RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 KCNJ4P48050 445 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 ANGEL2Q5VTE6 544 aaKnown RBP8.31□□□□□ -1.08
NUP98-213ENST00000524563 CCDC102AQ96A19 550 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 CDCA5Q96FF9 252 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 CHMP4AQ9BY43 222 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 SEC31BQ9NQW1 1179 aa8.31□□□□□ -1.08
NUP98-213ENST00000524563 ZBED9Q6R2W3 1325 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 ZNF609O15014 1411 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 EGFRP00533 1210 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 PCCAP05165 728 aaPredicted RBP8.3□□□□□ -1.08
NUP98-213ENST00000524563 SLC10A3P09131 477 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 ATP2B4P23634 1241 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 CTSWP56202 376 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 SOX10P56693 466 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 FLIIQ13045 1269 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 RSBN1LQ6PCB5 846 aaPredicted RBP8.3□□□□□ -1.08
NUP98-213ENST00000524563 DLK2Q6UY11 383 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 CCDC191Q8NCU4 936 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 JARID2Q92833 1246 aaPredicted RBP8.3□□□□□ -1.08
NUP98-213ENST00000524563 SAGE1Q9NXZ1 904 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.3□□□□□ -1.08
NUP98-213ENST00000524563 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 MAP3K2Q9Y2U5 619 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 MED23Q9ULK4 1368 aa8.3□□□□□ -1.08
NUP98-213ENST00000524563 ASTN2O75129 1339 aaPredicted RBP8.29□□□□□ -1.08
NUP98-213ENST00000524563 KIAA0100Q14667 2235 aaKnown RBP8.29□□□□□ -1.08
NUP98-213ENST00000524563 PI4KAP2A4QPH2 592 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 USP17L3A6NCW0 530 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 USP17L4A6NCW7 530 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 TRPA1O75762 1119 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 USP17L8P0C7I0 530 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 IGHMBP2P38935 993 aaKnown RBP8.29□□□□□ -1.08
NUP98-213ENST00000524563 KIF23Q02241 960 aaPredicted RBP8.29□□□□□ -1.08
NUP98-213ENST00000524563 KSR2Q6VAB6 950 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 USP17L1Q7RTZ2 530 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 RASAL3Q86YV0 1011 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 OGFOD1Q8N543 542 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 PI4KAP1Q8N8J0 262 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 AGBL3Q8NEM8 1001 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 CNKSR2Q8WXI2 1034 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 ZIC5Q96T25 663 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
NUP98-213ENST00000524563 MYOZ2Q9NPC6 264 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 KCNQ5Q9NR82 932 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 TSHZ2Q9NRE2 1034 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 HDAC9Q9UKV0 1011 aa8.29□□□□□ -1.08
NUP98-213ENST00000524563 RBBP6Q7Z6E9 1792 aaKnown RBP8.29□□□□□ -1.08
NUP98-213ENST00000524563 IGKV5-2P06315 115 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 VIL1P09327 827 aaKnown RBP8.28□□□□□ -1.08
NUP98-213ENST00000524563 MKRN3Q13064 507 aaKnown RBP8.28□□□□□ -1.08
NUP98-213ENST00000524563 FKBP5Q13451 457 aaPredicted RBP8.28□□□□□ -1.08
NUP98-213ENST00000524563 SCARF1Q14162 830 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 UBE3BQ7Z3V4 1068 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 MRPL50Q8N5N7 158 aaKnown RBP8.28□□□□□ -1.08
NUP98-213ENST00000524563 SSH1Q8WYL5 1049 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 PODXL2Q9NZ53 605 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 CHMP3Q9Y3E7 222 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 MYO3BQ8WXR4 1341 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 PITPNM2Q9BZ72 1349 aa8.28□□□□□ -1.08
NUP98-213ENST00000524563 COL1A1P02452 1464 aaPredicted RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 FAM155AB1AL88 458 aaPredicted RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 F6X3S4 739 aa8.27□□□□□ -1.09
NUP98-213ENST00000524563 SASH1O94885 1247 aa8.27□□□□□ -1.09
NUP98-213ENST00000524563 FKBP1BP68106 108 aa8.27□□□□□ -1.09
NUP98-213ENST00000524563 TRIM28Q13263 835 aaKnown RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 MAPK8IP2Q13387 824 aaPredicted RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 CWF19L2Q2TBE0 894 aaKnown RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 CTU1Q7Z7A3 348 aaKnown RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 APOBEC3FQ8IUX4 373 aaKnown RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 DNAAF4Q8WXU2 420 aa8.27□□□□□ -1.09
NUP98-213ENST00000524563 MPHOSPH8Q99549 860 aa8.27□□□□□ -1.09
NUP98-213ENST00000524563 RNF186Q9NXI6 227 aa8.27□□□□□ -1.09
NUP98-213ENST00000524563 SCAF8Q9UPN6 1271 aaKnown RBP8.27□□□□□ -1.09
NUP98-213ENST00000524563 NEURL1BA8MQ27 555 aa8.26□□□□□ -1.09
NUP98-213ENST00000524563 ZNF280AP59817 542 aaPredicted RBP8.26□□□□□ -1.09
NUP98-213ENST00000524563 SREBF2Q12772 1141 aa8.26□□□□□ -1.09
NUP98-213ENST00000524563 PRKG1Q13976 671 aa8.26□□□□□ -1.09
NUP98-213ENST00000524563 ALDH1L2Q3SY69 923 aa8.26□□□□□ -1.09
NUP98-213ENST00000524563 ARMC9Q7Z3E5 817 aa8.26□□□□□ -1.09
NUP98-213ENST00000524563 REM2Q8IYK8 340 aaPredicted RBP8.26□□□□□ -1.09
NUP98-213ENST00000524563 GREM2Q9H772 168 aa8.26□□□□□ -1.09
NUP98-213ENST00000524563 SLC34A2O95436 690 aa8.25□□□□□ -1.09
NUP98-213ENST00000524563 CT47B1P0C2W7 299 aaPredicted RBP8.25□□□□□ -1.09
NUP98-213ENST00000524563 CCT4P50991 539 aaKnown RBP8.25□□□□□ -1.09
NUP98-213ENST00000524563 TAF7LQ5H9L4 462 aa8.25□□□□□ -1.09
NUP98-213ENST00000524563 ERICH6BQ5W0A0 696 aa8.25□□□□□ -1.09
NUP98-213ENST00000524563 PODNQ7Z5L7 613 aa8.25□□□□□ -1.09
NUP98-213ENST00000524563 SMC4Q9NTJ3 1288 aa8.25□□□□□ -1.09
NUP98-213ENST00000524563 PTPRCP08575 1304 aa8.25□□□□□ -1.09
NUP98-213ENST00000524563 DOCK2Q92608 1830 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 UBE2Q2LH0YL09 131 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 MYO1BO43795 1136 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 RARSP54136 660 aaKnown RBP8.24□□□□□ -1.09
NUP98-213ENST00000524563 NBPF9Q3BBW0 867 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 BEND3Q5T5X7 828 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 PRAMEF18Q5VWM3 479 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 MOB2Q70IA6 237 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 KIAA0825Q8IV33 1275 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 LINS1Q8NG48 757 aa8.24□□□□□ -1.09
NUP98-213ENST00000524563 MXD3Q9BW11 206 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms