RNA–Protein interactions for RNA: ENST00000512925.1

PFDN1-205, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 900 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-205ENST00000512925 USP17L4A6NCW7 530 aa13.56□□□□□ -0.24
PFDN1-205ENST00000512925 WTIPA6NIX2 430 aaPredicted RBP13.56□□□□□ -0.24
PFDN1-205ENST00000512925 G3V3G9 751 aa13.56□□□□□ -0.24
PFDN1-205ENST00000512925 MKRN3Q13064 507 aaKnown RBP13.56□□□□□ -0.24
PFDN1-205ENST00000512925 DCAF8Q5TAQ9 597 aa13.56□□□□□ -0.24
PFDN1-205ENST00000512925 USP17L1Q7RTZ2 530 aa13.56□□□□□ -0.24
PFDN1-205ENST00000512925 FKTNO75072 461 aa13.55□□□□□ -0.24
PFDN1-205ENST00000512925 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
PFDN1-205ENST00000512925 PODNQ7Z5L7 613 aa13.55□□□□□ -0.24
PFDN1-205ENST00000512925 ZBTB38Q8NAP3 1195 aaPredicted RBP13.55□□□□□ -0.24
PFDN1-205ENST00000512925 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
PFDN1-205ENST00000512925 CENPFP49454 3210 aa13.55□□□□□ -0.24
PFDN1-205ENST00000512925 BRCA2P51587 3418 aa13.55□□□□□ -0.24
PFDN1-205ENST00000512925 HAX1O00165 279 aa13.54□□□□□ -0.24
PFDN1-205ENST00000512925 WNT10BO00744 389 aa13.54□□□□□ -0.24
PFDN1-205ENST00000512925 PTPN12Q05209 780 aaKnown RBP13.54□□□□□ -0.24
PFDN1-205ENST00000512925 MXD3Q9BW11 206 aa13.54□□□□□ -0.24
PFDN1-205ENST00000512925 POTEFA5A3E0 1075 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 HOXB7P09629 217 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 LMOD3Q0VAK6 560 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 SREBF2Q12772 1141 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 TTLL12Q14166 644 aaPredicted RBP13.53□□□□□ -0.24
PFDN1-205ENST00000512925 DACT2Q5SW24 774 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 LDLRAD1Q5T700 205 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 TRIM35Q9UPQ4 493 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 XDHP47989 1333 aa13.53□□□□□ -0.24
PFDN1-205ENST00000512925 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
PFDN1-205ENST00000512925 SPRYD7Q5W111 196 aa13.52□□□□□ -0.25
PFDN1-205ENST00000512925 JARID2Q92833 1246 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-205ENST00000512925 CCDC85AQ96PX6 553 aaPredicted RBP13.52□□□□□ -0.25
PFDN1-205ENST00000512925 PSME4Q14997 1843 aa13.52□□□□□ -0.25
PFDN1-205ENST00000512925 PDE8AO60658 829 aa13.51□□□□□ -0.25
PFDN1-205ENST00000512925 PCCAP05165 728 aaPredicted RBP13.51□□□□□ -0.25
PFDN1-205ENST00000512925 NEUROD2Q15784 382 aa13.51□□□□□ -0.25
PFDN1-205ENST00000512925 CCDC152Q4G0S7 254 aa13.51□□□□□ -0.25
PFDN1-205ENST00000512925 OTOP1Q7RTM1 612 aa13.51□□□□□ -0.25
PFDN1-205ENST00000512925 LAS1LQ9Y4W2 734 aaKnown RBP13.51□□□□□ -0.25
PFDN1-205ENST00000512925 NF2P35240 595 aa13.5□□□□□ -0.25
PFDN1-205ENST00000512925 FXR1P51114 621 aaKnown RBP eCLIP13.5□□□□□ -0.25
PFDN1-205ENST00000512925 PRKG1Q13976 671 aa13.5□□□□□ -0.25
PFDN1-205ENST00000512925 INTS3Q68E01 1043 aaKnown RBP13.5□□□□□ -0.25
PFDN1-205ENST00000512925 RIC3Q7Z5B4 369 aa13.5□□□□□ -0.25
PFDN1-205ENST00000512925 ANKRD18AQ8IVF6 992 aa13.5□□□□□ -0.25
PFDN1-205ENST00000512925 ZBED3Q96IU2 234 aaPredicted RBP13.5□□□□□ -0.25
PFDN1-205ENST00000512925 PHAXQ9H814 394 aaKnown RBP13.5□□□□□ -0.25
PFDN1-205ENST00000512925 FZD1Q9UP38 647 aa13.5□□□□□ -0.25
PFDN1-205ENST00000512925 TRIM17Q9Y577 477 aa13.5□□□□□ -0.25
PFDN1-205ENST00000512925 MED23Q9ULK4 1368 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 SASH1O94885 1247 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 ALDH1A1P00352 501 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 HSP90B1P14625 803 aaKnown RBP13.49□□□□□ -0.25
PFDN1-205ENST00000512925 STRIP1Q5VSL9 837 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 DUSP27Q5VZP5 1158 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 TXNRD3Q86VQ6 643 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 IFNL1Q8IU54 200 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 OGFOD1Q8N543 542 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 CCDC191Q8NCU4 936 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 MYD88Q99836 296 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 MINPP1Q9UNW1 487 aa13.49□□□□□ -0.25
PFDN1-205ENST00000512925 IGF2BP3O00425 579 aaKnown RBP eCLIP13.48□□□□□ -0.25
PFDN1-205ENST00000512925 INHBEP58166 350 aa13.48□□□□□ -0.25
PFDN1-205ENST00000512925 MAP3K11Q16584 847 aa13.48□□□□□ -0.25
PFDN1-205ENST00000512925 CCDC146Q8IYE0 955 aa13.48□□□□□ -0.25
PFDN1-205ENST00000512925 ANGEL1Q9UNK9 670 aaKnown RBP13.48□□□□□ -0.25
PFDN1-205ENST00000512925 PTPN22Q9Y2R2 807 aa13.48□□□□□ -0.25
PFDN1-205ENST00000512925 MYO3BQ8WXR4 1341 aa13.47□□□□□ -0.25
PFDN1-205ENST00000512925 MANSC4A6NHS7 340 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-205ENST00000512925 EN2P19622 333 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-205ENST00000512925 CCT4P50991 539 aaKnown RBP13.47□□□□□ -0.25
PFDN1-205ENST00000512925 CAP1Q01518 475 aa13.47□□□□□ -0.25
PFDN1-205ENST00000512925 GOLGA2Q08379 1002 aa13.47□□□□□ -0.25
PFDN1-205ENST00000512925 COA1Q9GZY4 146 aa13.47□□□□□ -0.25
PFDN1-205ENST00000512925 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-205ENST00000512925 ZNF646O15015 1829 aaPredicted RBP13.47□□□□□ -0.25
PFDN1-205ENST00000512925 SZT2Q5T011 3432 aa13.46□□□□□ -0.25
PFDN1-205ENST00000512925 MMP14P50281 582 aa13.46□□□□□ -0.25
PFDN1-205ENST00000512925 APOBEC3FQ8IUX4 373 aaKnown RBP13.46□□□□□ -0.25
PFDN1-205ENST00000512925 TTLL11Q8NHH1 800 aa13.46□□□□□ -0.25
PFDN1-205ENST00000512925 ARMC5Q96C12 935 aa13.46□□□□□ -0.25
PFDN1-205ENST00000512925 CLMNQ96JQ2 1002 aa13.46□□□□□ -0.25
PFDN1-205ENST00000512925 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
PFDN1-205ENST00000512925 CWC25Q9NXE8 425 aaPredicted RBP13.46□□□□□ -0.25
PFDN1-205ENST00000512925 ZNF853P0CG23 659 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-205ENST00000512925 TTLL5Q6EMB2 1281 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 KIAA0825Q8IV33 1275 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 FBXW7Q969H0 707 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 SLC10A4Q96EP9 437 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 WNK4Q96J92 1243 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 CDC5LQ99459 802 aaKnown RBP13.45□□□□□ -0.26
PFDN1-205ENST00000512925 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
PFDN1-205ENST00000512925 DEFB129Q9H1M3 183 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 SSC5DA1L4H1 1573 aa13.45□□□□□ -0.26
PFDN1-205ENST00000512925 KIAA0100Q14667 2235 aaKnown RBP13.44□□□□□ -0.26
PFDN1-205ENST00000512925 KLRK1P26718 216 aa13.44□□□□□ -0.26
PFDN1-205ENST00000512925 CTSWP56202 376 aa13.44□□□□□ -0.26
PFDN1-205ENST00000512925 CD99L2Q8TCZ2 262 aa13.44□□□□□ -0.26
PFDN1-205ENST00000512925 ERO1AQ96HE7 468 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms