RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
CDH9-202ENST00000505020 NAT2P11245 290 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 TSGA10IPQ3SY00 556 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 RC3H1Q5TC82 1133 aaKnown RBP8.62□□□□□ -1.03
CDH9-202ENST00000505020 TSHZ3Q63HK5 1081 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 LMBRD2Q68DH5 695 aaPredicted RBP8.62□□□□□ -1.03
CDH9-202ENST00000505020 IFNL2Q8IZJ0 200 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 PHTF2Q8N3S3 785 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 ENAHQ8N8S7 591 aaPredicted RBP8.62□□□□□ -1.03
CDH9-202ENST00000505020 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 JPH3Q8WXH2 748 aaPredicted RBP8.62□□□□□ -1.03
CDH9-202ENST00000505020 TBC1D20Q96BZ9 403 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 DMRTB1Q96MA1 342 aa8.62□□□□□ -1.03
CDH9-202ENST00000505020 V9GY48 417 aaPredicted RBP8.62□□□□□ -1.03
CDH9-202ENST00000505020 PNMA6FA0A0J9YX94 578 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 RHOBTB3O94955 611 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 HOXC13P31276 330 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 ZNF131P52739 623 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 WDR45BQ5MNZ6 344 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 IQCEQ6IPM2 695 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 MORC1Q86VD1 984 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 ZNF354CQ86Y25 554 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 JARID2Q92833 1246 aaPredicted RBP8.61□□□□□ -1.03
CDH9-202ENST00000505020 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
CDH9-202ENST00000505020 SCLT1Q96NL6 688 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 NOB1Q9ULX3 412 aaKnown RBP8.61□□□□□ -1.03
CDH9-202ENST00000505020 SMC3Q9UQE7 1217 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 IPPQ9Y573 584 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 A6NCN8 305 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 FOSL1P15407 271 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 NAT1P18440 290 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 TNFAIP3P21580 790 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 OAS2P29728 719 aaKnown RBP8.61□□□□□ -1.03
CDH9-202ENST00000505020 MLC1Q15049 377 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 DNAJC21Q5F1R6 531 aaKnown RBP8.61□□□□□ -1.03
CDH9-202ENST00000505020 HERPUD2Q9BSE4 406 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 CENPOQ9BU64 300 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 AK5Q9Y6K8 562 aa8.61□□□□□ -1.03
CDH9-202ENST00000505020 C6orf229H3BNL8 230 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 PRPF3O43395 683 aaKnown RBP8.6□□□□□ -1.03
CDH9-202ENST00000505020 SNX2O60749 519 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 NBNO60934 754 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 PTCD1O75127 700 aaKnown RBP8.6□□□□□ -1.03
CDH9-202ENST00000505020 MAP2K1Q02750 393 aaPredicted RBP8.6□□□□□ -1.03
CDH9-202ENST00000505020 SNX32Q86XE0 403 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 DGKHQ86XP1 1220 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 CERKQ8TCT0 537 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 RASGRP4Q8TDF6 673 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 EMID1Q96A84 441 aaPredicted RBP8.6□□□□□ -1.03
CDH9-202ENST00000505020 CFAP53Q96M91 514 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 CITED4Q96RK1 184 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 NIF3L1Q9GZT8 377 aa8.6□□□□□ -1.03
CDH9-202ENST00000505020 RASSF10A6NK89 507 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 HNRNPCP07910 306 aaKnown RBP eCLIP8.59□□□□□ -1.03
CDH9-202ENST00000505020 NCAM1P13591 858 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 SERPINB3P29508 390 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 HTR3AP46098 478 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 MMRN1Q13201 1228 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 CCDC102BQ68D86 513 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 ALG1LQ6GMV1 187 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 TYW1BQ6NUM6 668 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 LVRNQ6Q4G3 990 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 RPGRQ92834 1020 aaKnown RBP8.59□□□□□ -1.03
CDH9-202ENST00000505020 FAM163AQ96GL9 167 aaPredicted RBP8.59□□□□□ -1.03
CDH9-202ENST00000505020 NELL2Q99435 816 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.59□□□□□ -1.03
CDH9-202ENST00000505020 USP25Q9UHP3 1055 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 NASPP49321 788 aaPredicted RBP8.59□□□□□ -1.03
CDH9-202ENST00000505020 NEK2P51955 445 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 USP46P62068 366 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 PURAQ00577 322 aaKnown RBP8.59□□□□□ -1.03
CDH9-202ENST00000505020 TRAF7Q6Q0C0 670 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 MAATS1Q7Z4T9 603 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 CATIPQ7Z7H3 387 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 KIAA0825Q8IV33 1275 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 OR8H2Q8N162 312 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 SEC16BQ96JE7 1060 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 EYA1Q99502 592 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 ASPSCR1Q9BZE9 553 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 NBPF3Q9H094 633 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 CDH19Q9H159 772 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 SH3GLB2Q9NR46 395 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 MAFFQ9ULX9 164 aa8.59□□□□□ -1.03
CDH9-202ENST00000505020 KLRG2A4D1S0 409 aaPredicted RBP8.58□□□□□ -1.04
CDH9-202ENST00000505020 NBPF7P0C2Y1 421 aaPredicted RBP8.58□□□□□ -1.04
CDH9-202ENST00000505020 CASQ1P31415 396 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 EIF5P55010 431 aaKnown RBP8.58□□□□□ -1.04
CDH9-202ENST00000505020 E2F5Q15329 346 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 JAKMIP3Q5VZ66 844 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 THNSL2Q86YJ6 484 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 TCEAL8Q8IYN2 117 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 CHAC2Q8WUX2 184 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 ATXN2LQ8WWM7 1075 aaKnown RBP8.58□□□□□ -1.04
CDH9-202ENST00000505020 ATG3Q9NT62 314 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 ZRANB1Q9UGI0 708 aa8.58□□□□□ -1.04
CDH9-202ENST00000505020 FZD6O60353 706 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 KATNA1O75449 491 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 WEE1P30291 646 aa8.57□□□□□ -1.04
CDH9-202ENST00000505020 ADD2P35612 726 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms