RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 PSME4Q14997 1843 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 MYH13Q9UKX3 1938 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 SBF1O95248 1867 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 XDHP47989 1333 aa10.68□□□□□ -0.7
USP46-207ENST00000508499 A0A0G2JLW4 131 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 UBE4AQ14139 1066 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 LRRC24Q50LG9 513 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 KLHDC4Q8TBB5 520 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 RHPN1Q8TCX5 695 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 ZNF594Q96JF6 807 aaPredicted RBP10.67□□□□□ -0.7
USP46-207ENST00000508499 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
USP46-207ENST00000508499 RTFDC1Q9BY42 306 aaPredicted RBP10.67□□□□□ -0.7
USP46-207ENST00000508499 VPS33BQ9H267 617 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 PA2G4Q9UQ80 394 aaKnown RBP10.67□□□□□ -0.7
USP46-207ENST00000508499 AKAP2Q9Y2D5 859 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 LEMD3Q9Y2U8 911 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 ZNF609O15014 1411 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 LTBP3Q9NS15 1303 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 FGFR2P21802 821 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 CHRNDQ07001 517 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 DALRD3Q5D0E6 543 aaKnown RBP10.67□□□□□ -0.7
USP46-207ENST00000508499 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.7
USP46-207ENST00000508499 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
USP46-207ENST00000508499 LRRCC1Q9C099 1032 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 CNNM1Q9NRU3 951 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 PPP1R1BQ9UD71 204 aaPredicted RBP10.67□□□□□ -0.7
USP46-207ENST00000508499 EXOC6BQ9Y2D4 811 aa10.67□□□□□ -0.7
USP46-207ENST00000508499 CCDC88AQ3V6T2 1871 aa10.66□□□□□ -0.7
USP46-207ENST00000508499 IRS2Q9Y4H2 1338 aa10.66□□□□□ -0.7
USP46-207ENST00000508499 ZNF646O15015 1829 aaPredicted RBP10.66□□□□□ -0.7
USP46-207ENST00000508499 NUCB1Q02818 461 aa10.66□□□□□ -0.7
USP46-207ENST00000508499 PUM3Q15397 648 aaKnown RBP10.66□□□□□ -0.7
USP46-207ENST00000508499 RTKN2Q8IZC4 609 aa10.66□□□□□ -0.7
USP46-207ENST00000508499 PSMD1Q99460 953 aa10.66□□□□□ -0.7
USP46-207ENST00000508499 RTN4Q9NQC3 1192 aaKnown RBP10.66□□□□□ -0.7
USP46-207ENST00000508499 BMP2KQ9NSY1 1161 aaPredicted RBP10.66□□□□□ -0.7
USP46-207ENST00000508499 CEP126Q9P2H0 1117 aa10.66□□□□□ -0.7
USP46-207ENST00000508499 AKAP11Q9UKA4 1901 aa10.66□□□□□ -0.7
USP46-207ENST00000508499 CHD4Q14839 1912 aa10.65□□□□□ -0.7
USP46-207ENST00000508499 METTL24Q5JXM2 366 aa10.65□□□□□ -0.7
USP46-207ENST00000508499 CLASRPQ8N2M8 674 aaKnown RBP10.65□□□□□ -0.7
USP46-207ENST00000508499 NLGN2Q8NFZ4 835 aa10.65□□□□□ -0.7
USP46-207ENST00000508499 LPIN2Q92539 896 aa10.65□□□□□ -0.7
USP46-207ENST00000508499 SIL1Q9H173 461 aa10.65□□□□□ -0.7
USP46-207ENST00000508499 TMX4Q9H1E5 349 aaPredicted RBP10.65□□□□□ -0.7
USP46-207ENST00000508499 GTF3C3Q9Y5Q9 886 aa10.65□□□□□ -0.7
USP46-207ENST00000508499 MED23Q9ULK4 1368 aa10.64□□□□□ -0.71
USP46-207ENST00000508499 SALL3Q9BXA9 1300 aa10.64□□□□□ -0.71
USP46-207ENST00000508499 ATP2B4P23634 1241 aa10.64□□□□□ -0.71
USP46-207ENST00000508499 TFCP2Q12800 502 aa10.64□□□□□ -0.71
USP46-207ENST00000508499 CCDC93Q567U6 631 aa10.64□□□□□ -0.71
USP46-207ENST00000508499 CHD1LQ86WJ1 897 aa10.64□□□□□ -0.71
USP46-207ENST00000508499 ZNF512BQ96KM6 892 aaPredicted RBP10.64□□□□□ -0.71
USP46-207ENST00000508499 ZNF804BA4D1E1 1349 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 TIE1P35590 1138 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 OS9Q13438 667 aaPredicted RBP10.63□□□□□ -0.71
USP46-207ENST00000508499 TNNI3KQ59H18 835 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 MPNDQ8N594 471 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 SUPT20HQ8NEM7 779 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 KIF12Q96FN5 646 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 OSBPL3Q9H4L5 887 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 FPGT-TNNI3KV9GXZ4 949 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 DOCK2Q92608 1830 aa10.63□□□□□ -0.71
USP46-207ENST00000508499 AOX1Q06278 1338 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 A0A1B0GUL7 405 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 GPSM2P81274 684 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 ATP2B3Q16720 1220 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 B4GALNT3Q6L9W6 998 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 TBC1D16Q8TBP0 767 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 EAF2Q96CJ1 260 aaPredicted RBP10.62□□□□□ -0.71
USP46-207ENST00000508499 TSPYL2Q9H2G4 693 aaPredicted RBP10.62□□□□□ -0.71
USP46-207ENST00000508499 ANKIB1Q9P2G1 1089 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 STAP2Q9UGK3 403 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 GGA1Q9UJY5 639 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.62□□□□□ -0.71
USP46-207ENST00000508499 AK9Q5TCS8 1911 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 PDS5AQ29RF7 1337 aaKnown RBP10.62□□□□□ -0.71
USP46-207ENST00000508499 TTC41PQ6P2S7 1318 aa10.62□□□□□ -0.71
USP46-207ENST00000508499 C21orf2O43822 256 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 IGSF3O75054 1194 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 IFIT1P09914 478 aaKnown RBP10.61□□□□□ -0.71
USP46-207ENST00000508499 SLC5A1P13866 664 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 FKBP4Q02790 459 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP46-207ENST00000508499 ANKRD45Q5TZF3 282 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 DPP8Q6V1X1 898 aaPredicted RBP10.61□□□□□ -0.71
USP46-207ENST00000508499 TICAM2Q86XR7 235 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.61□□□□□ -0.71
USP46-207ENST00000508499 EYA3Q99504 573 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 POLLQ9UGP5 575 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 NSFL1CQ9UNZ2 370 aaKnown RBP10.61□□□□□ -0.71
USP46-207ENST00000508499 MYH7P12883 1935 aa10.61□□□□□ -0.71
USP46-207ENST00000508499 SEMA3EO15041 775 aa10.6□□□□□ -0.71
USP46-207ENST00000508499 TAF5LO75529 589 aa10.6□□□□□ -0.71
USP46-207ENST00000508499 KIAA2012Q0VF49 1180 aa10.6□□□□□ -0.71
USP46-207ENST00000508499 FBXO33Q7Z6M2 555 aa10.6□□□□□ -0.71
USP46-207ENST00000508499 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
USP46-207ENST00000508499 DBNLQ9UJU6 430 aaKnown RBP10.6□□□□□ -0.71
USP46-207ENST00000508499 TIAM2Q8IVF5 1701 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 SRCAPQ6ZRS2 3230 aa10.59□□□□□ -0.71
USP46-207ENST00000508499 UFL1O94874 794 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms