RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 CAPNS2Q96L46 248 aa14.58□□□□□ -0.08
CSMD1-210ENST00000521646 TNRC18O15417 2968 aaPredicted RBP14.57□□□□□ -0.08
CSMD1-210ENST00000521646 RAD17O75943 681 aa14.57□□□□□ -0.08
CSMD1-210ENST00000521646 PPP1R42Q7Z4L9 355 aa14.57□□□□□ -0.08
CSMD1-210ENST00000521646 NLRP3Q96P20 1036 aa14.57□□□□□ -0.08
CSMD1-210ENST00000521646 KCNQ5Q9NR82 932 aa14.57□□□□□ -0.08
CSMD1-210ENST00000521646 TLL2Q9Y6L7 1015 aa14.57□□□□□ -0.08
CSMD1-210ENST00000521646 MAPK8IP3Q9UPT6 1336 aa14.57□□□□□ -0.08
CSMD1-210ENST00000521646 SCN9AQ15858 1988 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 TK2O00142 265 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 CHL1O00533 1208 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 KIAA2012Q0VF49 1180 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 GRM1Q13255 1194 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 TCIRG1Q13488 830 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 USP50Q70EL3 339 aaPredicted RBP14.56□□□□□ -0.08
CSMD1-210ENST00000521646 CELF1Q92879 486 aaKnown RBP14.56□□□□□ -0.08
CSMD1-210ENST00000521646 GPR101Q96P66 508 aaPredicted RBP14.56□□□□□ -0.08
CSMD1-210ENST00000521646 CHPF2Q9P2E5 772 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 PGAP2Q9UHJ9 254 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 ZNRF3Q9ULT6 936 aa14.56□□□□□ -0.08
CSMD1-210ENST00000521646 LMOD1P29536 600 aaPredicted RBP14.55□□□□□ -0.08
CSMD1-210ENST00000521646 TYW1BQ6NUM6 668 aa14.55□□□□□ -0.08
CSMD1-210ENST00000521646 SAPCD2Q86UD0 394 aa14.55□□□□□ -0.08
CSMD1-210ENST00000521646 SP8Q8IXZ3 490 aa14.55□□□□□ -0.08
CSMD1-210ENST00000521646 DDX12PQ92771 950 aa14.55□□□□□ -0.08
CSMD1-210ENST00000521646 ABHD8Q96I13 439 aa14.55□□□□□ -0.08
CSMD1-210ENST00000521646 ADARB2Q9NS39 739 aaKnown RBP14.55□□□□□ -0.08
CSMD1-210ENST00000521646 PLCB2Q00722 1185 aa14.54□□□□□ -0.08
CSMD1-210ENST00000521646 GRAPQ13588 217 aa14.54□□□□□ -0.08
CSMD1-210ENST00000521646 NEUROD2Q15784 382 aa14.54□□□□□ -0.08
CSMD1-210ENST00000521646 GRAPLQ8TC17 118 aaPredicted RBP14.54□□□□□ -0.08
CSMD1-210ENST00000521646 AIDAQ96BJ3 306 aa14.54□□□□□ -0.08
CSMD1-210ENST00000521646 RTL9Q8NET4 1388 aa14.54□□□□□ -0.08
CSMD1-210ENST00000521646 SPDYE16A6NNV3 312 aaPredicted RBP14.53□□□□□ -0.08
CSMD1-210ENST00000521646 ATP5J2-PTCD1G3V325 749 aa14.53□□□□□ -0.08
CSMD1-210ENST00000521646 CELF2O95319 508 aaKnown RBP14.53□□□□□ -0.08
CSMD1-210ENST00000521646 DPP8Q6V1X1 898 aaPredicted RBP14.53□□□□□ -0.08
CSMD1-210ENST00000521646 MPNDQ8N594 471 aa14.53□□□□□ -0.08
CSMD1-210ENST00000521646 FBXW7Q969H0 707 aa14.53□□□□□ -0.08
CSMD1-210ENST00000521646 FAM89AQ96GI7 184 aa14.53□□□□□ -0.08
CSMD1-210ENST00000521646 ISCA1Q9BUE6 129 aa14.53□□□□□ -0.08
CSMD1-210ENST00000521646 POLLQ9UGP5 575 aa14.53□□□□□ -0.08
CSMD1-210ENST00000521646 TRMT112Q9UI30 125 aaKnown RBP14.53□□□□□ -0.08
CSMD1-210ENST00000521646 POLR2AP24928 1970 aaKnown RBP14.53□□□□□ -0.08
CSMD1-210ENST00000521646 ASTN2O75129 1339 aaPredicted RBP14.52□□□□□ -0.08
CSMD1-210ENST00000521646 SH3TC1Q8TE82 1336 aa14.52□□□□□ -0.08
CSMD1-210ENST00000521646 BBOX1O75936 387 aa14.52□□□□□ -0.09
CSMD1-210ENST00000521646 GRIPAP1Q4V328 841 aa14.52□□□□□ -0.09
CSMD1-210ENST00000521646 RTL5Q5HYW3 569 aaPredicted RBP14.52□□□□□ -0.09
CSMD1-210ENST00000521646 CIAPIN1Q6FI81 312 aa14.52□□□□□ -0.09
CSMD1-210ENST00000521646 SAMD7Q7Z3H4 446 aa14.52□□□□□ -0.09
CSMD1-210ENST00000521646 CASP8AP2Q9UKL3 1982 aa14.52□□□□□ -0.09
CSMD1-210ENST00000521646 WTIPA6NIX2 430 aaPredicted RBP14.51□□□□□ -0.09
CSMD1-210ENST00000521646 PSMD14O00487 310 aa14.51□□□□□ -0.09
CSMD1-210ENST00000521646 NEFMP07197 916 aa14.51□□□□□ -0.09
CSMD1-210ENST00000521646 GPSM2P81274 684 aa14.51□□□□□ -0.09
CSMD1-210ENST00000521646 MAP2K1Q02750 393 aaPredicted RBP14.51□□□□□ -0.09
CSMD1-210ENST00000521646 EPAS1Q99814 870 aa14.51□□□□□ -0.09
CSMD1-210ENST00000521646 DBNDD1Q9H9R9 158 aa14.51□□□□□ -0.09
CSMD1-210ENST00000521646 BABAM1Q9NWV8 329 aa14.51□□□□□ -0.09
CSMD1-210ENST00000521646 FAM161AQ3B820 660 aa14.5□□□□□ -0.09
CSMD1-210ENST00000521646 VPS33BQ9H267 617 aa14.5□□□□□ -0.09
CSMD1-210ENST00000521646 CNOT7Q9UIV1 285 aaKnown RBP14.5□□□□□ -0.09
CSMD1-210ENST00000521646 ADAMTS8Q9UP79 889 aa14.5□□□□□ -0.09
CSMD1-210ENST00000521646 DDX46Q7L014 1031 aaKnown RBP14.49□□□□□ -0.09
CSMD1-210ENST00000521646 PLBD2Q8NHP8 589 aa14.49□□□□□ -0.09
CSMD1-210ENST00000521646 JARID2Q92833 1246 aaPredicted RBP14.49□□□□□ -0.09
CSMD1-210ENST00000521646 ZNF408Q9H9D4 720 aa14.49□□□□□ -0.09
CSMD1-210ENST00000521646 SEC31BQ9NQW1 1179 aa14.49□□□□□ -0.09
CSMD1-210ENST00000521646 VPS9D1Q9Y2B5 631 aa14.49□□□□□ -0.09
CSMD1-210ENST00000521646 LAS1LQ9Y4W2 734 aaKnown RBP14.49□□□□□ -0.09
CSMD1-210ENST00000521646 ZNF646O15015 1829 aaPredicted RBP14.49□□□□□ -0.09
CSMD1-210ENST00000521646 FAM155AB1AL88 458 aaPredicted RBP14.48□□□□□ -0.09
CSMD1-210ENST00000521646 ADM5C9JUS6 153 aa14.48□□□□□ -0.09
CSMD1-210ENST00000521646 SF3B3Q15393 1217 aaKnown RBP14.48□□□□□ -0.09
CSMD1-210ENST00000521646 HDGFL1Q5TGJ6 251 aa14.48□□□□□ -0.09
CSMD1-210ENST00000521646 USP48Q86UV5 1035 aa14.48□□□□□ -0.09
CSMD1-210ENST00000521646 PHAXQ9H814 394 aaKnown RBP14.48□□□□□ -0.09
CSMD1-210ENST00000521646 MBIPQ9NS73 344 aa14.48□□□□□ -0.09
CSMD1-210ENST00000521646 ZNF853P0CG23 659 aa14.47□□□□□ -0.09
CSMD1-210ENST00000521646 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
CSMD1-210ENST00000521646 RALBP1Q15311 655 aa14.47□□□□□ -0.09
CSMD1-210ENST00000521646 TBC1D10BQ4KMP7 808 aaPredicted RBP14.47□□□□□ -0.09
CSMD1-210ENST00000521646 HSP90AB3PQ58FF7 597 aa14.47□□□□□ -0.09
CSMD1-210ENST00000521646 SUPT20HQ8NEM7 779 aa14.47□□□□□ -0.09
CSMD1-210ENST00000521646 ARIH1Q9Y4X5 557 aaPredicted RBP14.47□□□□□ -0.09
CSMD1-210ENST00000521646 MYBBP1AQ9BQG0 1328 aaKnown RBP14.46□□□□□ -0.09
CSMD1-210ENST00000521646 CDHR2Q9BYE9 1310 aa14.46□□□□□ -0.09
CSMD1-210ENST00000521646 HRO43593 1189 aa14.46□□□□□ -0.09
CSMD1-210ENST00000521646 ECE1P42892 770 aa14.46□□□□□ -0.09
CSMD1-210ENST00000521646 DUSP27Q5VZP5 1158 aa14.46□□□□□ -0.09
CSMD1-210ENST00000521646 TBC1D16Q8TBP0 767 aa14.46□□□□□ -0.09
CSMD1-210ENST00000521646 BCL2L13Q9BXK5 485 aa14.46□□□□□ -0.09
CSMD1-210ENST00000521646 NSFL1CQ9UNZ2 370 aaKnown RBP14.46□□□□□ -0.09
CSMD1-210ENST00000521646 GRXCR2A6NFK2 248 aa14.45□□□□□ -0.1
CSMD1-210ENST00000521646 ECE2O60344 883 aa14.45□□□□□ -0.1
CSMD1-210ENST00000521646 MAP2K2P36507 400 aa14.45□□□□□ -0.1
CSMD1-210ENST00000521646 WASHC4Q2M389 1173 aa14.45□□□□□ -0.1
CSMD1-210ENST00000521646 ZC3H15Q8WU90 426 aaKnown RBP14.45□□□□□ -0.1
CSMD1-210ENST00000521646 RUNDC1Q96C34 613 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms