RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 FOXO4P98177 505 aa16.51■□□□□ 0.23
TCOF1-209ENST00000506630 TRPM4Q8TD43 1214 aa16.51■□□□□ 0.23
TCOF1-209ENST00000506630 SUCLG2Q96I99 432 aa16.51■□□□□ 0.23
TCOF1-209ENST00000506630 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
TCOF1-209ENST00000506630 ANKRD18BA2A2Z9 1011 aa16.5■□□□□ 0.23
TCOF1-209ENST00000506630 IPO8O15397 1037 aaKnown RBP16.5■□□□□ 0.23
TCOF1-209ENST00000506630 EPHA10Q5JZY3 1008 aa16.5■□□□□ 0.23
TCOF1-209ENST00000506630 LMBR1LQ6UX01 489 aa16.5■□□□□ 0.23
TCOF1-209ENST00000506630 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
TCOF1-209ENST00000506630 ANKIB1Q9P2G1 1089 aa16.5■□□□□ 0.23
TCOF1-209ENST00000506630 PSME4Q14997 1843 aa16.49■□□□□ 0.23
TCOF1-209ENST00000506630 UTYO14607 1347 aa16.49■□□□□ 0.23
TCOF1-209ENST00000506630 C6orf229H3BNL8 230 aa16.49■□□□□ 0.23
TCOF1-209ENST00000506630 RIMBP2O15034 1052 aa16.49■□□□□ 0.23
TCOF1-209ENST00000506630 IFIT5Q13325 482 aaKnown RBP16.49■□□□□ 0.23
TCOF1-209ENST00000506630 MICALL2Q8IY33 904 aa16.49■□□□□ 0.23
TCOF1-209ENST00000506630 CNKSR2Q8WXI2 1034 aa16.49■□□□□ 0.23
TCOF1-209ENST00000506630 ARHGAP45Q92619 1136 aa16.49■□□□□ 0.23
TCOF1-209ENST00000506630 DPF2Q92785 391 aa16.48■□□□□ 0.23
TCOF1-209ENST00000506630 MPHOSPH8Q99549 860 aa16.48■□□□□ 0.23
TCOF1-209ENST00000506630 BSDC1Q9NW68 430 aaPredicted RBP16.48■□□□□ 0.23
TCOF1-209ENST00000506630 SCN9AQ15858 1988 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 XDHP47989 1333 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 UFL1O94874 794 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 TRIM27P14373 513 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 WASHC4Q2M389 1173 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 CCDC57Q2TAC2 916 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 TAF7LQ5H9L4 462 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 ZKSCAN2Q63HK3 967 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 RGMBQ6NW40 437 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 ATF7IPQ6VMQ6 1270 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 KRT26Q7Z3Y9 468 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 C2orf69Q8N8R5 385 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 TBC1D16Q8TBP0 767 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 CCDC102AQ96A19 550 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 KAZALD1Q96I82 304 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 ZIC5Q96T25 663 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 EYA3Q99504 573 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 USP44Q9H0E7 712 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 BICC1Q9H694 974 aaKnown RBP16.47■□□□□ 0.23
TCOF1-209ENST00000506630 DBNDD1Q9H9R9 158 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 PODXL2Q9NZ53 605 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 GGA1Q9UJY5 639 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 TNNQ9UQP3 1299 aa16.47■□□□□ 0.23
TCOF1-209ENST00000506630 ZBTB12Q9Y330 459 aaPredicted RBP16.47■□□□□ 0.23
TCOF1-209ENST00000506630 DOK7Q18PE1 504 aa16.46■□□□□ 0.23
TCOF1-209ENST00000506630 DLK2Q6UY11 383 aa16.46■□□□□ 0.23
TCOF1-209ENST00000506630 SAMD7Q7Z3H4 446 aa16.46■□□□□ 0.23
TCOF1-209ENST00000506630 CLUAP1Q96AJ1 413 aa16.46■□□□□ 0.23
TCOF1-209ENST00000506630 DCPSQ96C86 337 aaKnown RBP16.46■□□□□ 0.23
TCOF1-209ENST00000506630 GBA2Q9HCG7 927 aaPredicted RBP16.46■□□□□ 0.23
TCOF1-209ENST00000506630 SAGE1Q9NXZ1 904 aa16.46■□□□□ 0.23
TCOF1-209ENST00000506630 MINPP1Q9UNW1 487 aa16.46■□□□□ 0.23
TCOF1-209ENST00000506630 UBTFL1P0CB47 393 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-209ENST00000506630 TBC1D10BQ4KMP7 808 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-209ENST00000506630 ZNF594Q96JF6 807 aaPredicted RBP16.45■□□□□ 0.22
TCOF1-209ENST00000506630 YTHDC1Q96MU7 727 aaKnown RBP16.45■□□□□ 0.22
TCOF1-209ENST00000506630 CASP8AP2Q9UKL3 1982 aa16.44■□□□□ 0.22
TCOF1-209ENST00000506630 PSMD14O00487 310 aa16.44■□□□□ 0.22
TCOF1-209ENST00000506630 ATP2B4P23634 1241 aa16.44■□□□□ 0.22
TCOF1-209ENST00000506630 RPS12P25398 132 aaKnown RBP16.44■□□□□ 0.22
TCOF1-209ENST00000506630 ZNF157P51786 506 aaPredicted RBP16.44■□□□□ 0.22
TCOF1-209ENST00000506630 RABL6Q3YEC7 729 aaPredicted RBP16.44■□□□□ 0.22
TCOF1-209ENST00000506630 ANKRD44Q8N8A2 993 aa16.44■□□□□ 0.22
TCOF1-209ENST00000506630 EGFRP00533 1210 aa16.43■□□□□ 0.22
TCOF1-209ENST00000506630 KIF23Q02241 960 aaPredicted RBP16.43■□□□□ 0.22
TCOF1-209ENST00000506630 RBM26Q5T8P6 1007 aaKnown RBP16.43■□□□□ 0.22
TCOF1-209ENST00000506630 INTS3Q68E01 1043 aaKnown RBP16.43■□□□□ 0.22
TCOF1-209ENST00000506630 FTSJ3Q8IY81 847 aaKnown RBP16.43■□□□□ 0.22
TCOF1-209ENST00000506630 ZC3H12CQ9C0D7 883 aaKnown RBP16.43■□□□□ 0.22
TCOF1-209ENST00000506630 FAM155AB1AL88 458 aaPredicted RBP16.42■□□□□ 0.22
TCOF1-209ENST00000506630 G3V3G9 751 aa16.42■□□□□ 0.22
TCOF1-209ENST00000506630 TRPA1O75762 1119 aa16.42■□□□□ 0.22
TCOF1-209ENST00000506630 CHRNDQ07001 517 aa16.42■□□□□ 0.22
TCOF1-209ENST00000506630 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
TCOF1-209ENST00000506630 MEIS3Q99687 375 aa16.42■□□□□ 0.22
TCOF1-209ENST00000506630 ANKRD2Q9GZV1 360 aa16.42■□□□□ 0.22
TCOF1-209ENST00000506630 CNNM1Q9NRU3 951 aa16.42■□□□□ 0.22
TCOF1-209ENST00000506630 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
TCOF1-209ENST00000506630 ZNF646O15015 1829 aaPredicted RBP16.41■□□□□ 0.22
TCOF1-209ENST00000506630 ECE2O60344 883 aa16.41■□□□□ 0.22
TCOF1-209ENST00000506630 KCNJ4P48050 445 aa16.41■□□□□ 0.22
TCOF1-209ENST00000506630 LDHAL6AQ6ZMR3 332 aa16.41■□□□□ 0.22
TCOF1-209ENST00000506630 SULF1Q8IWU6 871 aa16.41■□□□□ 0.22
TCOF1-209ENST00000506630 TMEM57Q8N5G2 664 aa16.41■□□□□ 0.22
TCOF1-209ENST00000506630 RNF186Q9NXI6 227 aa16.41■□□□□ 0.22
TCOF1-209ENST00000506630 LRRFIP2Q9Y608 721 aaKnown RBP16.41■□□□□ 0.22
TCOF1-209ENST00000506630 MED23Q9ULK4 1368 aa16.4■□□□□ 0.22
TCOF1-209ENST00000506630 ADM5C9JUS6 153 aa16.4■□□□□ 0.22
TCOF1-209ENST00000506630 HDAC5Q9UQL6 1122 aa16.4■□□□□ 0.22
TCOF1-209ENST00000506630 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
TCOF1-209ENST00000506630 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
TCOF1-209ENST00000506630 ZNF804BA4D1E1 1349 aa16.4■□□□□ 0.22
TCOF1-209ENST00000506630 PLIN1O60240 522 aa16.39■□□□□ 0.21
TCOF1-209ENST00000506630 TAF5LO75529 589 aa16.39■□□□□ 0.21
TCOF1-209ENST00000506630 GNAI3P08754 354 aa16.39■□□□□ 0.21
TCOF1-209ENST00000506630 SOX10P56693 466 aa16.39■□□□□ 0.21
TCOF1-209ENST00000506630 KIF4BQ2VIQ3 1234 aa16.39■□□□□ 0.21
TCOF1-209ENST00000506630 REM2Q8IYK8 340 aaPredicted RBP16.39■□□□□ 0.21
TCOF1-209ENST00000506630 DZIP1LQ8IYY4 767 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms