RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 GPRC5DQ9NZD1 345 aa13.92□□□□□ -0.18
SCARNA20-201ENST00000516768 KLRK1P26718 216 aa13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 LMOD1P29536 600 aaPredicted RBP13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 ATG9AQ7Z3C6 839 aa13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 VGLL2Q8N8G2 317 aa13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 SMC1BQ8NDV3 1235 aa13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 COPRSQ9NQ92 184 aa13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 CNOT7Q9UIV1 285 aaKnown RBP13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
SCARNA20-201ENST00000516768 USP17L3A6NCW0 530 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 USP17L4A6NCW7 530 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 SRGAP3O43295 1099 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 CIAO1O76071 339 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 POTEIP0CG38 1075 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 POTEJP0CG39 1038 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 RPS12P25398 132 aaKnown RBP13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 ATP8B2P98198 1209 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 METTL24Q5JXM2 366 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 USP50Q70EL3 339 aaPredicted RBP13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 USP17L1Q7RTZ2 530 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 CD209Q9NNX6 404 aa13.9□□□□□ -0.18
SCARNA20-201ENST00000516768 H7C1D1 291 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 IL1R1P14778 569 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 PDE3AQ14432 1141 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 STRIP1Q5VSL9 837 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 TTLL5Q6EMB2 1281 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 CHADLQ6NUI6 762 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 LDHDQ86WU2 507 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 AGBL3Q8NEM8 1001 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 FAM84BQ96KN1 310 aaPredicted RBP13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 GMLQ99445 158 aa13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 ADARB2Q9NS39 739 aaKnown RBP13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 PA2G4Q9UQ80 394 aaKnown RBP13.89□□□□□ -0.19
SCARNA20-201ENST00000516768 SCN4AP35499 1836 aa13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 PNMA6EA0A0J9YXQ4 647 aa13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 FGFR2P21802 821 aa13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 IL15P40933 162 aaPredicted RBP13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 MVPQ14764 893 aaKnown RBP13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 RSBN1LQ6PCB5 846 aaPredicted RBP13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 ZNF804AQ7Z570 1209 aa13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 SIL1Q9H173 461 aa13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 CEP126Q9P2H0 1117 aa13.88□□□□□ -0.19
SCARNA20-201ENST00000516768 SASH1O94885 1247 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 HIBADHP31937 336 aaKnown RBP13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 DACT2Q5SW24 774 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 FBXO33Q7Z6M2 555 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 MICALL2Q8IY33 904 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 TDRD7Q8NHU6 1098 aaKnown RBP13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 SSH3Q8TE77 659 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 PGAP2Q9UHJ9 254 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 DDX19BQ9UMR2 479 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 COG6Q9Y2V7 657 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 SPEF2Q9C093 1822 aa13.87□□□□□ -0.19
SCARNA20-201ENST00000516768 SHTN1A0MZ66 631 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 HSPA6P17066 643 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 GYG1P46976 350 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 HIRAP54198 1017 aaPredicted RBP13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 GTF2IP78347 998 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 POLA2Q14181 598 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 PUM3Q15397 648 aaKnown RBP13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 CAVIN4Q5BKX8 364 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 C20orf194Q5TEA3 1177 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 LPIN2Q92539 896 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 ZBTB40Q9NUA8 1239 aa13.86□□□□□ -0.19
SCARNA20-201ENST00000516768 ITGBL1O95965 494 aaPredicted RBP13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 IFIT1P09914 478 aaKnown RBP13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 USP17L8P0C7I0 530 aa13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 MMP14P50281 582 aa13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 ZNF280AP59817 542 aaPredicted RBP13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 CNTROBQ8N137 903 aa13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 ZC3H15Q8WU90 426 aaKnown RBP13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 CHMP4BQ9H444 224 aaKnown RBP13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 C1orf115Q9H7X2 142 aa13.85□□□□□ -0.19
SCARNA20-201ENST00000516768 SCN9AQ15858 1988 aa13.84□□□□□ -0.19
SCARNA20-201ENST00000516768 BCAMP50895 628 aa13.84□□□□□ -0.19
SCARNA20-201ENST00000516768 G3BP1Q13283 466 aaKnown RBP eCLIP13.84□□□□□ -0.19
SCARNA20-201ENST00000516768 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
SCARNA20-201ENST00000516768 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
SCARNA20-201ENST00000516768 ZNF609O15014 1411 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 EGFRP00533 1210 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 SLC5A1P13866 664 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 TIMM10P62072 90 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 FKBP1AP62942 108 aaKnown RBP13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 TFCP2Q12800 502 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 RBM26Q5T8P6 1007 aaKnown RBP13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 MAP1SQ66K74 1059 aaPredicted RBP13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 CEP85Q6P2H3 762 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 VPS37DQ86XT2 251 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 RPAP2Q8IXW5 612 aaPredicted RBP13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 OGFOD1Q8N543 542 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 FBXW7Q969H0 707 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 NOP58Q9Y2X3 529 aaKnown RBP13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 FAM205AQ6ZU69 1335 aa13.83□□□□□ -0.2
SCARNA20-201ENST00000516768 APLP1P51693 650 aa13.82□□□□□ -0.2
SCARNA20-201ENST00000516768 ATP2B3Q16720 1220 aa13.82□□□□□ -0.2
SCARNA20-201ENST00000516768 TBC1D10BQ4KMP7 808 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms