RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 FAM177BA6PVY3 158 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 SEMA3EO15041 775 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 HMMRO75330 724 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 TNNI3KQ59H18 835 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 TMED8Q6PL24 325 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 FPGT-TNNI3KV9GXZ4 949 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 YDJCA8MPS7 323 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 GRIN3BO60391 1043 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 RHPN1Q8TCX5 695 aa10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 ZBED3Q96IU2 234 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 L3MBTL3Q96JM7 780 aaPredicted RBP10.29□□□□□ -0.76
CDC42SE2-208ENST00000505065 KIF1BPQ96EK5 621 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 FAM84BQ96KN1 310 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 KLRK1P26718 216 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 TFCP2Q12800 502 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 RTL5Q5HYW3 569 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 LDHAL6AQ6ZMR3 332 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 MYH1P12882 1939 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 C21orf2O43822 256 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 IARSP41252 1262 aaKnown RBP10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 TXNRD3Q86VQ6 643 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 MPNDQ8N594 471 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 EAF2Q96CJ1 260 aaPredicted RBP10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 MRIQ9BWK5 157 aa10.28□□□□□ -0.76
CDC42SE2-208ENST00000505065 GTF2E1P29083 439 aaPredicted RBP10.27□□□□□ -0.76
CDC42SE2-208ENST00000505065 PI4K2BQ8TCG2 481 aa10.27□□□□□ -0.76
CDC42SE2-208ENST00000505065 COA1Q9GZY4 146 aa10.27□□□□□ -0.76
CDC42SE2-208ENST00000505065 DBNLQ9UJU6 430 aaKnown RBP10.27□□□□□ -0.77
CDC42SE2-208ENST00000505065 VIL1P09327 827 aaKnown RBP10.27□□□□□ -0.77
CDC42SE2-208ENST00000505065 GGA1Q9UJY5 639 aa10.27□□□□□ -0.77
CDC42SE2-208ENST00000505065 AKAP2Q9Y2D5 859 aa10.27□□□□□ -0.77
CDC42SE2-208ENST00000505065 TTC41PQ6P2S7 1318 aa10.27□□□□□ -0.77
CDC42SE2-208ENST00000505065 LMNB1P20700 586 aa10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 CENPQQ7L2Z9 268 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 MTMR14Q8NCE2 650 aa10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 ZNF622Q969S3 477 aaKnown RBP eCLIP10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 SUGT1Q9Y2Z0 365 aa10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 PDE4AP27815 886 aa10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 RWDD1Q9H446 243 aaPredicted RBP10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 SNRKQ9NRH2 765 aa10.26□□□□□ -0.77
CDC42SE2-208ENST00000505065 UTRNP46939 3433 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 ATP5JP18859 108 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 ZNF280AP59817 542 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 DPP8Q6V1X1 898 aaPredicted RBP10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 PODNQ7Z5L7 613 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 EYA3Q99504 573 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 MPHOSPH8Q99549 860 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 MYH8P13535 1937 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 A0A1B0GUL7 405 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 RASSF7Q02833 373 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 DACT2Q5SW24 774 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 LRRCC1Q9C099 1032 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 PARP14Q460N5 1801 aa10.25□□□□□ -0.77
CDC42SE2-208ENST00000505065 PPP4R2Q9NY27 417 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 PPP1R1BQ9UD71 204 aaPredicted RBP10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 POTECB2RU33 542 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 XAGE2Q96GT9 111 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 TLR7Q9NYK1 1049 aaKnown RBP10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 PGAP2Q9UHJ9 254 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 ATP2B3Q16720 1220 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 CD209Q9NNX6 404 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 DOCK1Q14185 1865 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 ADORA1P30542 326 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 ZNF384Q8TF68 577 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 EXOC6BQ9Y2D4 811 aa10.24□□□□□ -0.77
CDC42SE2-208ENST00000505065 LOC285556D6RIA3 1793 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 POLR2AP24928 1970 aaKnown RBP10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 STRIP1Q5VSL9 837 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 TAF5LO75529 589 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 SURF6O75683 361 aaKnown RBP10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 METTL24Q5JXM2 366 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 CHD1LQ86WJ1 897 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 FAM163AQ96GL9 167 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 HAUS7Q99871 368 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 CNNM1Q9NRU3 951 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 ZNRF3Q9ULT6 936 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 SRCAPQ6ZRS2 3230 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 ZNF541Q9H0D2 1346 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 UFL1O94874 794 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 SLC5A1P13866 664 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 G3BP1Q13283 466 aaKnown RBP eCLIP10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 CCDC102BQ68D86 513 aa10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 CCDC85AQ96PX6 553 aaPredicted RBP10.23□□□□□ -0.77
CDC42SE2-208ENST00000505065 GAKO14976 1311 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 PTPRFP10586 1907 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 CEP126Q9P2H0 1117 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 ECE2O60344 883 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 RPS12P25398 132 aaKnown RBP10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 MCAMP43121 646 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 BCS1LQ9Y276 419 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 TCRBV5S4A2TA0A5A2 114 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 HDLBPQ00341 1268 aaKnown RBP10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 AOC3Q16853 763 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 WASHC4Q2M389 1173 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 MYO3BQ8WXR4 1341 aa10.22□□□□□ -0.77
CDC42SE2-208ENST00000505065 DPF2Q92785 391 aa10.21□□□□□ -0.77
CDC42SE2-208ENST00000505065 GPC2Q8N158 579 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms