RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-225ENST00000524141 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 KCNG4Q8TDN1 519 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 EDC3Q96F86 508 aaKnown RBP11.94□□□□□ -0.5
SPIDR-225ENST00000524141 HAUS7Q99871 368 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 NOL10Q9BSC4 688 aaKnown RBP11.94□□□□□ -0.5
SPIDR-225ENST00000524141 SRRTQ9BXP5 876 aaKnown RBP11.94□□□□□ -0.5
SPIDR-225ENST00000524141 ZNF446Q9NWS9 450 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.94□□□□□ -0.52e-6■■■■□ 25.9
SPIDR-225ENST00000524141 SETD1BQ9UPS6 1966 aaKnown RBP11.94□□□□□ -0.5
SPIDR-225ENST00000524141 ARHGAP23Q9P227 1491 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 SIPA1L3O60292 1781 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-225ENST00000524141 PHLPP2Q6ZVD8 1323 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 SYT10Q6XYQ8 523 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 ZNF274Q96GC6 653 aaPredicted RBP11.94□□□□□ -0.5
SPIDR-225ENST00000524141 DSCC1Q9BVC3 393 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
SPIDR-225ENST00000524141 PCDHA7Q9UN72 937 aa11.94□□□□□ -0.5
SPIDR-225ENST00000524141 LMTK3Q96Q04 1460 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 IGKV5-2P06315 115 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 ERCC6LQ2NKX8 1250 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 TMC6Q7Z403 805 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 KCNH5Q8NCM2 988 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 LRRC2Q9BYS8 371 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
SPIDR-225ENST00000524141 IFNKQ9P0W0 207 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 RGPD2P0DJD1 1756 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 CARMIL3Q8ND23 1372 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 NEURL1BA8MQ27 555 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 YEATS4O95619 227 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 APOBRQ0VD83 1088 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 GCKRQ14397 625 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 ARMCX5Q6P1M9 558 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 KLHDC4Q8TBB5 520 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 DNAJC2Q99543 621 aaKnown RBP11.93□□□□□ -0.5
SPIDR-225ENST00000524141 PALLDQ8WX93 1383 aa11.93□□□□□ -0.5
SPIDR-225ENST00000524141 TPM1P09493 284 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 CLCN6P51797 869 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 ETF1P62495 437 aaKnown RBP11.92□□□□□ -0.5
SPIDR-225ENST00000524141 EXOSC10Q01780 885 aaKnown RBP11.92□□□□□ -0.5
SPIDR-225ENST00000524141 AIMP1Q12904 312 aaKnown RBP11.92□□□□□ -0.5
SPIDR-225ENST00000524141 SF3A1Q15459 793 aaKnown RBP11.92□□□□□ -0.5
SPIDR-225ENST00000524141 CCDC129Q6ZRS4 1044 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 STOX1Q6ZVD7 989 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 HOMER1Q86YM7 354 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 KBTBD3Q8NAB2 608 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 HELLSQ9NRZ9 838 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 FHOD1Q9Y613 1164 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.92□□□□□ -0.5
SPIDR-225ENST00000524141 FOSBP53539 338 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 STK38Q15208 465 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 DPCR1Q3MIW9 517 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 ARHGAP29Q52LW3 1261 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 UBXN4Q92575 508 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 POLR3EQ9NVU0 708 aa11.92□□□□□ -0.5
SPIDR-225ENST00000524141 PXDNQ92626 1479 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 IKBKBO14920 756 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 SLC3A2P08195 630 aaKnown RBP11.91□□□□□ -0.5
SPIDR-225ENST00000524141 PNMA6AP0CW24 399 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-225ENST00000524141 CYP2C19P33261 490 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 NLRP12P59046 1061 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 TEX35Q5T0J7 233 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 TMCO3Q6UWJ1 677 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
SPIDR-225ENST00000524141 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 A0A087WWV3 80 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 A0A1B0GVL5 298 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 NPHP1O15259 732 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 ATP8B1O43520 1251 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 NDUFA8P51970 172 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 CCT2P78371 535 aaKnown RBP11.91□□□□□ -0.5
SPIDR-225ENST00000524141 TFCP2Q12800 502 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 CYB5RLQ6IPT4 315 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 BRAPQ7Z569 592 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 FBXL16Q8N461 479 aa11.91□□□□□ -0.5
SPIDR-225ENST00000524141 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
SPIDR-225ENST00000524141 CBFA2T2O43439 604 aa11.9□□□□□ -0.5
SPIDR-225ENST00000524141 PDIA3P30101 505 aaKnown RBP11.9□□□□□ -0.5
SPIDR-225ENST00000524141 PTPN12Q05209 780 aaKnown RBP11.9□□□□□ -0.5
SPIDR-225ENST00000524141 FBXW7Q969H0 707 aa11.9□□□□□ -0.5
SPIDR-225ENST00000524141 METTL22Q9BUU2 404 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-225ENST00000524141 DHX16O60231 1041 aaKnown RBP11.9□□□□□ -0.5
SPIDR-225ENST00000524141 CDK11BP21127 795 aaKnown RBP11.9□□□□□ -0.5
SPIDR-225ENST00000524141 PDIA6Q15084 440 aa11.9□□□□□ -0.5
SPIDR-225ENST00000524141 FCHSD1Q86WN1 690 aa11.9□□□□□ -0.5
SPIDR-225ENST00000524141 MNS1Q8NEH6 495 aa11.9□□□□□ -0.5
SPIDR-225ENST00000524141 NAP1L2Q9ULW6 460 aaPredicted RBP11.9□□□□□ -0.5
SPIDR-225ENST00000524141 PRAMEF22A3QJZ6 481 aa11.9□□□□□ -0.51
SPIDR-225ENST00000524141 E7EWF7 191 aa11.9□□□□□ -0.51
SPIDR-225ENST00000524141 MYO1BO43795 1136 aa11.9□□□□□ -0.51
SPIDR-225ENST00000524141 RFX5P48382 616 aaPredicted RBP11.9□□□□□ -0.51
SPIDR-225ENST00000524141 PSME1Q06323 249 aa11.9□□□□□ -0.51
SPIDR-225ENST00000524141 RABL6Q3YEC7 729 aaPredicted RBP11.9□□□□□ -0.51
SPIDR-225ENST00000524141 DDX46Q7L014 1031 aaKnown RBP11.9□□□□□ -0.51
SPIDR-225ENST00000524141 ERCC4Q92889 916 aaPredicted RBP11.9□□□□□ -0.51
SPIDR-225ENST00000524141 NCOA5Q9HCD5 579 aaKnown RBP11.9□□□□□ -0.51
SPIDR-225ENST00000524141 ORC3Q9UBD5 711 aaPredicted RBP11.9□□□□□ -0.51
SPIDR-225ENST00000524141 PHF8Q9UPP1 1060 aa11.9□□□□□ -0.51
SPIDR-225ENST00000524141 ADAMTS7Q9UKP4 1686 aa11.89□□□□□ -0.51
SPIDR-225ENST00000524141 ERICH4A6NGS2 130 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms