RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 IQCEQ6IPM2 695 aa9.25□□□□□ -0.93
NEK1-208ENST00000512193 KANK3Q6NY19 840 aa9.25□□□□□ -0.93
NEK1-208ENST00000512193 METTL22Q9BUU2 404 aaPredicted RBP9.25□□□□□ -0.93
NEK1-208ENST00000512193 ZNF76P36508 570 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 TDRD12Q587J7 1177 aaKnown RBP9.24□□□□□ -0.93
NEK1-208ENST00000512193 MIGA1Q8NAN2 632 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 TSC1Q92574 1164 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 ZNF287Q9HBT7 754 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 SLU7O95391 586 aaKnown RBP9.24□□□□□ -0.93
NEK1-208ENST00000512193 DHX58Q96C10 678 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 EAF2Q96CJ1 260 aaPredicted RBP9.24□□□□□ -0.93
NEK1-208ENST00000512193 ZNF496Q96IT1 587 aaPredicted RBP9.24□□□□□ -0.93
NEK1-208ENST00000512193 CBX8Q9HC52 389 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 MYO6Q9UM54 1294 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 TRPM2O94759 1503 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 FSD2A1L4K1 749 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 EYA2O00167 538 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 RRAGBQ5VZM2 374 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 TXLNBQ8N3L3 684 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 ESR2Q92731 530 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 TAF4BQ92750 862 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 KRT23Q9C075 422 aa9.24□□□□□ -0.93
NEK1-208ENST00000512193 KDM5AP29375 1690 aaKnown RBP9.24□□□□□ -0.93
NEK1-208ENST00000512193 GOLGA6L9A6NEM1 432 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 A1BGP04217 495 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 FAM160A1Q05DH4 1040 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 GCKRQ14397 625 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 SYT10Q6XYQ8 523 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 RASEFQ8IZ41 740 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 KRT222Q8N1A0 295 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 ZKSCAN3Q9BRR0 538 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 UBA5Q9GZZ9 404 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 TCP11L1Q9NUJ3 509 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 BCORL1Q5H9F3 1711 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 TRIM75PA6NK02 468 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 KIAA0754O94854 1291 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 LTKP29376 864 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 KIF5BP33176 963 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 PDE4BQ07343 736 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 IFIT1BQ5T764 474 aaKnown RBP9.23□□□□□ -0.93
NEK1-208ENST00000512193 TMTC2Q8N394 836 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 KAT14Q9H8E8 782 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 SAMD9LQ8IVG5 1584 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 IRS4O14654 1257 aaPredicted RBP9.23□□□□□ -0.93
NEK1-208ENST00000512193 LIG1P18858 919 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 CCDC96Q2M329 555 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 KBTBD3Q8NAB2 608 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 TRIM47Q96LD4 638 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 KIF24Q5T7B8 1368 aa9.23□□□□□ -0.93
NEK1-208ENST00000512193 B4E1Z4 1266 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 ERLIN2O94905 339 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 CCDC152Q4G0S7 254 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 MAGEB6Q8N7X4 407 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 ACSBG1Q96GR2 724 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 PPP1R9BQ96SB3 815 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 CLSTN2Q9H4D0 955 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 CNNM2Q9H8M5 875 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 A0A0D9SFI3 127 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 RIOK3O14730 519 aaKnown RBP9.22□□□□□ -0.93
NEK1-208ENST00000512193 BRAPQ7Z569 592 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 C19orf44Q9H6X5 657 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 USO1O60763 962 aaKnown RBP9.22□□□□□ -0.93
NEK1-208ENST00000512193 PAFAH1B1P43034 410 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 MATR3P43243 847 aaKnown RBP eCLIP9.22□□□□□ -0.931e-6■■■■■ 28.3
NEK1-208ENST00000512193 MCM6Q14566 821 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 KARSQ15046 597 aaKnown RBP9.22□□□□□ -0.93
NEK1-208ENST00000512193 SEC62Q99442 399 aaKnown RBP9.22□□□□□ -0.93
NEK1-208ENST00000512193 TM6SF1Q9BZW5 370 aa9.22□□□□□ -0.93
NEK1-208ENST00000512193 TAX1BP1Q86VP1 789 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 CRACR2BQ8N4Y2 399 aaPredicted RBP9.21□□□□□ -0.93
NEK1-208ENST00000512193 PLBD2Q8NHP8 589 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 UTP14AQ9BVJ6 771 aaKnown RBP9.21□□□□□ -0.93
NEK1-208ENST00000512193 RAB34Q9BZG1 259 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 HELLSQ9NRZ9 838 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 MTMR6Q9Y217 621 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 C6orf229H3BNL8 230 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 GIGYF1O75420 1035 aaPredicted RBP9.21□□□□□ -0.93
NEK1-208ENST00000512193 ZNF853P0CG23 659 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 TRIM21P19474 475 aaKnown RBP9.21□□□□□ -0.93
NEK1-208ENST00000512193 LMAN1P49257 510 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 MAP9Q49MG5 647 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 NAA16Q6N069 864 aaPredicted RBP9.21□□□□□ -0.93
NEK1-208ENST00000512193 DHX37Q8IY37 1157 aaKnown RBP9.21□□□□□ -0.93
NEK1-208ENST00000512193 SIRT1Q96EB6 747 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 ARFGAP3Q9NP61 516 aa9.21□□□□□ -0.93
NEK1-208ENST00000512193 ABCA8O94911 1581 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 IL2RBP14784 551 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 ZNF75DP51815 510 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 TMEM266Q2M3C6 531 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 ADCK5Q3MIX3 580 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 DZIP3Q86Y13 1208 aaKnown RBP9.21□□□□□ -0.94
NEK1-208ENST00000512193 CCDC94Q9BW85 323 aaPredicted RBP9.21□□□□□ -0.94
NEK1-208ENST00000512193 JADE2Q9NQC1 790 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 TPCN1Q9ULQ1 816 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 NIP7Q9Y221 180 aaKnown RBP eCLIP9.21□□□□□ -0.94
NEK1-208ENST00000512193 IBTKQ9P2D0 1353 aaPredicted RBP9.21□□□□□ -0.94
NEK1-208ENST00000512193 BEND3Q5T5X7 828 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 ANKRD18AQ8IVF6 992 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 TSG101Q99816 390 aa9.21□□□□□ -0.94
NEK1-208ENST00000512193 CRNKL1Q9BZJ0 848 aaKnown RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms