.77
COPB1-203ENST00000525214 LINC01387J3KSC0 135 aa10.2□□□□□ -0.78
COPB1-203ENST00000525214 EPHA1P21709 976 aa10.2□□□□□ -0.78
COPB1-203ENST00000525214 CDC27P30260 824 aa10.2□□□□□ -0.78
COPB1-203ENST00000525214 TXNDC11Q6PKC3 985 aa10.2□□□□□ -0.78
COPB1-203ENST00000525214 GALNT11Q8NCW6 608 aa10.2□□□□□ -0.78
COPB1-203ENST00000525214 SRA1Q9HD15 236 aaKnown RBP10.2□□□□□ -0.78
COPB1-203ENST00000525214 SH2B1Q9NRF2 756 aaPredicted RBP10.2□□□□□ -0.78
COPB1-203ENST00000525214 LOC100996750A0A140TA64 210 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 PHACTR2O75167 634 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 NOS3P29474 1203 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 PDE4CQ08493 712 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 WFDC12Q8WWY7 111 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 PMEPA1Q969W9 287 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 KRTAP4-6Q9BYQ5 205 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 ADAM19Q9H013 955 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 MUC3BQ9H195 1237 aa10.19□□□□□ -0.78
COPB1-203ENST00000525214 MAP4K3Q8IVH8 894 aa10.18□□□□□ -0.78
COPB1-203ENST00000525214 PTPRAP18433 802 aa10.17□□□□□ -0.78
COPB1-203ENST00000525214 ZKSCAN3Q9BRR0 538 aa10.17□□□□□ -0.78
COPB1-203ENST00000525214 CDC25BP30305 580 aa10.16□□□□□ -0.78
COPB1-203ENST00000525214 IREB2P48200 963 aaKnown RBP10.16□□□□□ -0.78
COPB1-203ENST00000525214 SEMA6BQ9H3T3 888 aa10.16□□□□□ -0.78
COPB1-203ENST00000525214 LATS2Q9NRM7 1088 aa10.16□□□□□ -0.78
COPB1-203ENST00000525214 BRPF3Q9ULD4 1205 aa10.16□□□□□ -0.78
COPB1-203ENST00000525214 PDE2AO00408 941 aaPredicted RBP10.15□□□□□ -0.78
COPB1-203ENST00000525214 DYRK3O43781 588 aa10.15□□□□□ -0.78
COPB1-203ENST00000525214 FOXD4L6Q3SYB3 417 aaPredicted RBP10.15□□□□□ -0.78
COPB1-203ENST00000525214 PEAR1Q5VY43 1037 aaPredicted RBP10.15□□□□□ -0.78
COPB1-203ENST00000525214 FOXD4L3Q6VB84 417 aaPredicted RBP10.15□□□□□ -0.78
COPB1-203ENST00000525214 TMEM102Q8N9M5 508 aaPredicted RBP10.15□□□□□ -0.78
COPB1-203ENST00000525214 MEGF10Q96KG7 1140 aa10.15□□□□□ -0.78
COPB1-203ENST00000525214 OSMRQ99650 979 aa10.15□□□□□ -0.78
COPB1-203ENST00000525214 CARD10Q9BWT7 1032 aa10.15□□□□□ -0.78
COPB1-203ENST00000525214 MRPL18Q9H0U6 180 aaKnown RBP10.15□□□□□ -0.78
COPB1-203ENST00000525214 ZFYVE28Q9HCC9 887 aa10.15□□□□□ -0.78
COPB1-203ENST00000525214 KCNK4Q9NYG8 393 aa10.15□□□□□ -0.78
COPB1-203ENST00000525214 ALX3O95076 343 aa10.14□□□□□ -0.79
COPB1-203ENST00000525214 TMEM130Q8N3G9 435 aa10.14□□□□□ -0.79
COPB1-203ENST00000525214 NXPE3Q969Y0 559 aa10.14□□□□□ -0.79
COPB1-203ENST00000525214 FAM129BQ96TA1 746 aa10.14□□□□□ -0.79
COPB1-203ENST00000525214 SOX13Q9UN79 622 aa10.14□□□□□ -0.79
COPB1-203ENST00000525214 AMOTL2Q9Y2J4 779 aa10.14□□□□□ -0.79
COPB1-203ENST00000525214 F8W735 103 aaPredicted RBP10.13□□□□□ -0.79
COPB1-203ENST00000525214 FSCN2O14926 492 aa10.13□□□□□ -0.79
COPB1-203ENST00000525214 WISP1O95388 367 aa10.13□□□□□ -0.79
COPB1-203ENST00000525214 IGHA2P01877 340 aa10.13□□□□□ -0.79
COPB1-203ENST00000525214 POLR3DP05423 398 aaPredicted RBP10.13□□□□□ -0.79
COPB1-203ENST00000525214 EDN3P14138 238 aa10.13□□□□□ -0.79
COPB1-203ENST00000525214 CCER1Q8TC90 406 aaPredicted RBP10.13□□□□□ -0.79
COPB1-203ENST00000525214 TP53INP1Q96A56 240 aa10.12□□□□□ -0.79
COPB1-203ENST00000525214 AKTIPQ9H8T0 292 aa10.12□□□□□ -0.79
COPB1-203ENST00000525214 GNEQ9Y223 722 aaKnown RBP10.12□□□□□ -0.79
COPB1-203ENST00000525214 SOWAHDA6NJG2 315 aa10.11□□□□□ -0.79
COPB1-203ENST00000525214 H3BRJ5 948 aa10.11□□□□□ -0.79
COPB1-203ENST00000525214 NDUFB5O43674 189 aa10.11□□□□□ -0.79
COPB1-203ENST00000525214 BRD1O95696 1058 aa10.11□□□□□ -0.79
COPB1-203ENST00000525214 CD68P34810 354 aaPredicted RBP10.11□□□□□ -0.79
COPB1-203ENST00000525214 Q6ZS46 218 aa10.11□□□□□ -0.79
COPB1-203ENST00000525214 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.11□□□□□ -0.79
COPB1-203ENST00000525214 AGGF1Q8N302 714 aaeCLIP10.11□□□□□ -0.79
COPB1-203ENST00000525214 DCAF11Q8TEB1 546 aa10.11□□□□□ -0.79
COPB1-203ENST00000525214 ADAM11O75078 769 aa10.1□□□□□ -0.79
COPB1-203ENST00000525214 H2AFB1P0C5Y9 115 aa10.1□□□□□ -0.79
COPB1-203ENST00000525214 H2AFB2P0C5Z0 115 aa10.1□□□□□ -0.79
COPB1-203ENST00000525214 USPL1Q5W0Q7 1092 aa10.1□□□□□ -0.79
COPB1-203ENST00000525214 DZIP1LQ8IYY4 767 aaKnown RBP10.1□□□□□ -0.79
COPB1-203ENST00000525214 KLHL23Q8NBE8 558 aa10.1□□□□□ -0.79
COPB1-203ENST00000525214 FOXD4L4Q8WXT5 416 aaPredicted RBP10.1□□□□□ -0.79
COPB1-203ENST00000525214 KLHDC7BQ96G42 594 aa10.1□□□□□ -0.79
COPB1-203ENST00000525214 BHLHE41Q9C0J9 482 aaPredicted RBP10.1□□□□□ -0.79
COPB1-203ENST00000525214 GPR182O15218 404 aa10.09□□□□□ -0.79
COPB1-203ENST00000525214 DDX3YO15523 660 aaKnown RBP10.09□□□□□ -0.79
COPB1-203ENST00000525214 ORC1Q13415 861 aa10.09□□□□□ -0.79
COPB1-203ENST00000525214 HGSNATQ68CP4 663 aa10.09□□□□□ -0.79
COPB1-203ENST00000525214 FAM117BQ6P1L5 589 aa10.09□□□□□ -0.79
COPB1-203ENST00000525214 VN1R5Q7Z5H4 357 aa10.09□□□□□ -0.79
COPB1-203ENST00000525214 GALNT12Q8IXK2 581 aa10.09□□□□□ -0.79
COPB1-203ENST00000525214 SEC31BQ9NQW1 1179 aa10.09□□□□□ -0.79
COPB1-203ENST00000525214 CABP4P57796 275 aa10.08□□□□□ -0.8
COPB1-203ENST00000525214 PIP4K2BP78356 416 aa10.08□□□□□ -0.8
COPB1-203ENST00000525214 BSNDQ8WZ55 320 aa10.08□□□□□ -0.8
COPB1-203ENST00000525214 WNT8BQ93098 351 aa10.08□□□□□ -0.8
COPB1-203ENST00000525214 CITED4Q96RK1 184 aa10.08□□□□□ -0.8
COPB1-203ENST00000525214 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
COPB1-203ENST00000525214 METTL12A8MUP2 240 aa10.07□□□□□ -0.8
COPB1-203ENST00000525214 PDE3BQ13370 1112 aa10.07□□□□□ -0.8
COPB1-203ENST00000525214 A0A1W2PP55 124 aa10.06□□□□□ -0.8
COPB1-203ENST00000525214 KIAA1211Q6ZU35 1233 aa10.06□□□□□ -0.8
COPB1-203ENST00000525214 ACAD11Q709F0 780 aa10.06□□□□□ -0.8
COPB1-203ENST00000525214 UBASH3BQ8TF42 649 aa10.06□□□□□ -0.8
COPB1-203ENST00000525214 OSGEPQ9NPF4 335 aa10.06□□□□□ -0.8
COPB1-203ENST00000525214 SOX1O00570 391 aaPredicted RBP10.05□□□□□ -0.8
COPB1-203ENST00000525214 PRSS36Q5K4E3 855 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms