RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 TAF1DQ9H5J8 278 aaPredicted RBP13.21□□□□□ -0.29
POLR2J3-213ENST00000508848 USP17L3A6NCW0 530 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 USP17L4A6NCW7 530 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 RIMBP2O15034 1052 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 IL15P40933 162 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 SCNN1DP51172 638 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 MVPQ14764 893 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 USP50Q70EL3 339 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 USP17L1Q7RTZ2 530 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 ATG9AQ7Z3C6 839 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 SSH3Q8TE77 659 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 ZNF526Q8TF50 670 aaPredicted RBP13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 ZC3H15Q8WU90 426 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 PUS3Q9BZE2 481 aaKnown RBP13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 GPRC5DQ9NZD1 345 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 PGAP2Q9UHJ9 254 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 TNNQ9UQP3 1299 aa13.2□□□□□ -0.3
POLR2J3-213ENST00000508848 MYO3BQ8WXR4 1341 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 SRGAP3O43295 1099 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 SASH1O94885 1247 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 FGFR2P21802 821 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 LMOD1P29536 600 aaPredicted RBP13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 KCNJ4P48050 445 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 POLA2Q14181 598 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 ZNF804AQ7Z570 1209 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 SMC1BQ8NDV3 1235 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 GMLQ99445 158 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 DBNDD1Q9H9R9 158 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 CD209Q9NNX6 404 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 ZBTB40Q9NUA8 1239 aa13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 NOP58Q9Y2X3 529 aaKnown RBP13.19□□□□□ -0.3
POLR2J3-213ENST00000508848 ADAMTSL1Q8N6G6 1762 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 WTIPA6NIX2 430 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 PSMD14O00487 310 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 TAF5LO75529 589 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 RAD17O75943 681 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 EPHX2P34913 555 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 DOK7Q18PE1 504 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 LRRC24Q50LG9 513 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 METTL24Q5JXM2 366 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 FBXO33Q7Z6M2 555 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 TXNRD3Q86VQ6 643 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 ITPRIPQ8IWB1 547 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 HELBQ8NG08 1087 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 TDRD7Q8NHU6 1098 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 LPIN2Q92539 896 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 ADARB2Q9NS39 739 aaKnown RBP13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
POLR2J3-213ENST00000508848 FAM205AQ6ZU69 1335 aa13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 HIBADHP31937 336 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 ZNF280AP59817 542 aaPredicted RBP13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 PUM3Q15397 648 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 TTLL5Q6EMB2 1281 aa13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 RSBN1LQ6PCB5 846 aaPredicted RBP13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 AKAP2Q9Y2D5 859 aa13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 GJA3Q9Y6H8 435 aa13.17□□□□□ -0.3
POLR2J3-213ENST00000508848 H7C1D1 291 aa13.16□□□□□ -0.3
POLR2J3-213ENST00000508848 IFIT1P09914 478 aaKnown RBP13.16□□□□□ -0.3
POLR2J3-213ENST00000508848 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
POLR2J3-213ENST00000508848 AAMPQ13685 434 aa13.16□□□□□ -0.3
POLR2J3-213ENST00000508848 CAVIN4Q5BKX8 364 aa13.16□□□□□ -0.3
POLR2J3-213ENST00000508848 DACT2Q5SW24 774 aa13.16□□□□□ -0.3
POLR2J3-213ENST00000508848 GPR108Q9NPR9 543 aa13.16□□□□□ -0.3
POLR2J3-213ENST00000508848 POLR2AP24928 1970 aaKnown RBP13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 PNMA6EA0A0J9YXQ4 647 aa13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 EPS15P42566 896 aa13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 KLHDC4Q8TBB5 520 aa13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 GPR101Q96P66 508 aaPredicted RBP13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 MRIQ9BWK5 157 aa13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
POLR2J3-213ENST00000508848 CEP350Q5VT06 3117 aa13.14□□□□□ -0.31
POLR2J3-213ENST00000508848 PLIN1O60240 522 aa13.14□□□□□ -0.31
POLR2J3-213ENST00000508848 HSP90AB4PQ58FF6 505 aa13.14□□□□□ -0.31
POLR2J3-213ENST00000508848 SUGT1Q9Y2Z0 365 aa13.14□□□□□ -0.31
POLR2J3-213ENST00000508848 SNAP23O00161 211 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 SEMA3EO15041 775 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 IGSF3O75054 1194 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 ITGBL1O95965 494 aaPredicted RBP13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 USP17L8P0C7I0 530 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 SLC5A1P13866 664 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 KLRK1P26718 216 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 G3BP1Q13283 466 aaKnown RBP eCLIP13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 CEP85Q6P2H3 762 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 OGFOD1Q8N543 542 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 MTMR14Q8NCE2 650 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 COG6Q9Y2V7 657 aa13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 PDS5AQ29RF7 1337 aaKnown RBP13.13□□□□□ -0.31
POLR2J3-213ENST00000508848 HMMRO75330 724 aa13.12□□□□□ -0.31
POLR2J3-213ENST00000508848 HSPA6P17066 643 aa13.12□□□□□ -0.31
POLR2J3-213ENST00000508848 HDLBPQ00341 1268 aaKnown RBP13.12□□□□□ -0.31
POLR2J3-213ENST00000508848 ATP2B3Q16720 1220 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms