RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
SCAMP1-202ENST00000506858 ADORA1P30542 326 aa10.94□□□□□ -0.66
SCAMP1-202ENST00000506858 DOK7Q18PE1 504 aa10.94□□□□□ -0.66
SCAMP1-202ENST00000506858 SKAP1Q86WV1 359 aa10.94□□□□□ -0.66
SCAMP1-202ENST00000506858 VGLL2Q8N8G2 317 aa10.94□□□□□ -0.66
SCAMP1-202ENST00000506858 TMX4Q9H1E5 349 aaPredicted RBP10.94□□□□□ -0.66
SCAMP1-202ENST00000506858 CEP126Q9P2H0 1117 aa10.94□□□□□ -0.66
SCAMP1-202ENST00000506858 GGA1Q9UJY5 639 aa10.94□□□□□ -0.66
SCAMP1-202ENST00000506858 SNED1Q8TER0 1413 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 CIAO1O76071 339 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 IL15P40933 162 aaPredicted RBP10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 KCNJ4P48050 445 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 AOC3Q16853 763 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 C16orf71Q8IYS4 520 aaPredicted RBP10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 DCBLD2Q96PD2 775 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 DCTPP1Q9H773 170 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 ZNF804BA4D1E1 1349 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 XDHP47989 1333 aa10.93□□□□□ -0.66
SCAMP1-202ENST00000506858 PDE8BO95263 885 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 GYG1P46976 350 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 HDAC1Q13547 482 aaPredicted RBP10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 TMC4Q7Z404 712 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 RTKN2Q8IZC4 609 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 NEUROD6Q96NK8 337 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 ANKRD2Q9GZV1 360 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 CCDC8Q9H0W5 538 aaPredicted RBP10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 TAOK3Q9H2K8 898 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 KCNQ5Q9NR82 932 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 TLR7Q9NYK1 1049 aaKnown RBP10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 IQSEC3Q9UPP2 1182 aaPredicted RBP10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 MROH5Q6ZUA9 1318 aa10.92□□□□□ -0.66
SCAMP1-202ENST00000506858 ANKRD45Q5TZF3 282 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 CC2D2BQ6DHV5 1058 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 RHPN1Q8TCX5 695 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 EAF2Q96CJ1 260 aaPredicted RBP10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 RWDD1Q9H446 243 aaPredicted RBP10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 DBNDD1Q9H9R9 158 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 PODXL2Q9NZ53 605 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 JAG2Q9Y219 1238 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 A0A1B0GUL7 405 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 PPIP5K2O43314 1243 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 FGFR2P21802 821 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 ATP2B4P23634 1241 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 BCAMP50895 628 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 ATP2B3Q16720 1220 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 WASHC4Q2M389 1173 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 OTUD7AQ8TE49 926 aaPredicted RBP10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 DBNDD2Q9BQY9 259 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 TSPYL2Q9H2G4 693 aaPredicted RBP10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 DUOX1Q9NRD9 1551 aa10.91□□□□□ -0.66
SCAMP1-202ENST00000506858 COL4A5P29400 1685 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 GRIN3BO60391 1043 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 IARSP41252 1262 aaKnown RBP10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 AAMPQ13685 434 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 TNNI3KQ59H18 835 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 SOGA3Q5TF21 947 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 C9orf131Q5VYM1 1079 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 LARGE2Q8N3Y3 721 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 CCDC136Q96JN2 1154 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 RTFDC1Q9BY42 306 aaPredicted RBP10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 ZC3H12CQ9C0D7 883 aaKnown RBP10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 RNF181Q9P0P0 153 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 LEMD3Q9Y2U8 911 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 FPGT-TNNI3KV9GXZ4 949 aa10.9□□□□□ -0.66
SCAMP1-202ENST00000506858 IRS2Q9Y4H2 1338 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 PHKA1P46020 1223 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 UBE4AQ14139 1066 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 PUM3Q15397 648 aaKnown RBP10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 TSHZ3Q63HK5 1081 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 AACSQ86V21 672 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 FAM212AQ96EL1 285 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 XAGE2Q96GT9 111 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 FAM84BQ96KN1 310 aaPredicted RBP10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 PSMD1Q99460 953 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 LNPKQ9C0E8 428 aa10.89□□□□□ -0.67
SCAMP1-202ENST00000506858 RAB11FIP3O75154 756 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 SMC5Q8IY18 1101 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 LPIN2Q92539 896 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 MXD3Q9BW11 206 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 LRRCC1Q9C099 1032 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 DBNLQ9UJU6 430 aaKnown RBP10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 GTF3C3Q9Y5Q9 886 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 ARFGEF1Q9Y6D6 1849 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 LRRC37AA6NMS7 1700 aa10.88□□□□□ -0.67
SCAMP1-202ENST00000506858 YDJCA8MPS7 323 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 RAD17O75943 681 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 IFIT1P09914 478 aaKnown RBP10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 SLC5A1P13866 664 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 LMNB1P20700 586 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 KIAA2012Q0VF49 1180 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 HSP90AB4PQ58FF6 505 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 ERC1Q8IUD2 1116 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 NDUFB9Q9Y6M9 179 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 FER1L6Q2WGJ9 1857 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 LTBP1Q14766 1721 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 G3V3G9 751 aa10.87□□□□□ -0.67
SCAMP1-202ENST00000506858 ECE2O60344 883 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms