RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 ANXA1P04083 346 aa11.99□□□□□ -0.49
CAST-220ENST00000508117 DOK7Q18PE1 504 aa11.99□□□□□ -0.49
CAST-220ENST00000508117 INTS3Q68E01 1043 aaKnown RBP11.99□□□□□ -0.49
CAST-220ENST00000508117 RSBN1LQ6PCB5 846 aaPredicted RBP11.99□□□□□ -0.49
CAST-220ENST00000508117 GMLQ99445 158 aa11.99□□□□□ -0.49
CAST-220ENST00000508117 RBBP6Q7Z6E9 1792 aaKnown RBP11.99□□□□□ -0.49
CAST-220ENST00000508117 FKTNO75072 461 aa11.98□□□□□ -0.49
CAST-220ENST00000508117 RPS8P62241 208 aaKnown RBP11.98□□□□□ -0.49
CAST-220ENST00000508117 SREBF2Q12772 1141 aa11.98□□□□□ -0.49
CAST-220ENST00000508117 ISCA1Q9BUE6 129 aa11.98□□□□□ -0.49
CAST-220ENST00000508117 KIAA0100Q14667 2235 aaKnown RBP11.98□□□□□ -0.49
CAST-220ENST00000508117 COL4A1P02462 1669 aa11.97□□□□□ -0.49
CAST-220ENST00000508117 USP17L8P0C7I0 530 aa11.97□□□□□ -0.49
CAST-220ENST00000508117 AIMP1Q12904 312 aaKnown RBP11.97□□□□□ -0.49
CAST-220ENST00000508117 TRIM28Q13263 835 aaKnown RBP11.97□□□□□ -0.49
CAST-220ENST00000508117 PLBD2Q8NHP8 589 aa11.97□□□□□ -0.49
CAST-220ENST00000508117 MYOZ2Q9NPC6 264 aa11.97□□□□□ -0.49
CAST-220ENST00000508117 MAPK8IP3Q9UPT6 1336 aa11.96□□□□□ -0.49
CAST-220ENST00000508117 UBE2Q2LH0YL09 131 aa11.96□□□□□ -0.49
CAST-220ENST00000508117 ALDH1A1P00352 501 aa11.96□□□□□ -0.49
CAST-220ENST00000508117 MMP14P50281 582 aa11.96□□□□□ -0.49
CAST-220ENST00000508117 OTUD5Q96G74 571 aa11.96□□□□□ -0.49
CAST-220ENST00000508117 FAM89AQ96GI7 184 aa11.96□□□□□ -0.49
CAST-220ENST00000508117 MKI67P46013 3256 aaKnown RBP11.96□□□□□ -0.49
CAST-220ENST00000508117 LAMB1P07942 1786 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 HTTP42858 3142 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 G3V3G9 751 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 UFL1O94874 794 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
CAST-220ENST00000508117 NF2P35240 595 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 ANKRD13DQ6ZTN6 518 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 MOB2Q70IA6 237 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 PODNQ7Z5L7 613 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 GGA1Q9UJY5 639 aa11.95□□□□□ -0.5
CAST-220ENST00000508117 TTLL13PA6NNM8 815 aa11.94□□□□□ -0.5
CAST-220ENST00000508117 IRS4O14654 1257 aaPredicted RBP11.94□□□□□ -0.5
CAST-220ENST00000508117 FXR1P51114 621 aaKnown RBP eCLIP11.94□□□□□ -0.5
CAST-220ENST00000508117 INHBEP58166 350 aa11.94□□□□□ -0.5
CAST-220ENST00000508117 USP17L3A6NCW0 530 aa11.93□□□□□ -0.5
CAST-220ENST00000508117 USP17L4A6NCW7 530 aa11.93□□□□□ -0.5
CAST-220ENST00000508117 HOXB7P09629 217 aa11.93□□□□□ -0.5
CAST-220ENST00000508117 LMOD3Q0VAK6 560 aa11.93□□□□□ -0.5
CAST-220ENST00000508117 USP17L1Q7RTZ2 530 aa11.93□□□□□ -0.5
CAST-220ENST00000508117 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
CAST-220ENST00000508117 CCER1Q8TC90 406 aaPredicted RBP11.93□□□□□ -0.5
CAST-220ENST00000508117 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
CAST-220ENST00000508117 RIPK4P57078 832 aa11.92□□□□□ -0.5
CAST-220ENST00000508117 TTLL12Q14166 644 aaPredicted RBP11.92□□□□□ -0.5
CAST-220ENST00000508117 NBPF9Q3BBW0 867 aa11.92□□□□□ -0.5
CAST-220ENST00000508117 LDLRAD1Q5T700 205 aa11.92□□□□□ -0.5
CAST-220ENST00000508117 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
CAST-220ENST00000508117 ARMC9Q7Z3E5 817 aa11.92□□□□□ -0.5
CAST-220ENST00000508117 ZBTB38Q8NAP3 1195 aaPredicted RBP11.92□□□□□ -0.5
CAST-220ENST00000508117 R3HDMLQ9H3Y0 253 aa11.92□□□□□ -0.5
CAST-220ENST00000508117 CHPF2Q9P2E5 772 aa11.92□□□□□ -0.5
CAST-220ENST00000508117 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
CAST-220ENST00000508117 ZNF646O15015 1829 aaPredicted RBP11.92□□□□□ -0.5
CAST-220ENST00000508117 XDHP47989 1333 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 MYO3BQ8WXR4 1341 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 POTEFA5A3E0 1075 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 MANSC4A6NHS7 340 aaPredicted RBP11.91□□□□□ -0.5
CAST-220ENST00000508117 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 CHL1O00533 1208 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 WNT10BO00744 389 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 PYGBP11216 843 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 PTPN12Q05209 780 aaKnown RBP11.91□□□□□ -0.5
CAST-220ENST00000508117 OTOP1Q7RTM1 612 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 OGFOD1Q8N543 542 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 ARMC5Q96C12 935 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 TRIM17Q9Y577 477 aa11.91□□□□□ -0.5
CAST-220ENST00000508117 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
CAST-220ENST00000508117 UNCXA6NJT0 531 aa11.9□□□□□ -0.5
CAST-220ENST00000508117 MAP3K11Q16584 847 aa11.9□□□□□ -0.5
CAST-220ENST00000508117 CCDC152Q4G0S7 254 aa11.9□□□□□ -0.5
CAST-220ENST00000508117 PRAMEF18Q5VWM3 479 aa11.9□□□□□ -0.5
CAST-220ENST00000508117 APOBEC3FQ8IUX4 373 aaKnown RBP11.9□□□□□ -0.5
CAST-220ENST00000508117 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
CAST-220ENST00000508117 HYPKQ9NX55 129 aa11.9□□□□□ -0.5
CAST-220ENST00000508117 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
CAST-220ENST00000508117 ZBTB48P10074 688 aaPredicted RBP11.89□□□□□ -0.51
CAST-220ENST00000508117 MKRN3Q13064 507 aaKnown RBP11.89□□□□□ -0.51
CAST-220ENST00000508117 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 HDGFL1Q5TGJ6 251 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 STRIP1Q5VSL9 837 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 ERO1AQ96HE7 468 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 SCAF8Q9UPN6 1271 aaKnown RBP11.89□□□□□ -0.51
CAST-220ENST00000508117 PTPN22Q9Y2R2 807 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 CEP290O15078 2479 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 CENPFP49454 3210 aa11.89□□□□□ -0.51
CAST-220ENST00000508117 PDE8AO60658 829 aa11.88□□□□□ -0.51
CAST-220ENST00000508117 PCCAP05165 728 aaPredicted RBP11.88□□□□□ -0.51
CAST-220ENST00000508117 TMPOP42166 694 aaKnown RBP11.88□□□□□ -0.51
CAST-220ENST00000508117 RTL5Q5HYW3 569 aaPredicted RBP11.88□□□□□ -0.51
CAST-220ENST00000508117 MAMSTRQ6ZN01 415 aa11.88□□□□□ -0.51
CAST-220ENST00000508117 ANKRD18AQ8IVF6 992 aa11.88□□□□□ -0.51
CAST-220ENST00000508117 ZBED3Q96IU2 234 aaPredicted RBP11.88□□□□□ -0.51
CAST-220ENST00000508117 TRIM35Q9UPQ4 493 aa11.88□□□□□ -0.51
CAST-220ENST00000508117 TRIOBPQ9H2D6 2365 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms