RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 MIER1Q8N108 512 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 OTUD5Q96G74 571 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 FAM89AQ96GI7 184 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
LAMA4-220ENST00000523765 PTPN22Q9Y2R2 807 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 ERBB4Q15303 1308 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 PITPNM2Q9BZ72 1349 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 UNC80Q8N2C7 3258 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 TRIOBPQ9H2D6 2365 aa12.78□□□□□ -0.36
LAMA4-220ENST00000523765 LAMA3Q16787 3333 aa12.77□□□□□ -0.36
LAMA4-220ENST00000523765 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.36
LAMA4-220ENST00000523765 IGF2BP3O00425 579 aaKnown RBP eCLIP12.77□□□□□ -0.37
LAMA4-220ENST00000523765 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
LAMA4-220ENST00000523765 CD99L2Q8TCZ2 262 aa12.77□□□□□ -0.37
LAMA4-220ENST00000523765 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.37
LAMA4-220ENST00000523765 CFAP53Q96M91 514 aa12.77□□□□□ -0.37
LAMA4-220ENST00000523765 SEC31BQ9NQW1 1179 aa12.77□□□□□ -0.37
LAMA4-220ENST00000523765 H0YGN5 161 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 UFL1O94874 794 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 USP17L8P0C7I0 530 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 SREBF2Q12772 1141 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 SPRYD7Q5W111 196 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 INTS3Q68E01 1043 aaKnown RBP12.76□□□□□ -0.37
LAMA4-220ENST00000523765 AGBL3Q8NEM8 1001 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 EYA3Q99504 573 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 ZC3H12CQ9C0D7 883 aaKnown RBP12.76□□□□□ -0.37
LAMA4-220ENST00000523765 NUDCQ9Y266 331 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 SPEF2Q9C093 1822 aa12.76□□□□□ -0.37
LAMA4-220ENST00000523765 ATP5J2-PTCD1G3V325 749 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 CEP290O15078 2479 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 PPP2R1AP30153 589 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 KRT24Q2M2I5 525 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 IFNL1Q8IU54 200 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 ARMC5Q96C12 935 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 PLEKHF1Q96S99 279 aa12.75□□□□□ -0.37
LAMA4-220ENST00000523765 SSC5DA1L4H1 1573 aa12.74□□□□□ -0.37
LAMA4-220ENST00000523765 SASH1O94885 1247 aa12.74□□□□□ -0.37
LAMA4-220ENST00000523765 RPS8P62241 208 aaKnown RBP12.74□□□□□ -0.37
LAMA4-220ENST00000523765 HSP90AB3PQ58FF7 597 aa12.74□□□□□ -0.37
LAMA4-220ENST00000523765 LDLRAD1Q5T700 205 aa12.74□□□□□ -0.37
LAMA4-220ENST00000523765 CLMNQ96JQ2 1002 aa12.74□□□□□ -0.37
LAMA4-220ENST00000523765 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
LAMA4-220ENST00000523765 WNT10BO00744 389 aa12.73□□□□□ -0.37
LAMA4-220ENST00000523765 MYCP01106 439 aaPredicted RBP12.73□□□□□ -0.37
LAMA4-220ENST00000523765 ISCA1Q9BUE6 129 aa12.73□□□□□ -0.37
LAMA4-220ENST00000523765 TSPYL4Q9UJ04 414 aa12.73□□□□□ -0.37
LAMA4-220ENST00000523765 G3V3G9 751 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 GJA5P36382 358 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 CRHR2Q13324 411 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 DCAF8Q5TAQ9 597 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 SLC17A8Q8NDX2 589 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 ZNF333Q96JL9 665 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 ANKIB1Q9P2G1 1089 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 RBM27Q9P2N5 1060 aaKnown RBP12.72□□□□□ -0.37
LAMA4-220ENST00000523765 GGA1Q9UJY5 639 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 ANGEL1Q9UNK9 670 aaKnown RBP12.72□□□□□ -0.37
LAMA4-220ENST00000523765 OTOFQ9HC10 1997 aa12.72□□□□□ -0.37
LAMA4-220ENST00000523765 USP17L3A6NCW0 530 aa12.71□□□□□ -0.37
LAMA4-220ENST00000523765 USP17L4A6NCW7 530 aa12.71□□□□□ -0.37
LAMA4-220ENST00000523765 USP17L1Q7RTZ2 530 aa12.71□□□□□ -0.37
LAMA4-220ENST00000523765 ZNF579Q8NAF0 562 aaKnown RBP12.71□□□□□ -0.37
LAMA4-220ENST00000523765 WNK4Q96J92 1243 aa12.71□□□□□ -0.37
LAMA4-220ENST00000523765 PTPN18Q99952 460 aa12.71□□□□□ -0.37
LAMA4-220ENST00000523765 IRS4O14654 1257 aaPredicted RBP12.7□□□□□ -0.38
LAMA4-220ENST00000523765 DACT2Q5SW24 774 aa12.7□□□□□ -0.38
LAMA4-220ENST00000523765 JARID2Q92833 1246 aaPredicted RBP12.7□□□□□ -0.38
LAMA4-220ENST00000523765 CCDC85AQ96PX6 553 aaPredicted RBP12.7□□□□□ -0.38
LAMA4-220ENST00000523765 EFCC1Q9HA90 598 aa12.7□□□□□ -0.38
LAMA4-220ENST00000523765 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
LAMA4-220ENST00000523765 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
LAMA4-220ENST00000523765 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
LAMA4-220ENST00000523765 ALDH1A1P00352 501 aa12.69□□□□□ -0.38
LAMA4-220ENST00000523765 ARMC9Q7Z3E5 817 aa12.69□□□□□ -0.38
LAMA4-220ENST00000523765 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
LAMA4-220ENST00000523765 ECM29Q5VYK3 1845 aa12.69□□□□□ -0.38
LAMA4-220ENST00000523765 AOX1Q06278 1338 aa12.68□□□□□ -0.38
LAMA4-220ENST00000523765 MANSC4A6NHS7 340 aaPredicted RBP12.68□□□□□ -0.38
LAMA4-220ENST00000523765 NF2P35240 595 aa12.68□□□□□ -0.38
LAMA4-220ENST00000523765 VASPP50552 380 aaPredicted RBP12.68□□□□□ -0.38
LAMA4-220ENST00000523765 TXNRD3Q86VQ6 643 aa12.68□□□□□ -0.38
LAMA4-220ENST00000523765 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
LAMA4-220ENST00000523765 ZBED3Q96IU2 234 aaPredicted RBP12.68□□□□□ -0.38
LAMA4-220ENST00000523765 TMEM106CQ9BVX2 250 aa12.68□□□□□ -0.38
LAMA4-220ENST00000523765 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
LAMA4-220ENST00000523765 SP3Q02447 781 aa12.67□□□□□ -0.38
LAMA4-220ENST00000523765 PODNQ7Z5L7 613 aa12.67□□□□□ -0.38
LAMA4-220ENST00000523765 FBXW7Q969H0 707 aa12.67□□□□□ -0.38
LAMA4-220ENST00000523765 SHISA4Q96DD7 197 aa12.67□□□□□ -0.38
LAMA4-220ENST00000523765 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
LAMA4-220ENST00000523765 PRO3102Q9H379 93 aa12.67□□□□□ -0.38
LAMA4-220ENST00000523765 XDHP47989 1333 aa12.66□□□□□ -0.38
LAMA4-220ENST00000523765 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
LAMA4-220ENST00000523765 ANKRD13DQ6ZTN6 518 aa12.66□□□□□ -0.38
LAMA4-220ENST00000523765 SH3TC2Q8TF17 1288 aa12.66□□□□□ -0.38
LAMA4-220ENST00000523765 ZBTB48P10074 688 aaPredicted RBP12.65□□□□□ -0.38
LAMA4-220ENST00000523765 KLRK1P26718 216 aa12.65□□□□□ -0.38
LAMA4-220ENST00000523765 INHBEP58166 350 aa12.65□□□□□ -0.38
LAMA4-220ENST00000523765 MAP3K11Q16584 847 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms