RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 RAB11FIP3O75154 756 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 SLC5A1P13866 664 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 KCNA3P22001 575 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 GPSM2P81274 684 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 TFCP2Q12800 502 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 ANKRD45Q5TZF3 282 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 CC2D2BQ6DHV5 1058 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 ARHGAP27Q6ZUM4 889 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 KIF1BPQ96EK5 621 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 LRRCC1Q9C099 1032 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 IL1RAPL2Q9NP60 686 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 STK24Q9Y6E0 443 aa11.13□□□□□ -0.63
SMAD1-207ENST00000507594 LRRC37AA6NMS7 1700 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
SMAD1-207ENST00000507594 SMARCA5O60264 1052 aaPredicted RBP11.12□□□□□ -0.63
SMAD1-207ENST00000507594 IGHDP01880 384 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 IFIT2P09913 472 aaKnown RBP11.12□□□□□ -0.63
SMAD1-207ENST00000507594 IFIT1P09914 478 aaKnown RBP11.12□□□□□ -0.63
SMAD1-207ENST00000507594 ATP2B4P23634 1241 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 PUM3Q15397 648 aaKnown RBP11.12□□□□□ -0.63
SMAD1-207ENST00000507594 ATP2B3Q16720 1220 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 SLC51AQ86UW1 340 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 VPS37DQ86XT2 251 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 RTKN2Q8IZC4 609 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 CLASRPQ8N2M8 674 aaKnown RBP11.12□□□□□ -0.63
SMAD1-207ENST00000507594 SUPT20HQ8NEM7 779 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 RHPN1Q8TCX5 695 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
SMAD1-207ENST00000507594 EYA3Q99504 573 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 A0A1B0GUL6 1792 aa11.12□□□□□ -0.63
SMAD1-207ENST00000507594 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
SMAD1-207ENST00000507594 FRAT2O75474 233 aaPredicted RBP11.11□□□□□ -0.63
SMAD1-207ENST00000507594 CENPQQ7L2Z9 268 aaPredicted RBP11.11□□□□□ -0.63
SMAD1-207ENST00000507594 ATG9AQ7Z3C6 839 aa11.11□□□□□ -0.63
SMAD1-207ENST00000507594 AACSQ86V21 672 aa11.11□□□□□ -0.63
SMAD1-207ENST00000507594 FBXW7Q969H0 707 aa11.11□□□□□ -0.63
SMAD1-207ENST00000507594 GPR101Q96P66 508 aaPredicted RBP11.11□□□□□ -0.63
SMAD1-207ENST00000507594 TAOK3Q9H2K8 898 aa11.11□□□□□ -0.63
SMAD1-207ENST00000507594 DCTPP1Q9H773 170 aa11.11□□□□□ -0.63
SMAD1-207ENST00000507594 NOP58Q9Y2X3 529 aaKnown RBP11.11□□□□□ -0.63
SMAD1-207ENST00000507594 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
SMAD1-207ENST00000507594 ZNF804BA4D1E1 1349 aa11.1□□□□□ -0.63
SMAD1-207ENST00000507594 PPIP5K2O43314 1243 aa11.1□□□□□ -0.63
SMAD1-207ENST00000507594 PDE8BO95263 885 aa11.1□□□□□ -0.63
SMAD1-207ENST00000507594 GRIPAP1Q4V328 841 aa11.1□□□□□ -0.63
SMAD1-207ENST00000507594 GPATCH3Q96I76 525 aa11.1□□□□□ -0.63
SMAD1-207ENST00000507594 ZC3H12CQ9C0D7 883 aaKnown RBP11.1□□□□□ -0.63
SMAD1-207ENST00000507594 LNPKQ9C0E8 428 aa11.1□□□□□ -0.63
SMAD1-207ENST00000507594 LEMD3Q9Y2U8 911 aa11.1□□□□□ -0.63
SMAD1-207ENST00000507594 ZNF609O15014 1411 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 A0A1B0GUL7 405 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 SASH1O94885 1247 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 FKBP4Q02790 459 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMAD1-207ENST00000507594 RASSF7Q02833 373 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 TNNI3KQ59H18 835 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 CAVIN4Q5BKX8 364 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 LARGE2Q8N3Y3 721 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 TBC1D16Q8TBP0 767 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 LPIN2Q92539 896 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 CCDC8Q9H0W5 538 aaPredicted RBP11.09□□□□□ -0.63
SMAD1-207ENST00000507594 ZNF277Q9NRM2 450 aaPredicted RBP11.09□□□□□ -0.63
SMAD1-207ENST00000507594 FPGT-TNNI3KV9GXZ4 949 aa11.09□□□□□ -0.63
SMAD1-207ENST00000507594 SNAP23O00161 211 aa11.08□□□□□ -0.64
SMAD1-207ENST00000507594 GRIN3BO60391 1043 aa11.08□□□□□ -0.64
SMAD1-207ENST00000507594 YBX3P16989 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMAD1-207ENST00000507594 TIMM10P62072 90 aa11.08□□□□□ -0.64
SMAD1-207ENST00000507594 UBE4AQ14139 1066 aa11.08□□□□□ -0.64
SMAD1-207ENST00000507594 WASHC4Q2M389 1173 aa11.08□□□□□ -0.64
SMAD1-207ENST00000507594 TTC39AQ5SRH9 613 aa11.08□□□□□ -0.64
SMAD1-207ENST00000507594 ZNF804AQ7Z570 1209 aa11.08□□□□□ -0.64
SMAD1-207ENST00000507594 AOC3Q16853 763 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 CCDC158Q5M9N0 1113 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
SMAD1-207ENST00000507594 CHD1LQ86WJ1 897 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 SMC5Q8IY18 1101 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 NIM1KQ8IY84 436 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 C7orf43Q8WVR3 580 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 JDP2Q8WYK2 163 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 PSMD1Q99460 953 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 GNL3LQ9NVN8 582 aaKnown RBP11.07□□□□□ -0.64
SMAD1-207ENST00000507594 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 POLLQ9UGP5 575 aa11.07□□□□□ -0.64
SMAD1-207ENST00000507594 ARAP2Q8WZ64 1704 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 FER1L6Q2WGJ9 1857 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 MED23Q9ULK4 1368 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 MYH13Q9UKX3 1938 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 KLRK1P26718 216 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 ADORA1P30542 326 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 IARSP41252 1262 aaKnown RBP11.06□□□□□ -0.64
SMAD1-207ENST00000507594 GYG1P46976 350 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 CHAF1AQ13111 956 aaPredicted RBP11.06□□□□□ -0.64
SMAD1-207ENST00000507594 DOK7Q18PE1 504 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 VGLL2Q8N8G2 317 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 XAGE2Q96GT9 111 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 DBNDD2Q9BQY9 259 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 DBNDD1Q9H9R9 158 aa11.06□□□□□ -0.64
SMAD1-207ENST00000507594 GPR108Q9NPR9 543 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms