RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 PNMA6EA0A0J9YXQ4 647 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 USP17L3A6NCW0 530 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 USP17L4A6NCW7 530 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 PSMD14O00487 310 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 VIL1P09327 827 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 KLRK1P26718 216 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 EPHX2P34913 555 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 IL15P40933 162 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 GMPSP49915 693 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 SCNN1DP51172 638 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 C1QTNF8P60827 252 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 USP17L1Q7RTZ2 530 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 ATG9AQ7Z3C6 839 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 ZNF804AQ7Z570 1209 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 PNMA8AQ86V59 439 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 VGLL2Q8N8G2 317 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 RBM46Q8TBY0 533 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 TAF1DQ9H5J8 278 aaPredicted RBP8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 C1orf115Q9H7X2 142 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 KCNQ5Q9NR82 932 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 GPRC5DQ9NZD1 345 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 CEP126Q9P2H0 1117 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 PA2G4Q9UQ80 394 aaKnown RBP8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 SPEF2Q9C093 1822 aa8.89□□□□□ -0.99
PDLIM5-215ENST00000511586 IRS2Q9Y4H2 1338 aa8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 RPS12P25398 132 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 EPS15P42566 896 aa8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 PUM3Q15397 648 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 CAVIN4Q5BKX8 364 aa8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 C20orf194Q5TEA3 1177 aa8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 DPF2Q92785 391 aa8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 CD209Q9NNX6 404 aa8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 CNOT7Q9UIV1 285 aaKnown RBP8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 ZBTB12Q9Y330 459 aaPredicted RBP8.88□□□□□ -0.99
PDLIM5-215ENST00000511586 H7C1D1 291 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 IFIT1P09914 478 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 SLC5A1P13866 664 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 IL1R1P14778 569 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 FGFR2P21802 821 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 HIBADHP31937 336 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 RRP1P56182 461 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 FSTL1Q12841 308 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 G3BP1Q13283 466 aaKnown RBP eCLIP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 POLA2Q14181 598 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 EAPPQ56P03 285 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 STRIP1Q5VSL9 837 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 TTLL5Q6EMB2 1281 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 CEP85Q6P2H3 762 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 RSBN1LQ6PCB5 846 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 USP50Q70EL3 339 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 VPS37DQ86XT2 251 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 SMC1BQ8NDV3 1235 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 AGBL3Q8NEM8 1001 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 SSH3Q8TE77 659 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 LPIN2Q92539 896 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 FBXW7Q969H0 707 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 FAM84BQ96KN1 310 aaPredicted RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 ADARB2Q9NS39 739 aaKnown RBP8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 ZBTB40Q9NUA8 1239 aa8.87□□□□□ -0.99
PDLIM5-215ENST00000511586 SASH1O94885 1247 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 GYG1P46976 350 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 GTF2IP78347 998 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 ATP2B3Q16720 1220 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 DACT2Q5SW24 774 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 FBXO33Q7Z6M2 555 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 LDHDQ86WU2 507 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 RPAP2Q8IXW5 612 aaPredicted RBP8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 MICALL2Q8IY33 904 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 TDRD7Q8NHU6 1098 aaKnown RBP8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 CLEC11AQ9Y240 323 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 AKAP2Q9Y2D5 859 aa8.86□□□□□ -0.99
PDLIM5-215ENST00000511586 MYO3BQ8WXR4 1341 aa8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 SCN4AP35499 1836 aa8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 FRAT2O75474 233 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 SURF6O75683 361 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 POTEIP0CG38 1075 aa8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 POTEJP0CG39 1038 aa8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 TFCP2Q12800 502 aa8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 OS9Q13438 667 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 CHADLQ6NUI6 762 aa8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 GMLQ99445 158 aa8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 NOP58Q9Y2X3 529 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-215ENST00000511586 SHTN1A0MZ66 631 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 ZNF609O15014 1411 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 HMMRO75330 724 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 USP17L8P0C7I0 530 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 MMP14P50281 582 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 BCAMP50895 628 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 TIMM10P62072 90 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 FKBP1AP62942 108 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 HSP90AB4PQ58FF6 505 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 OGFOD1Q8N543 542 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 ZC3H15Q8WU90 426 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 MXD3Q9BW11 206 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 GTF3C3Q9Y5Q9 886 aa8.84□□□□□ -0.99
PDLIM5-215ENST00000511586 FAM205AQ6ZU69 1335 aa8.83□□□□□ -1
PDLIM5-215ENST00000511586 A0A1B0GUL7 405 aa8.83□□□□□ -1
PDLIM5-215ENST00000511586 HIRAP54198 1017 aaPredicted RBP8.83□□□□□ -1
PDLIM5-215ENST00000511586 ZNF280AP59817 542 aaPredicted RBP8.83□□□□□ -1
PDLIM5-215ENST00000511586 KIF4BQ2VIQ3 1234 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms