RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 TBC1D16Q8TBP0 767 aa14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 ZBTB47Q9UFB7 747 aaPredicted RBP14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 NSFL1CQ9UNZ2 370 aaKnown RBP14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 BCS1LQ9Y276 419 aa14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 PSME4Q14997 1843 aa14.73□□□□□ -0.05
PDLIM5-220ENST00000514830 CCDC88AQ3V6T2 1871 aa14.72□□□□□ -0.05
PDLIM5-220ENST00000514830 IFIT1P09914 478 aaKnown RBP14.72□□□□□ -0.05
PDLIM5-220ENST00000514830 SLC5A1P13866 664 aa14.72□□□□□ -0.05
PDLIM5-220ENST00000514830 OLFM4Q6UX06 510 aa14.72□□□□□ -0.05
PDLIM5-220ENST00000514830 IL1RAPL2Q9NP60 686 aa14.72□□□□□ -0.05
PDLIM5-220ENST00000514830 POLLQ9UGP5 575 aa14.72□□□□□ -0.05
PDLIM5-220ENST00000514830 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
PDLIM5-220ENST00000514830 APBB1O00213 710 aa14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 SMARCA5O60264 1052 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 UFL1O94874 794 aa14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 HSPA6P17066 643 aa14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 FKBP4Q02790 459 aaKnown RBP eCLIP14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 SLC51AQ86UW1 340 aa14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 EYA3Q99504 573 aa14.71□□□□□ -0.05
PDLIM5-220ENST00000514830 AOX1Q06278 1338 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 TTC41PQ6P2S7 1318 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 IFIT2P09913 472 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 KCNJ4P48050 445 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 TIMM10P62072 90 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 AACSQ86V21 672 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 OSBPL3Q9H4L5 887 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 STAP2Q9UGK3 403 aa14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 DBNLQ9UJU6 430 aaKnown RBP14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 ZNF646O15015 1829 aaPredicted RBP14.7□□□□□ -0.06
PDLIM5-220ENST00000514830 NFKBIEO00221 500 aa14.69□□□□□ -0.06
PDLIM5-220ENST00000514830 KIAA2012Q0VF49 1180 aa14.69□□□□□ -0.06
PDLIM5-220ENST00000514830 FBXO33Q7Z6M2 555 aa14.69□□□□□ -0.06
PDLIM5-220ENST00000514830 ZNF526Q8TF50 670 aaPredicted RBP14.69□□□□□ -0.06
PDLIM5-220ENST00000514830 XAGE2Q96GT9 111 aa14.69□□□□□ -0.06
PDLIM5-220ENST00000514830 PDS5AQ29RF7 1337 aaKnown RBP14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 WTIPA6NIX2 430 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 C6orf229H3BNL8 230 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 SNAP23O00161 211 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 WASHC4Q2M389 1173 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 CAVIN4Q5BKX8 364 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 GPATCH3Q96I76 525 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 FAM84BQ96KN1 310 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 NEUROD6Q96NK8 337 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 DBNDD2Q9BQY9 259 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 TAOK3Q9H2K8 898 aa14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 ZNF219Q9P2Y4 722 aaPredicted RBP14.68□□□□□ -0.06
PDLIM5-220ENST00000514830 SEMA3EO15041 775 aa14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 MX1P20591 662 aa14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 PDE4AP27815 886 aa14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 ARID4AP29374 1257 aaPredicted RBP14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 CCDC158Q5M9N0 1113 aa14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 ZNF804AQ7Z570 1209 aa14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 ZC3H12CQ9C0D7 883 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 COA1Q9GZY4 146 aa14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 CCDC8Q9H0W5 538 aaPredicted RBP14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 ECHDC1Q9NTX5 307 aa14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 TLR7Q9NYK1 1049 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 GOLGB1Q14789 3259 aaKnown RBP14.67□□□□□ -0.06
PDLIM5-220ENST00000514830 DOCK2Q92608 1830 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 UQCRFS1P1P0C7P4 283 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 IL1R1P14778 569 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 ATP5JP18859 108 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 KLRK1P26718 216 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 ADORA1P30542 326 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 HIBADHP31937 336 aaKnown RBP14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 PDE1AP54750 535 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 CCDC102BQ68D86 513 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 TXNRD3Q86VQ6 643 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 PLEKHM2Q8IWE5 1019 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 C16orf71Q8IYS4 520 aaPredicted RBP14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 AK9Q5TCS8 1911 aa14.66□□□□□ -0.06
PDLIM5-220ENST00000514830 SCN9AQ15858 1988 aa14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 ERC2O15083 957 aa14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 IARSP41252 1262 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 PODNQ7Z5L7 613 aa14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 TDRD7Q8NHU6 1098 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 OTUD7AQ8TE49 926 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 GNL3LQ9NVN8 582 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 COL4A5P29400 1685 aa14.65□□□□□ -0.06
PDLIM5-220ENST00000514830 TIAM2Q8IVF5 1701 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 IGSF3O75054 1194 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 GLRX3O76003 335 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 PHKA1P46020 1223 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 GYG1P46976 350 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 BCAMP50895 628 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 APLP1P51693 650 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 GORABQ5T7V8 394 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 PI4K2BQ8TCG2 481 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 CD209Q9NNX6 404 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 CEP350Q5VT06 3117 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 MYH7P12883 1935 aa14.64□□□□□ -0.07
PDLIM5-220ENST00000514830 PPIP5K2O43314 1243 aa14.63□□□□□ -0.07
PDLIM5-220ENST00000514830 TTC39AQ5SRH9 613 aa14.63□□□□□ -0.07
PDLIM5-220ENST00000514830 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
PDLIM5-220ENST00000514830 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
PDLIM5-220ENST00000514830 VPS37DQ86XT2 251 aa14.63□□□□□ -0.07
PDLIM5-220ENST00000514830 GPR101Q96P66 508 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms