RNA–Protein interactions for RNA: ENST00000506441.1

RETREG1-203, Transcript of reticulophagy regulator 1, humanhuman

TSL 2

Gene RETREG1, Length 585 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-203ENST00000506441 HMGXB3Q12766 1538 aa12.2□□□□□ -0.46
RETREG1-203ENST00000506441 NCAPD3P42695 1498 aa12.2□□□□□ -0.46
RETREG1-203ENST00000506441 OIP5O43482 229 aa12.19□□□□□ -0.46
RETREG1-203ENST00000506441 XRCC5P13010 732 aaKnown RBP12.19□□□□□ -0.46
RETREG1-203ENST00000506441 KRT76Q01546 638 aa12.19□□□□□ -0.46
RETREG1-203ENST00000506441 TTC9Q92623 222 aa12.19□□□□□ -0.46
RETREG1-203ENST00000506441 MRRFQ96E11 262 aaKnown RBP12.19□□□□□ -0.46
RETREG1-203ENST00000506441 DZANK1Q9NVP4 752 aa12.19□□□□□ -0.46
RETREG1-203ENST00000506441 COL13A1Q5TAT6 717 aaPredicted RBP12.18□□□□□ -0.46
RETREG1-203ENST00000506441 CEP135Q66GS9 1140 aa12.18□□□□□ -0.46
RETREG1-203ENST00000506441 PSAPL1Q6NUJ1 521 aa12.18□□□□□ -0.46
RETREG1-203ENST00000506441 TMEM102Q8N9M5 508 aaPredicted RBP12.18□□□□□ -0.46
RETREG1-203ENST00000506441 BCO2Q9BYV7 579 aa12.18□□□□□ -0.46
RETREG1-203ENST00000506441 C12orf49Q9H741 205 aa12.18□□□□□ -0.46
RETREG1-203ENST00000506441 FAM8A1Q9UBU6 413 aa12.18□□□□□ -0.46
RETREG1-203ENST00000506441 VTI1BQ9UEU0 232 aa12.18□□□□□ -0.46
RETREG1-203ENST00000506441 BAZ1BQ9UIG0 1483 aaKnown RBP12.18□□□□□ -0.46
RETREG1-203ENST00000506441 PEG3Q9GZU2 1588 aa12.18□□□□□ -0.46
RETREG1-203ENST00000506441 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
RETREG1-203ENST00000506441 PDE2AO00408 941 aaPredicted RBP12.17□□□□□ -0.46
RETREG1-203ENST00000506441 TAGLNQ01995 201 aaKnown RBP12.17□□□□□ -0.46
RETREG1-203ENST00000506441 ZKSCAN3Q9BRR0 538 aa12.17□□□□□ -0.46
RETREG1-203ENST00000506441 SMG9Q9H0W8 520 aaKnown RBP12.17□□□□□ -0.46
RETREG1-203ENST00000506441 PTPRAP18433 802 aa12.16□□□□□ -0.46
RETREG1-203ENST00000506441 VAMP1P23763 118 aa12.16□□□□□ -0.46
RETREG1-203ENST00000506441 GSTT1P30711 240 aa12.16□□□□□ -0.46
RETREG1-203ENST00000506441 PERM1Q5SV97 790 aa12.16□□□□□ -0.46
RETREG1-203ENST00000506441 SETDB2Q96T68 719 aa12.16□□□□□ -0.46
RETREG1-203ENST00000506441 LILRB5O75023 590 aa12.15□□□□□ -0.46
RETREG1-203ENST00000506441 CELA2BP08218 269 aaPredicted RBP12.15□□□□□ -0.46
RETREG1-203ENST00000506441 IRS1P35568 1242 aa12.15□□□□□ -0.46
RETREG1-203ENST00000506441 PEAR1Q5VY43 1037 aaPredicted RBP12.15□□□□□ -0.46
RETREG1-203ENST00000506441 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
RETREG1-203ENST00000506441 BTBD6Q96KE9 485 aa12.15□□□□□ -0.46
RETREG1-203ENST00000506441 RASSF4Q9H2L5 321 aa12.15□□□□□ -0.46
RETREG1-203ENST00000506441 PIK3R2O00459 728 aa12.14□□□□□ -0.47
RETREG1-203ENST00000506441 CABP4P57796 275 aa12.14□□□□□ -0.47
RETREG1-203ENST00000506441 NXPE4Q6UWF7 544 aa12.14□□□□□ -0.47
RETREG1-203ENST00000506441 NXPE3Q969Y0 559 aa12.14□□□□□ -0.47
RETREG1-203ENST00000506441 MDFIQ99750 246 aa12.14□□□□□ -0.47
RETREG1-203ENST00000506441 MUC3BQ9H195 1237 aa12.14□□□□□ -0.47
RETREG1-203ENST00000506441 JPH1Q9HDC5 661 aaPredicted RBP12.14□□□□□ -0.47
RETREG1-203ENST00000506441 LATS2Q9NRM7 1088 aa12.14□□□□□ -0.47
RETREG1-203ENST00000506441 EIF4EBP3O60516 100 aaPredicted RBP12.13□□□□□ -0.47
RETREG1-203ENST00000506441 GRM2Q14416 872 aa12.13□□□□□ -0.47
RETREG1-203ENST00000506441 PRPF40BQ6NWY9 871 aaKnown RBP12.13□□□□□ -0.47
RETREG1-203ENST00000506441 DTHD1Q6ZMT9 781 aa12.13□□□□□ -0.47
RETREG1-203ENST00000506441 CHSY3Q70JA7 882 aa12.13□□□□□ -0.47
RETREG1-203ENST00000506441 CCNJLQ8IV13 435 aa12.13□□□□□ -0.47
RETREG1-203ENST00000506441 ASAP3Q8TDY4 903 aa12.13□□□□□ -0.47
RETREG1-203ENST00000506441 BHLHE41Q9C0J9 482 aaPredicted RBP12.13□□□□□ -0.47
RETREG1-203ENST00000506441 PTPN12Q05209 780 aaKnown RBP12.12□□□□□ -0.47
RETREG1-203ENST00000506441 PI16Q6UXB8 463 aa12.12□□□□□ -0.47
RETREG1-203ENST00000506441 SVOPQ8N4V2 548 aa12.12□□□□□ -0.47
RETREG1-203ENST00000506441 NUDT8Q8WV74 236 aa12.12□□□□□ -0.47
RETREG1-203ENST00000506441 LPIN3Q9BQK8 851 aa12.12□□□□□ -0.47
RETREG1-203ENST00000506441 MROH2BQ7Z745 1585 aa12.11□□□□□ -0.47
RETREG1-203ENST00000506441 TMEM238LA0A1B0GVL6 79 aa12.11□□□□□ -0.47
RETREG1-203ENST00000506441 ATP11AP98196 1134 aa12.11□□□□□ -0.47
RETREG1-203ENST00000506441 BSNDQ8WZ55 320 aa12.11□□□□□ -0.47
RETREG1-203ENST00000506441 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
RETREG1-203ENST00000506441 FAM117BQ6P1L5 589 aa12.1□□□□□ -0.47
RETREG1-203ENST00000506441 LYPD4Q6UWN0 246 aa12.1□□□□□ -0.47
RETREG1-203ENST00000506441 DDX54Q8TDD1 881 aaKnown RBP12.1□□□□□ -0.47
RETREG1-203ENST00000506441 OSBPL7Q9BZF2 842 aa12.1□□□□□ -0.47
RETREG1-203ENST00000506441 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.1□□□□□ -0.47
RETREG1-203ENST00000506441 A0A096LPE4 126 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 M0R082 166 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 NFKBIEO00221 500 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 CDC27P30260 824 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 FCGRTP55899 365 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 MRPL58Q14197 206 aaKnown RBP12.09□□□□□ -0.47
RETREG1-203ENST00000506441 GDF6Q6KF10 455 aaPredicted RBP12.09□□□□□ -0.47
RETREG1-203ENST00000506441 ZNF417Q8TAU3 575 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 ZNF428Q96B54 188 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 FAM161BQ96MY7 647 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 ZNF587Q96SQ5 575 aaPredicted RBP12.09□□□□□ -0.47
RETREG1-203ENST00000506441 TCF12Q99081 682 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 POP1Q99575 1024 aaKnown RBP12.09□□□□□ -0.47
RETREG1-203ENST00000506441 RRAGCQ9HB90 399 aa12.09□□□□□ -0.47
RETREG1-203ENST00000506441 TMEM87AQ8NBN3 555 aa12.08□□□□□ -0.48
RETREG1-203ENST00000506441 CRELD1Q96HD1 420 aa12.08□□□□□ -0.48
RETREG1-203ENST00000506441 PRDM6Q9NQX0 595 aa12.08□□□□□ -0.48
RETREG1-203ENST00000506441 NAGPAQ9UK23 515 aa12.08□□□□□ -0.48
RETREG1-203ENST00000506441 PPM1HQ9ULR3 514 aa12.08□□□□□ -0.48
RETREG1-203ENST00000506441 WIPF1O43516 503 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 TRPA1O75762 1119 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 USP17L7P0C7H9 530 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 ACPPP15309 386 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 TSNAXIP1Q2TAA8 658 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 RPS26P11Q5JNZ5 115 aaPredicted RBP12.07□□□□□ -0.48
RETREG1-203ENST00000506441 C1orf229Q6ZS94 237 aaPredicted RBP12.07□□□□□ -0.48
RETREG1-203ENST00000506441 DCAF11Q8TEB1 546 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 ADAM19Q9H013 955 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 AKAP2Q9Y2D5 859 aa12.07□□□□□ -0.48
RETREG1-203ENST00000506441 UNCXA6NJT0 531 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 ALBP02768 609 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 ARL4DP49703 201 aa12.06□□□□□ -0.48
RETREG1-203ENST00000506441 INSM1Q01101 510 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms