RNA–Protein interactions for RNA: ENST00000509789.2

CYSTM1-204, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 4

Gene CYSTM1, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-204ENST00000509789 GPATCH3Q96I76 525 aa16.99■□□□□ 0.31
CYSTM1-204ENST00000509789 WWC3Q9ULE0 1092 aa16.99■□□□□ 0.31
CYSTM1-204ENST00000509789 BCS1LQ9Y276 419 aa16.99■□□□□ 0.31
CYSTM1-204ENST00000509789 DLEC1Q9Y238 1755 aa16.98■□□□□ 0.31
CYSTM1-204ENST00000509789 C6orf229H3BNL8 230 aa16.98■□□□□ 0.31
CYSTM1-204ENST00000509789 SNAP23O00161 211 aa16.98■□□□□ 0.31
CYSTM1-204ENST00000509789 UFL1O94874 794 aa16.98■□□□□ 0.31
CYSTM1-204ENST00000509789 CCDC93Q567U6 631 aa16.98■□□□□ 0.31
CYSTM1-204ENST00000509789 SLC51AQ86UW1 340 aa16.98■□□□□ 0.31
CYSTM1-204ENST00000509789 XAGE2Q96GT9 111 aa16.98■□□□□ 0.31
CYSTM1-204ENST00000509789 KIAA1551Q9HCM1 1747 aa16.97■□□□□ 0.31
CYSTM1-204ENST00000509789 PDE4AP27815 886 aa16.97■□□□□ 0.31
CYSTM1-204ENST00000509789 TBC1D16Q8TBP0 767 aa16.97■□□□□ 0.31
CYSTM1-204ENST00000509789 DBNDD2Q9BQY9 259 aa16.97■□□□□ 0.31
CYSTM1-204ENST00000509789 ZNF609O15014 1411 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 MX1P20591 662 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 ADORA1P30542 326 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 RGS3P49796 1198 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 CAVIN4Q5BKX8 364 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 CCDC158Q5M9N0 1113 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 SUPT20HQ8NEM7 779 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 OTUD7AQ8TE49 926 aaPredicted RBP16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 EYA3Q99504 573 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 TLR7Q9NYK1 1049 aaKnown RBP16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 POLLQ9UGP5 575 aa16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 DBNLQ9UJU6 430 aaKnown RBP16.96■□□□□ 0.31
CYSTM1-204ENST00000509789 WTIPA6NIX2 430 aaPredicted RBP16.95■□□□□ 0.3
CYSTM1-204ENST00000509789 C15orf52Q6ZUT6 534 aaKnown RBP16.95■□□□□ 0.3
CYSTM1-204ENST00000509789 ECHDC1Q9NTX5 307 aa16.95■□□□□ 0.3
CYSTM1-204ENST00000509789 STAP2Q9UGK3 403 aa16.95■□□□□ 0.3
CYSTM1-204ENST00000509789 PDE1AP54750 535 aa16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 SKAP1Q86WV1 359 aa16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 VPS37DQ86XT2 251 aa16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 PSMD1Q99460 953 aa16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 ZC3H12CQ9C0D7 883 aaKnown RBP16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 GNL3LQ9NVN8 582 aaKnown RBP16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 CACNA1SQ13698 1873 aa16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 TTC41PQ6P2S7 1318 aa16.94■□□□□ 0.3
CYSTM1-204ENST00000509789 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
CYSTM1-204ENST00000509789 ERC2O15083 957 aa16.93■□□□□ 0.3
CYSTM1-204ENST00000509789 TTC39AQ5SRH9 613 aa16.93■□□□□ 0.3
CYSTM1-204ENST00000509789 FAM84BQ96KN1 310 aaPredicted RBP16.93■□□□□ 0.3
CYSTM1-204ENST00000509789 AOX1Q06278 1338 aa16.93■□□□□ 0.3
CYSTM1-204ENST00000509789 SALL3Q9BXA9 1300 aa16.93■□□□□ 0.3
CYSTM1-204ENST00000509789 UQCRFS1P1P0C7P4 283 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 HIBADHP31937 336 aaKnown RBP16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 GYG1P46976 350 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 BCAMP50895 628 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 CCDC102BQ68D86 513 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 ZNF804AQ7Z570 1209 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 GPR101Q96P66 508 aaPredicted RBP16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 OSBPL3Q9H4L5 887 aa16.92■□□□□ 0.3
CYSTM1-204ENST00000509789 BRCA1P38398 1863 aaKnown RBP16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 G3V3G9 751 aa16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 RIMBP2O15034 1052 aa16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 GLRX3O76003 335 aaKnown RBP16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 ATP5JP18859 108 aa16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 KLRK1P26718 216 aa16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 PHKA1P46020 1223 aa16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 DCAF8Q5TAQ9 597 aa16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 ZNF512BQ96KM6 892 aaPredicted RBP16.91■□□□□ 0.3
CYSTM1-204ENST00000509789 MED23Q9ULK4 1368 aa16.9■□□□□ 0.3
CYSTM1-204ENST00000509789 TSHZ3Q63HK5 1081 aa16.9■□□□□ 0.3
CYSTM1-204ENST00000509789 TXNRD3Q86VQ6 643 aa16.9■□□□□ 0.3
CYSTM1-204ENST00000509789 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
CYSTM1-204ENST00000509789 TAOK3Q9H2K8 898 aa16.9■□□□□ 0.3
CYSTM1-204ENST00000509789 IRS2Q9Y4H2 1338 aa16.9■□□□□ 0.3
CYSTM1-204ENST00000509789 SNED1Q8TER0 1413 aa16.89■□□□□ 0.29
CYSTM1-204ENST00000509789 FRAT2O75474 233 aaPredicted RBP16.89■□□□□ 0.29
CYSTM1-204ENST00000509789 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
CYSTM1-204ENST00000509789 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.89■□□□□ 0.29
CYSTM1-204ENST00000509789 COA1Q9GZY4 146 aa16.89■□□□□ 0.29
CYSTM1-204ENST00000509789 BOLA2Q9H3K6 86 aa16.89■□□□□ 0.29
CYSTM1-204ENST00000509789 A0A1B0GUL6 1792 aa16.89■□□□□ 0.29
CYSTM1-204ENST00000509789 SEMA3EO15041 775 aa16.88■□□□□ 0.29
CYSTM1-204ENST00000509789 PPIP5K2O43314 1243 aa16.88■□□□□ 0.29
CYSTM1-204ENST00000509789 ARID4AP29374 1257 aaPredicted RBP16.88■□□□□ 0.29
CYSTM1-204ENST00000509789 KIAA2012Q0VF49 1180 aa16.88■□□□□ 0.29
CYSTM1-204ENST00000509789 PI4K2BQ8TCG2 481 aa16.88■□□□□ 0.29
CYSTM1-204ENST00000509789 LTBP3Q9NS15 1303 aa16.88■□□□□ 0.29
CYSTM1-204ENST00000509789 GPR162Q16538 588 aa16.87■□□□□ 0.29
CYSTM1-204ENST00000509789 AOC3Q16853 763 aa16.87■□□□□ 0.29
CYSTM1-204ENST00000509789 TTC22Q5TAA0 569 aa16.87■□□□□ 0.29
CYSTM1-204ENST00000509789 LARGE2Q8N3Y3 721 aa16.87■□□□□ 0.29
CYSTM1-204ENST00000509789 CD209Q9NNX6 404 aa16.87■□□□□ 0.29
CYSTM1-204ENST00000509789 ZNF277Q9NRM2 450 aaPredicted RBP16.87■□□□□ 0.29
CYSTM1-204ENST00000509789 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
CYSTM1-204ENST00000509789 DUOX1Q9NRD9 1551 aa16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 NFKBIEO00221 500 aa16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 IARSP41252 1262 aaKnown RBP16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 DOK7Q18PE1 504 aa16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 TDRD7Q8NHU6 1098 aaKnown RBP16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 HAUS7Q99871 368 aa16.86■□□□□ 0.29
CYSTM1-204ENST00000509789 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms