RNA–Protein interactions for RNA: ENST00000508382.1

SGCA-206, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 410 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-206ENST00000508382 C6orf229H3BNL8 230 aa17.2■□□□□ 0.34
SGCA-206ENST00000508382 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
SGCA-206ENST00000508382 ANXA1P04083 346 aa17.2■□□□□ 0.34
SGCA-206ENST00000508382 RARSP54136 660 aaKnown RBP17.2■□□□□ 0.34
SGCA-206ENST00000508382 TBC1D16Q8TBP0 767 aa17.19■□□□□ 0.34
SGCA-206ENST00000508382 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
SGCA-206ENST00000508382 PITPNM2Q9BZ72 1349 aa17.19■□□□□ 0.34
SGCA-206ENST00000508382 PTPN12Q05209 780 aaKnown RBP17.18■□□□□ 0.34
SGCA-206ENST00000508382 ALDH1L2Q3SY69 923 aa17.18■□□□□ 0.34
SGCA-206ENST00000508382 TMC4Q7Z404 712 aa17.18■□□□□ 0.34
SGCA-206ENST00000508382 ARMC5Q96C12 935 aa17.18■□□□□ 0.34
SGCA-206ENST00000508382 GMLQ99445 158 aa17.18■□□□□ 0.34
SGCA-206ENST00000508382 PTPN22Q9Y2R2 807 aa17.18■□□□□ 0.34
SGCA-206ENST00000508382 H0YGN5 161 aa17.17■□□□□ 0.34
SGCA-206ENST00000508382 B4GALNT3Q6L9W6 998 aa17.17■□□□□ 0.34
SGCA-206ENST00000508382 EXOC6Q8TAG9 804 aa17.17■□□□□ 0.34
SGCA-206ENST00000508382 MYOZ2Q9NPC6 264 aa17.17■□□□□ 0.34
SGCA-206ENST00000508382 ERBB4Q15303 1308 aa17.17■□□□□ 0.34
SGCA-206ENST00000508382 ZNF853P0CG23 659 aa17.16■□□□□ 0.34
SGCA-206ENST00000508382 SREBF2Q12772 1141 aa17.16■□□□□ 0.34
SGCA-206ENST00000508382 NBPF9Q3BBW0 867 aa17.16■□□□□ 0.34
SGCA-206ENST00000508382 RSBN1LQ6PCB5 846 aaPredicted RBP17.16■□□□□ 0.34
SGCA-206ENST00000508382 SLC17A8Q8NDX2 589 aa17.16■□□□□ 0.34
SGCA-206ENST00000508382 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
SGCA-206ENST00000508382 SH3TC1Q8TE82 1336 aa17.16■□□□□ 0.34
SGCA-206ENST00000508382 EXOSC9Q06265 439 aaKnown RBP17.15■□□□□ 0.34
SGCA-206ENST00000508382 TTLL12Q14166 644 aaPredicted RBP17.15■□□□□ 0.34
SGCA-206ENST00000508382 AGBL3Q8NEM8 1001 aa17.15■□□□□ 0.34
SGCA-206ENST00000508382 TSR2Q969E8 191 aaKnown RBP17.15■□□□□ 0.34
SGCA-206ENST00000508382 CRBNQ96SW2 442 aa17.15■□□□□ 0.34
SGCA-206ENST00000508382 FZD1Q9UP38 647 aa17.15■□□□□ 0.34
SGCA-206ENST00000508382 IGF2BP3O00425 579 aaKnown RBP eCLIP17.14■□□□□ 0.33
SGCA-206ENST00000508382 IPO8O15397 1037 aaKnown RBP17.14■□□□□ 0.33
SGCA-206ENST00000508382 PLIN1O60240 522 aa17.14■□□□□ 0.33
SGCA-206ENST00000508382 SPRYD7Q5W111 196 aa17.14■□□□□ 0.33
SGCA-206ENST00000508382 CD99L2Q8TCZ2 262 aa17.14■□□□□ 0.33
SGCA-206ENST00000508382 EYA3Q99504 573 aa17.14■□□□□ 0.33
SGCA-206ENST00000508382 ZSWIM8A7E2V4 1837 aa17.14■□□□□ 0.33
SGCA-206ENST00000508382 LAMA3Q16787 3333 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 BCAR3O75815 825 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 TCIRG1Q13488 830 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 PRKG1Q13976 671 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 SF3B3Q15393 1217 aaKnown RBP17.13■□□□□ 0.33
SGCA-206ENST00000508382 ZKSCAN2Q63HK3 967 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 SMC4Q9NTJ3 1288 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 BABAM1Q9NWV8 329 aa17.13■□□□□ 0.33
SGCA-206ENST00000508382 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
SGCA-206ENST00000508382 LDLRAD1Q5T700 205 aa17.12■□□□□ 0.33
SGCA-206ENST00000508382 COPS6Q7L5N1 327 aa17.12■□□□□ 0.33
SGCA-206ENST00000508382 IFNL1Q8IU54 200 aa17.12■□□□□ 0.33
SGCA-206ENST00000508382 RBM27Q9P2N5 1060 aaKnown RBP17.12■□□□□ 0.33
SGCA-206ENST00000508382 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
SGCA-206ENST00000508382 ZNF333Q96JL9 665 aa17.11■□□□□ 0.33
SGCA-206ENST00000508382 ZC3H12CQ9C0D7 883 aaKnown RBP17.11■□□□□ 0.33
SGCA-206ENST00000508382 ALDH1A1P00352 501 aa17.1■□□□□ 0.33
SGCA-206ENST00000508382 AIMP1Q12904 312 aaKnown RBP17.1■□□□□ 0.33
SGCA-206ENST00000508382 XAGE3Q8WTP9 111 aa17.1■□□□□ 0.33
SGCA-206ENST00000508382 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
SGCA-206ENST00000508382 CHMP4BQ9H444 224 aaKnown RBP17.1■□□□□ 0.33
SGCA-206ENST00000508382 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
SGCA-206ENST00000508382 PODXL2Q9NZ53 605 aa17.1■□□□□ 0.33
SGCA-206ENST00000508382 LAS1LQ9Y4W2 734 aaKnown RBP17.1■□□□□ 0.33
SGCA-206ENST00000508382 UFL1O94874 794 aa17.09■□□□□ 0.33
SGCA-206ENST00000508382 HSP90AB3PQ58FF7 597 aa17.09■□□□□ 0.33
SGCA-206ENST00000508382 FTSJ3Q8IY81 847 aaKnown RBP17.09■□□□□ 0.33
SGCA-206ENST00000508382 FRAT1Q92837 279 aaPredicted RBP17.09■□□□□ 0.33
SGCA-206ENST00000508382 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
SGCA-206ENST00000508382 CHMP4AQ9BY43 222 aa17.09■□□□□ 0.33
SGCA-206ENST00000508382 SSC5DA1L4H1 1573 aa17.08■□□□□ 0.32
SGCA-206ENST00000508382 WTIPA6NIX2 430 aaPredicted RBP17.08■□□□□ 0.32
SGCA-206ENST00000508382 CHL1O00533 1208 aa17.08■□□□□ 0.32
SGCA-206ENST00000508382 WNT10BO00744 389 aa17.08■□□□□ 0.32
SGCA-206ENST00000508382 CRHR2Q13324 411 aa17.08■□□□□ 0.32
SGCA-206ENST00000508382 CENPQQ7L2Z9 268 aaPredicted RBP17.08■□□□□ 0.32
SGCA-206ENST00000508382 ERO1AQ96HE7 468 aa17.08■□□□□ 0.32
SGCA-206ENST00000508382 EFCC1Q9HA90 598 aa17.08■□□□□ 0.32
SGCA-206ENST00000508382 OTOFQ9HC10 1997 aa17.08■□□□□ 0.32
SGCA-206ENST00000508382 RPS8P62241 208 aaKnown RBP17.07■□□□□ 0.32
SGCA-206ENST00000508382 C20orf194Q5TEA3 1177 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 NECTIN2Q92692 538 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 CLMNQ96JQ2 1002 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 TMEM106CQ9BVX2 250 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 SEC31BQ9NQW1 1179 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 ANGEL1Q9UNK9 670 aaKnown RBP17.07■□□□□ 0.32
SGCA-206ENST00000508382 SPEF2Q9C093 1822 aa17.07■□□□□ 0.32
SGCA-206ENST00000508382 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
SGCA-206ENST00000508382 MANSC4A6NHS7 340 aaPredicted RBP17.06■□□□□ 0.32
SGCA-206ENST00000508382 SASH1O94885 1247 aa17.06■□□□□ 0.32
SGCA-206ENST00000508382 TWISTNBQ3B726 338 aaPredicted RBP17.06■□□□□ 0.32
SGCA-206ENST00000508382 RTL5Q5HYW3 569 aaPredicted RBP17.06■□□□□ 0.32
SGCA-206ENST00000508382 ARMC9Q7Z3E5 817 aa17.06■□□□□ 0.32
SGCA-206ENST00000508382 DZIP1LQ8IYY4 767 aaKnown RBP17.06■□□□□ 0.32
SGCA-206ENST00000508382 SSH1Q8WYL5 1049 aa17.06■□□□□ 0.32
SGCA-206ENST00000508382 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
SGCA-206ENST00000508382 UNC80Q8N2C7 3258 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 USP17L3A6NCW0 530 aa17.05■□□□□ 0.32
SGCA-206ENST00000508382 USP17L4A6NCW7 530 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms