RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 CHRNDQ07001 517 aa14.75□□□□□ -0.05
PVT1-215ENST00000522963 SMC5Q8IY18 1101 aa14.75□□□□□ -0.05
PVT1-215ENST00000522963 VPS33BQ9H267 617 aa14.75□□□□□ -0.05
PVT1-215ENST00000522963 PODXL2Q9NZ53 605 aa14.75□□□□□ -0.05
PVT1-215ENST00000522963 ZNRF3Q9ULT6 936 aa14.75□□□□□ -0.05
PVT1-215ENST00000522963 TAF5LO75529 589 aa14.74□□□□□ -0.05
PVT1-215ENST00000522963 RAD17O75943 681 aa14.74□□□□□ -0.05
PVT1-215ENST00000522963 SASH1O94885 1247 aa14.74□□□□□ -0.05
PVT1-215ENST00000522963 VEGFAP15692 232 aaPredicted RBP14.74□□□□□ -0.05
PVT1-215ENST00000522963 IL15P40933 162 aaPredicted RBP14.74□□□□□ -0.05
PVT1-215ENST00000522963 OS9Q13438 667 aaPredicted RBP14.74□□□□□ -0.05
PVT1-215ENST00000522963 HSP90AB4PQ58FF6 505 aa14.74□□□□□ -0.05
PVT1-215ENST00000522963 GCC1Q96CN9 775 aa14.74□□□□□ -0.05
PVT1-215ENST00000522963 ANKRD2Q9GZV1 360 aa14.74□□□□□ -0.05
PVT1-215ENST00000522963 LTBP1Q14766 1721 aa14.73□□□□□ -0.05
PVT1-215ENST00000522963 APBB1O00213 710 aa14.73□□□□□ -0.05
PVT1-215ENST00000522963 ECE2O60344 883 aa14.73□□□□□ -0.05
PVT1-215ENST00000522963 RAB11FIP3O75154 756 aa14.73□□□□□ -0.05
PVT1-215ENST00000522963 CENPQQ7L2Z9 268 aaPredicted RBP14.73□□□□□ -0.05
PVT1-215ENST00000522963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.73□□□□□ -0.05
PVT1-215ENST00000522963 YDJCA8MPS7 323 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 SNAP23O00161 211 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 CXCL9Q07325 125 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 TFCP2Q12800 502 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 METTL24Q5JXM2 366 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 CIAPIN1Q6FI81 312 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 GPC2Q8N158 579 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 RHPN1Q8TCX5 695 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 WDR90Q96KV7 1748 aa14.72□□□□□ -0.05
PVT1-215ENST00000522963 ZNF804BA4D1E1 1349 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 MROH5Q6ZUA9 1318 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 POTECB2RU33 542 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
PVT1-215ENST00000522963 C1QTNF8P60827 252 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 FBXW7Q969H0 707 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 KIF1BPQ96EK5 621 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 CEP126Q9P2H0 1117 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 LEMD3Q9Y2U8 911 aa14.71□□□□□ -0.05
PVT1-215ENST00000522963 IQCA1LA6NCM1 817 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 KLRK1P26718 216 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 LMOD1P29536 600 aaPredicted RBP14.7□□□□□ -0.06
PVT1-215ENST00000522963 TNIP1Q15025 636 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 EAPPQ56P03 285 aaPredicted RBP14.7□□□□□ -0.06
PVT1-215ENST00000522963 ANKRD45Q5TZF3 282 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 LRRCC1Q9C099 1032 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 IL1RAPL2Q9NP60 686 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 KCNQ5Q9NR82 932 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
PVT1-215ENST00000522963 PSMD14O00487 310 aa14.69□□□□□ -0.06
PVT1-215ENST00000522963 TOMM70O94826 608 aa14.69□□□□□ -0.06
PVT1-215ENST00000522963 PDE8BO95263 885 aa14.69□□□□□ -0.06
PVT1-215ENST00000522963 NUCB1Q02818 461 aa14.69□□□□□ -0.06
PVT1-215ENST00000522963 TXNRD3Q86VQ6 643 aa14.69□□□□□ -0.06
PVT1-215ENST00000522963 L3MBTL3Q96JM7 780 aaPredicted RBP14.69□□□□□ -0.06
PVT1-215ENST00000522963 A0A1B0GUL6 1792 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 SCN9AQ15858 1988 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 EPHX2P34913 555 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 GMPSP49915 693 aaPredicted RBP14.68□□□□□ -0.06
PVT1-215ENST00000522963 CHD1LQ86WJ1 897 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 BCL11AQ9H165 835 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 CLEC11AQ9Y240 323 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
PVT1-215ENST00000522963 MED23Q9ULK4 1368 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 SCN4AP35499 1836 aa14.68□□□□□ -0.06
PVT1-215ENST00000522963 FGFR2P21802 821 aa14.67□□□□□ -0.06
PVT1-215ENST00000522963 EPS15P42566 896 aa14.67□□□□□ -0.06
PVT1-215ENST00000522963 PUM3Q15397 648 aaKnown RBP14.67□□□□□ -0.06
PVT1-215ENST00000522963 TNNI3KQ59H18 835 aa14.67□□□□□ -0.06
PVT1-215ENST00000522963 EAF2Q96CJ1 260 aaPredicted RBP14.67□□□□□ -0.06
PVT1-215ENST00000522963 LNPKQ9C0E8 428 aa14.67□□□□□ -0.06
PVT1-215ENST00000522963 TAF1DQ9H5J8 278 aaPredicted RBP14.67□□□□□ -0.06
PVT1-215ENST00000522963 GPR108Q9NPR9 543 aa14.67□□□□□ -0.06
PVT1-215ENST00000522963 FPGT-TNNI3KV9GXZ4 949 aa14.67□□□□□ -0.06
PVT1-215ENST00000522963 POTEIP0CG38 1075 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 POTEJP0CG39 1038 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 SCNN1DP51172 638 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 TIMM10P62072 90 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 ATP2B3Q16720 1220 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 CLASRPQ8N2M8 674 aaKnown RBP14.66□□□□□ -0.06
PVT1-215ENST00000522963 RBM46Q8TBY0 533 aaKnown RBP14.66□□□□□ -0.06
PVT1-215ENST00000522963 COA1Q9GZY4 146 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 AKAP2Q9Y2D5 859 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 ZNF609O15014 1411 aa14.66□□□□□ -0.06
PVT1-215ENST00000522963 A0A1B0GUL7 405 aa14.65□□□□□ -0.06
PVT1-215ENST00000522963 UBE4AQ14139 1066 aa14.65□□□□□ -0.06
PVT1-215ENST00000522963 PODNQ7Z5L7 613 aa14.65□□□□□ -0.06
PVT1-215ENST00000522963 AACSQ86V21 672 aa14.65□□□□□ -0.06
PVT1-215ENST00000522963 SMC1BQ8NDV3 1235 aa14.65□□□□□ -0.06
PVT1-215ENST00000522963 LPIN2Q92539 896 aa14.65□□□□□ -0.06
PVT1-215ENST00000522963 CCDC8Q9H0W5 538 aaPredicted RBP14.65□□□□□ -0.06
PVT1-215ENST00000522963 TLR7Q9NYK1 1049 aaKnown RBP14.65□□□□□ -0.06
PVT1-215ENST00000522963 GPRC5DQ9NZD1 345 aa14.65□□□□□ -0.06
PVT1-215ENST00000522963 ZBTB47Q9UFB7 747 aaPredicted RBP14.65□□□□□ -0.06
PVT1-215ENST00000522963 SHTN1A0MZ66 631 aa14.64□□□□□ -0.07
PVT1-215ENST00000522963 USP17L3A6NCW0 530 aa14.64□□□□□ -0.07
PVT1-215ENST00000522963 USP17L4A6NCW7 530 aa14.64□□□□□ -0.07
PVT1-215ENST00000522963 SLC5A1P13866 664 aa14.64□□□□□ -0.07
PVT1-215ENST00000522963 PDE4AP27815 886 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms