RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ZNF652Q9Y2D9 606 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 HMGB1P09429 215 aaKnown RBP13.39□□□□□ -0.27
CLK4-206ENST00000520878 TDO2P48775 406 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 MIGA1Q8NAN2 632 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 MAST3O60307 1309 aa13.39□□□□□ -0.27
CLK4-206ENST00000520878 E7EWF7 191 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 CHAF1AQ13111 956 aaPredicted RBP13.38□□□□□ -0.27
CLK4-206ENST00000520878 CCDC152Q4G0S7 254 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 SUSD4Q5VX71 490 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 LRSAM1Q6UWE0 723 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 FAM43AQ8N2R8 423 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 GOLGA8BA8MQT2 603 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 MINDY4BA8MYZ0 360 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 ESPNB1AK53 854 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 IL6STP40189 918 aaPredicted RBP13.38□□□□□ -0.27
CLK4-206ENST00000520878 CCDC173Q0VFZ6 552 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 NAPBQ9H115 298 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 JAG2Q9Y219 1238 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 KLF18A0A0U1RQI7 1052 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 UBE2HP62256 183 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 MAP3K12Q12852 859 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 ZMYM1Q5SVZ6 1142 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 MAGEB6Q8N7X4 407 aa13.38□□□□□ -0.27
CLK4-206ENST00000520878 PUS7LQ9H0K6 701 aaKnown RBP13.38□□□□□ -0.27
CLK4-206ENST00000520878 GPHNQ9NQX3 736 aaPredicted RBP13.38□□□□□ -0.27
CLK4-206ENST00000520878 ZPR1O75312 459 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 PRC1O43663 620 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 CIAO1O76071 339 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 FGAP02671 866 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 ZFYP08048 801 aaPredicted RBP13.37□□□□□ -0.27
CLK4-206ENST00000520878 CCDC102BQ68D86 513 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 OTUD7BQ6GQQ9 843 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 PDE8BO95263 885 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 POLR3DP05423 398 aaPredicted RBP13.37□□□□□ -0.27
CLK4-206ENST00000520878 ME1P48163 572 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 CPLX2Q6PUV4 134 aaKnown RBP13.37□□□□□ -0.27
CLK4-206ENST00000520878 SYNE3Q6ZMZ3 975 aa13.37□□□□□ -0.27
CLK4-206ENST00000520878 MARCH10Q8NA82 808 aaPredicted RBP13.37□□□□□ -0.27
CLK4-206ENST00000520878 CACNA1FO60840 1977 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 ATP2B1P20020 1258 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 TOB2Q14106 344 aaPredicted RBP13.36□□□□□ -0.27
CLK4-206ENST00000520878 SLC4A8Q2Y0W8 1093 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 CCDC183Q5T5S1 534 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 MICU3Q86XE3 530 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 APPBP2Q92624 585 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 GPR108Q9NPR9 543 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 RRAGDQ9NQL2 400 aaPredicted RBP13.36□□□□□ -0.27
CLK4-206ENST00000520878 BCAMP50895 628 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 PTPDC1A2A3K4 754 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 NCOA7Q8NI08 942 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 CDCA7Q9BWT1 371 aaPredicted RBP13.36□□□□□ -0.27
CLK4-206ENST00000520878 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 ZNF609O15014 1411 aa13.36□□□□□ -0.27
CLK4-206ENST00000520878 MARF1Q9Y4F3 1742 aaKnown RBP13.35□□□□□ -0.27
CLK4-206ENST00000520878 MCM5P33992 734 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 MCAMP43121 646 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 TTF1Q15361 905 aaPredicted RBP13.35□□□□□ -0.27
CLK4-206ENST00000520878 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 TNMDQ9H2S6 317 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 PUM3Q15397 648 aaKnown RBP13.35□□□□□ -0.27
CLK4-206ENST00000520878 NBPF5PQ86XG9 351 aaPredicted RBP13.35□□□□□ -0.27
CLK4-206ENST00000520878 USP25Q9UHP3 1055 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 GNPATO15228 680 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
CLK4-206ENST00000520878 CLEC17AQ6ZS10 378 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 STOX1Q6ZVD7 989 aa13.35□□□□□ -0.27
CLK4-206ENST00000520878 SMARCC1Q92922 1105 aaPredicted RBP13.35□□□□□ -0.27
CLK4-206ENST00000520878 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 ZNF445P59923 1031 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 DSCC1Q9BVC3 393 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 NUP62CLQ9H1M0 184 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 ARMT1Q9H993 441 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
CLK4-206ENST00000520878 DHX16O60231 1041 aaKnown RBP13.34□□□□□ -0.27
CLK4-206ENST00000520878 MBD4O95243 580 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 SCRN1Q12765 414 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 ANKRD18AQ8IVF6 992 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 LPIN2Q92539 896 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 GTF3C6Q969F1 213 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
CLK4-206ENST00000520878 SCAND2PQ9GZW5 306 aaPredicted RBP13.34□□□□□ -0.27
CLK4-206ENST00000520878 ORC3Q9UBD5 711 aaPredicted RBP13.34□□□□□ -0.27
CLK4-206ENST00000520878 ERICH2A1L162 156 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 B4E1Z4 1266 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 SASS6Q6UVJ0 657 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 CCDC73Q6ZRK6 1079 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 ZKSCAN3Q9BRR0 538 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 NACAP1Q9BZK3 213 aa13.34□□□□□ -0.27
CLK4-206ENST00000520878 ITPK1Q13572 414 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 SPC24Q8NBT2 197 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 C8orf76Q96K31 380 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 DACT1Q9NYF0 836 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 WWC3Q9ULE0 1092 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 STK38Q15208 465 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 SETDB2Q96T68 719 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 SDF4Q9BRK5 362 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 RIPOR2Q9Y4F9 1068 aa13.33□□□□□ -0.28
CLK4-206ENST00000520878 LMO7Q8WWI1 1683 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms