RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 METTL22Q9BUU2 404 aaPredicted RBP8.75□□□□□ -1.01
VPS11-201ENST00000524454 SRCIN1Q9C0H9 1055 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 CRISPLD2Q9H0B8 497 aa8.75□□□□□ -1.01
VPS11-201ENST00000524454 SNED1Q8TER0 1413 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 C2orf72A6NCS6 295 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 F6X3S4 739 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 IRS4O14654 1257 aaPredicted RBP8.74□□□□□ -1.01
VPS11-201ENST00000524454 HOXA10P31260 410 aaPredicted RBP8.74□□□□□ -1.01
VPS11-201ENST00000524454 RGS3P49796 1198 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 C1QTNF8P60827 252 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 MTX1Q13505 466 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 KSR2Q6VAB6 950 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 DNAAF4Q8WXU2 420 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 CRAMP1Q96RY5 1269 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 RRAGCQ9HB90 399 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 CWC25Q9NXE8 425 aaPredicted RBP8.74□□□□□ -1.01
VPS11-201ENST00000524454 UTYO14607 1347 aa8.74□□□□□ -1.01
VPS11-201ENST00000524454 FKBP4Q02790 459 aaKnown RBP eCLIP8.73□□□□□ -1.01
VPS11-201ENST00000524454 BEND3Q5T5X7 828 aa8.73□□□□□ -1.01
VPS11-201ENST00000524454 SOGA3Q5TF21 947 aa8.73□□□□□ -1.01
VPS11-201ENST00000524454 DDX46Q7L014 1031 aaKnown RBP8.73□□□□□ -1.01
VPS11-201ENST00000524454 LINS1Q8NG48 757 aa8.73□□□□□ -1.01
VPS11-201ENST00000524454 CELF1Q92879 486 aaKnown RBP8.73□□□□□ -1.01
VPS11-201ENST00000524454 IPO9Q96P70 1041 aaKnown RBP8.73□□□□□ -1.01
VPS11-201ENST00000524454 MEIS3Q99687 375 aa8.73□□□□□ -1.01
VPS11-201ENST00000524454 UPF2Q9HAU5 1272 aaKnown RBP8.73□□□□□ -1.01
VPS11-201ENST00000524454 SEC31BQ9NQW1 1179 aa8.73□□□□□ -1.01
VPS11-201ENST00000524454 LTBP3Q9NS15 1303 aa8.73□□□□□ -1.01
VPS11-201ENST00000524454 DUOX1Q9NRD9 1551 aa8.73□□□□□ -1.01
VPS11-201ENST00000524454 WDR90Q96KV7 1748 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 NEURL1BA8MQ27 555 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 PCCAP05165 728 aaPredicted RBP8.72□□□□□ -1.01
VPS11-201ENST00000524454 UBTFL1P0CB47 393 aaPredicted RBP8.72□□□□□ -1.01
VPS11-201ENST00000524454 TRIM28Q13263 835 aaKnown RBP8.72□□□□□ -1.01
VPS11-201ENST00000524454 GRAPQ13588 217 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 HSP90AB4PQ58FF6 505 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 RTKN2Q8IZC4 609 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 ZBTB38Q8NAP3 1195 aaPredicted RBP8.72□□□□□ -1.01
VPS11-201ENST00000524454 CCDC191Q8NCU4 936 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 GRAPLQ8TC17 118 aaPredicted RBP8.72□□□□□ -1.01
VPS11-201ENST00000524454 OSBPL3Q9H4L5 887 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 AOX1Q06278 1338 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 ZNF541Q9H0D2 1346 aa8.72□□□□□ -1.01
VPS11-201ENST00000524454 LTBP1Q14766 1721 aa8.71□□□□□ -1.01
VPS11-201ENST00000524454 RAB11FIP3O75154 756 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 DDNO94850 711 aaPredicted RBP8.71□□□□□ -1.02
VPS11-201ENST00000524454 IARSP41252 1262 aaKnown RBP8.71□□□□□ -1.02
VPS11-201ENST00000524454 ATP8B2P98198 1209 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 NEXNQ0ZGT2 675 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 AOC3Q16853 763 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 SLC4A10Q6U841 1118 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 UBE3BQ7Z3V4 1068 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 IL27Q8NEV9 243 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 SSH3Q8TE77 659 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 GPR101Q96P66 508 aaPredicted RBP8.71□□□□□ -1.02
VPS11-201ENST00000524454 USP44Q9H0E7 712 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 GPHNQ9NQX3 736 aaPredicted RBP8.71□□□□□ -1.02
VPS11-201ENST00000524454 ATP6V0A2Q9Y487 856 aa8.71□□□□□ -1.02
VPS11-201ENST00000524454 GLTPD2A6NH11 291 aa8.7□□□□□ -1.02
VPS11-201ENST00000524454 PDE8AO60658 829 aa8.7□□□□□ -1.02
VPS11-201ENST00000524454 CTSWP56202 376 aa8.7□□□□□ -1.02
VPS11-201ENST00000524454 GPSM2P81274 684 aa8.7□□□□□ -1.02
VPS11-201ENST00000524454 SF3B3Q15393 1217 aaKnown RBP8.7□□□□□ -1.02
VPS11-201ENST00000524454 PSMD1Q99460 953 aa8.7□□□□□ -1.02
VPS11-201ENST00000524454 A0A1B0GUL6 1792 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 POTECB2RU33 542 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 PPIP5K2O43314 1243 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 BBOX1O75936 387 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 GCKRQ14397 625 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 ANKRD45Q5TZF3 282 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 DPP8Q6V1X1 898 aaPredicted RBP8.69□□□□□ -1.02
VPS11-201ENST00000524454 SP8Q8IXZ3 490 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 C16orf71Q8IYS4 520 aaPredicted RBP8.69□□□□□ -1.02
VPS11-201ENST00000524454 LARGE2Q8N3Y3 721 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 MPNDQ8N594 471 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 TMC2Q8TDI7 906 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 GREM2Q9H772 168 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 CDHR2Q9BYE9 1310 aa8.69□□□□□ -1.02
VPS11-201ENST00000524454 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
VPS11-201ENST00000524454 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
VPS11-201ENST00000524454 H7C1W4 665 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 RIMBP2O15034 1052 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 EPB41L2O43491 1005 aaKnown RBP8.68□□□□□ -1.02
VPS11-201ENST00000524454 CASP7P55210 303 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 DSG2Q14126 1118 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 MFSD10Q14728 455 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 CCDC152Q4G0S7 254 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 CC2D2BQ6DHV5 1058 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 ERC1Q8IUD2 1116 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 TBC1D32Q96NH3 1257 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 LRRCC1Q9C099 1032 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 LNPKQ9C0E8 428 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 TMX4Q9H1E5 349 aaPredicted RBP8.68□□□□□ -1.02
VPS11-201ENST00000524454 C1orf115Q9H7X2 142 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 NSFL1CQ9UNZ2 370 aaKnown RBP8.68□□□□□ -1.02
VPS11-201ENST00000524454 NOP58Q9Y2X3 529 aaKnown RBP8.68□□□□□ -1.02
VPS11-201ENST00000524454 GJA3Q9Y6H8 435 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 SALL3Q9BXA9 1300 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 SCN4AP35499 1836 aa8.68□□□□□ -1.02
VPS11-201ENST00000524454 GRM8O00222 908 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms