RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 LMBR1LQ6UX01 489 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 NUDT18Q6ZVK8 323 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 NLRP10Q86W26 655 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 PLEKHM2Q8IWE5 1019 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 SIL1Q9H173 461 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 KDM4CQ9H3R0 1056 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 GPBP1L1Q9HC44 474 aaPredicted RBP9.9□□□□□ -0.82
HTT-209ENST00000512068 IL1RAPL2Q9NP60 686 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 KIAA1468Q9P260 1216 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 RABGEF1Q9UJ41 708 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 VPS9D1Q9Y2B5 631 aa9.9□□□□□ -0.82
HTT-209ENST00000512068 AK9Q5TCS8 1911 aa9.9□□□□□ -0.83
HTT-209ENST00000512068 AOX1Q06278 1338 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 CDHR2Q9BYE9 1310 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 TK2O00142 265 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 ERC2O15083 957 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 NPHP1O15259 732 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 CDC45O75419 566 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 RPS6KA4O75676 772 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 TRIM37O94972 964 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 RABL6Q3YEC7 729 aaPredicted RBP9.89□□□□□ -0.83
HTT-209ENST00000512068 SLC27A3Q5K4L6 730 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 UTP14AQ9BVJ6 771 aaKnown RBP9.89□□□□□ -0.83
HTT-209ENST00000512068 PA2G4Q9UQ80 394 aaKnown RBP9.89□□□□□ -0.83
HTT-209ENST00000512068 NIP7Q9Y221 180 aaKnown RBP eCLIP9.89□□□□□ -0.83
HTT-209ENST00000512068 C4BP0C0L5 1744 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 SCN7AQ01118 1682 aa9.89□□□□□ -0.83
HTT-209ENST00000512068 SH3TC1Q8TE82 1336 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.88□□□□□ -0.83
HTT-209ENST00000512068 IRS4O14654 1257 aaPredicted RBP9.88□□□□□ -0.83
HTT-209ENST00000512068 CAMTA2O94983 1202 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 GTF2E1P29083 439 aaPredicted RBP9.88□□□□□ -0.83
HTT-209ENST00000512068 CLCN1P35523 988 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 PDE1AP54750 535 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 CASP7P55210 303 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 IFIT5Q13325 482 aaKnown RBP9.88□□□□□ -0.83
HTT-209ENST00000512068 TTLL12Q14166 644 aaPredicted RBP9.88□□□□□ -0.83
HTT-209ENST00000512068 EPHA10Q5JZY3 1008 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 CLEC4GQ6UXB4 293 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 PTF1AQ7RTS3 328 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 AACSQ86V21 672 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 C16orf71Q8IYS4 520 aaPredicted RBP9.88□□□□□ -0.83
HTT-209ENST00000512068 FAM89AQ96GI7 184 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 KAZALD1Q96I82 304 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 PLA2G12BQ9BX93 195 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 COPRSQ9NQ92 184 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 PNMA3Q9UL41 463 aa9.88□□□□□ -0.83
HTT-209ENST00000512068 ANKRD18BA2A2Z9 1011 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 FAM177BA6PVY3 158 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 PDE8AO60658 829 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 RFC4P35249 363 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 KCNQ4P56696 695 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 LSM11P83369 360 aaKnown RBP eCLIP9.87□□□□□ -0.83
HTT-209ENST00000512068 FOXO4P98177 505 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 MDM2Q00987 491 aaPredicted RBP9.87□□□□□ -0.83
HTT-209ENST00000512068 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 NUTM1Q86Y26 1132 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 ZNF34Q8IZ26 560 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 DDRGK1Q96HY6 314 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 REPIN1Q9BWE0 567 aaKnown RBP9.87□□□□□ -0.83
HTT-209ENST00000512068 NYXQ9GZU5 481 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 OSBPL3Q9H4L5 887 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 GPCPD1Q9NPB8 672 aa9.87□□□□□ -0.83
HTT-209ENST00000512068 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
HTT-209ENST00000512068 TTC41PQ6P2S7 1318 aa9.86□□□□□ -0.83
HTT-209ENST00000512068 RCCD1A6NED2 376 aa9.86□□□□□ -0.83
HTT-209ENST00000512068 IL15P40933 162 aaPredicted RBP9.86□□□□□ -0.83
HTT-209ENST00000512068 MFAP1P55081 439 aaKnown RBP9.86□□□□□ -0.83
HTT-209ENST00000512068 CTSWP56202 376 aa9.86□□□□□ -0.83
HTT-209ENST00000512068 CNTROBQ8N137 903 aa9.86□□□□□ -0.83
HTT-209ENST00000512068 OTUD7AQ8TE49 926 aaPredicted RBP9.86□□□□□ -0.83
HTT-209ENST00000512068 RILPL2Q969X0 211 aa9.86□□□□□ -0.83
HTT-209ENST00000512068 NARFQ9UHQ1 456 aa9.86□□□□□ -0.83
HTT-209ENST00000512068 LAMB2P55268 1798 aa9.86□□□□□ -0.83
HTT-209ENST00000512068 UBN2Q6ZU65 1347 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 BHMG1C9JSJ3 638 aaPredicted RBP9.85□□□□□ -0.83
HTT-209ENST00000512068 GLRX3O76003 335 aaKnown RBP9.85□□□□□ -0.83
HTT-209ENST00000512068 APBA3O96018 575 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 PTPN12Q05209 780 aaKnown RBP9.85□□□□□ -0.83
HTT-209ENST00000512068 TMEM132AQ24JP5 1023 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 CCDC152Q4G0S7 254 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 USPL1Q5W0Q7 1092 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 BICDL1Q6ZP65 573 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 KLHDC4Q8TBB5 520 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 SETDB2Q96T68 719 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 ECHDC1Q9NTX5 307 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 STAP2Q9UGK3 403 aa9.85□□□□□ -0.83
HTT-209ENST00000512068 EYA2O00167 538 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 SMAPO00193 183 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 CIAO1O76071 339 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 GSPT1P15170 499 aaKnown RBP9.84□□□□□ -0.83
HTT-209ENST00000512068 DNAJB2P25686 324 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 RFX5P48382 616 aaPredicted RBP9.84□□□□□ -0.83
HTT-209ENST00000512068 SUSD4Q5VX71 490 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 CCDC85AQ96PX6 553 aaPredicted RBP9.84□□□□□ -0.83
HTT-209ENST00000512068 CNNM1Q9NRU3 951 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 CEP126Q9P2H0 1117 aa9.84□□□□□ -0.83
HTT-209ENST00000512068 AKAP2Q9Y2D5 859 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms