RNA–Protein interactions for RNA: ENST00000504212.5

SPOP-207, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 4

Gene SPOP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-207ENST00000504212 TBC1D8O95759 1140 aa17.37■□□□□ 0.37
SPOP-207ENST00000504212 CT47B1P0C2W7 299 aaPredicted RBP17.37■□□□□ 0.37
SPOP-207ENST00000504212 USP17L8P0C7I0 530 aa17.36■□□□□ 0.37
SPOP-207ENST00000504212 ZNF280AP59817 542 aaPredicted RBP17.36■□□□□ 0.37
SPOP-207ENST00000504212 SSH1Q8WYL5 1049 aa17.36■□□□□ 0.37
SPOP-207ENST00000504212 MYOZ2Q9NPC6 264 aa17.36■□□□□ 0.37
SPOP-207ENST00000504212 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
SPOP-207ENST00000504212 UBE2Q2LH0YL09 131 aa17.35■□□□□ 0.37
SPOP-207ENST00000504212 NEXNQ0ZGT2 675 aa17.35■□□□□ 0.37
SPOP-207ENST00000504212 TRIM28Q13263 835 aaKnown RBP17.35■□□□□ 0.37
SPOP-207ENST00000504212 MRPL50Q8N5N7 158 aaKnown RBP17.35■□□□□ 0.37
SPOP-207ENST00000504212 ZNF296Q8WUU4 475 aaPredicted RBP17.35■□□□□ 0.37
SPOP-207ENST00000504212 SEC31BQ9NQW1 1179 aa17.35■□□□□ 0.37
SPOP-207ENST00000504212 SMC4Q9NTJ3 1288 aa17.35■□□□□ 0.37
SPOP-207ENST00000504212 LAMB2P55268 1798 aa17.35■□□□□ 0.37
SPOP-207ENST00000504212 ALDH1L2Q3SY69 923 aa17.34■□□□□ 0.37
SPOP-207ENST00000504212 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
SPOP-207ENST00000504212 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
SPOP-207ENST00000504212 ZBTB38Q8NAP3 1195 aaPredicted RBP17.34■□□□□ 0.37
SPOP-207ENST00000504212 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
SPOP-207ENST00000504212 SCAF8Q9UPN6 1271 aaKnown RBP17.34■□□□□ 0.37
SPOP-207ENST00000504212 PITPNM2Q9BZ72 1349 aa17.33■□□□□ 0.36
SPOP-207ENST00000504212 NF2P35240 595 aa17.33■□□□□ 0.36
SPOP-207ENST00000504212 PRAMEF18Q5VWM3 479 aa17.33■□□□□ 0.36
SPOP-207ENST00000504212 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.36
SPOP-207ENST00000504212 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.36
SPOP-207ENST00000504212 CWC25Q9NXE8 425 aaPredicted RBP17.33■□□□□ 0.36
SPOP-207ENST00000504212 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
SPOP-207ENST00000504212 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
SPOP-207ENST00000504212 F6X3S4 739 aa17.32■□□□□ 0.36
SPOP-207ENST00000504212 MKRN3Q13064 507 aaKnown RBP17.32■□□□□ 0.36
SPOP-207ENST00000504212 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
SPOP-207ENST00000504212 PODNQ7Z5L7 613 aa17.32■□□□□ 0.36
SPOP-207ENST00000504212 FBXW7Q969H0 707 aa17.32■□□□□ 0.36
SPOP-207ENST00000504212 LRRC37AA6NMS7 1700 aa17.32■□□□□ 0.36
SPOP-207ENST00000504212 TAF1P21675 1872 aa17.31■□□□□ 0.36
SPOP-207ENST00000504212 XDHP47989 1333 aa17.31■□□□□ 0.36
SPOP-207ENST00000504212 GPR25O00155 361 aa17.31■□□□□ 0.36
SPOP-207ENST00000504212 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
SPOP-207ENST00000504212 ANKRD18AQ8IVF6 992 aa17.31■□□□□ 0.36
SPOP-207ENST00000504212 OGFOD1Q8N543 542 aa17.31■□□□□ 0.36
SPOP-207ENST00000504212 NEURL1BA8MQ27 555 aa17.3■□□□□ 0.36
SPOP-207ENST00000504212 ATP2B4P23634 1241 aa17.3■□□□□ 0.36
SPOP-207ENST00000504212 TM4SF4P48230 202 aa17.3■□□□□ 0.36
SPOP-207ENST00000504212 SREBF2Q12772 1141 aa17.3■□□□□ 0.36
SPOP-207ENST00000504212 CWF19L2Q2TBE0 894 aaKnown RBP17.3■□□□□ 0.36
SPOP-207ENST00000504212 FBXO46Q6PJ61 603 aaPredicted RBP17.3■□□□□ 0.36
SPOP-207ENST00000504212 PTPRCP08575 1304 aa17.29■□□□□ 0.36
SPOP-207ENST00000504212 PDE8AO60658 829 aa17.29■□□□□ 0.36
SPOP-207ENST00000504212 PCCAP05165 728 aaPredicted RBP17.29■□□□□ 0.36
SPOP-207ENST00000504212 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
SPOP-207ENST00000504212 NBPF9Q3BBW0 867 aa17.29■□□□□ 0.36
SPOP-207ENST00000504212 LINS1Q8NG48 757 aa17.29■□□□□ 0.36
SPOP-207ENST00000504212 JARID2Q92833 1246 aaPredicted RBP17.29■□□□□ 0.36
SPOP-207ENST00000504212 GCC1Q96CN9 775 aa17.29■□□□□ 0.36
SPOP-207ENST00000504212 GMLQ99445 158 aa17.29■□□□□ 0.36
SPOP-207ENST00000504212 FKTNO75072 461 aa17.28■□□□□ 0.36
SPOP-207ENST00000504212 PRKG1Q13976 671 aa17.28■□□□□ 0.36
SPOP-207ENST00000504212 SLC4A10Q6U841 1118 aa17.28■□□□□ 0.36
SPOP-207ENST00000504212 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
SPOP-207ENST00000504212 BEND3Q5T5X7 828 aa17.27■□□□□ 0.36
SPOP-207ENST00000504212 ARMC9Q7Z3E5 817 aa17.27■□□□□ 0.36
SPOP-207ENST00000504212 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.27■□□□□ 0.36
SPOP-207ENST00000504212 TNRC18O15417 2968 aaPredicted RBP17.26■□□□□ 0.35
SPOP-207ENST00000504212 AKAP11Q9UKA4 1901 aa17.26■□□□□ 0.35
SPOP-207ENST00000504212 GCKRQ14397 625 aa17.26■□□□□ 0.35
SPOP-207ENST00000504212 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
SPOP-207ENST00000504212 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
SPOP-207ENST00000504212 ZNF609O15014 1411 aa17.26■□□□□ 0.35
SPOP-207ENST00000504212 PDE4DIPQ5VU43 2346 aa17.26■□□□□ 0.35
SPOP-207ENST00000504212 COL4A1P02462 1669 aa17.26■□□□□ 0.35
SPOP-207ENST00000504212 PAPPA2Q9BXP8 1791 aa17.25■□□□□ 0.35
SPOP-207ENST00000504212 KIF16BQ96L93 1317 aa17.25■□□□□ 0.35
SPOP-207ENST00000504212 WNT10BO00744 389 aa17.25■□□□□ 0.35
SPOP-207ENST00000504212 UBE3BQ7Z3V4 1068 aa17.25■□□□□ 0.35
SPOP-207ENST00000504212 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
SPOP-207ENST00000504212 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
SPOP-207ENST00000504212 SRCIN1Q9C0H9 1055 aa17.25■□□□□ 0.35
SPOP-207ENST00000504212 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
SPOP-207ENST00000504212 POLR2AP24928 1970 aaKnown RBP17.25■□□□□ 0.35
SPOP-207ENST00000504212 MYO3BQ8WXR4 1341 aa17.24■□□□□ 0.35
SPOP-207ENST00000504212 ALDH1L1O75891 902 aa17.24■□□□□ 0.35
SPOP-207ENST00000504212 ALDH1A1P00352 501 aa17.24■□□□□ 0.35
SPOP-207ENST00000504212 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
SPOP-207ENST00000504212 H7C1W4 665 aa17.23■□□□□ 0.35
SPOP-207ENST00000504212 BCAR3O75815 825 aa17.23■□□□□ 0.35
SPOP-207ENST00000504212 SASH1O94885 1247 aa17.23■□□□□ 0.35
SPOP-207ENST00000504212 DACT2Q5SW24 774 aa17.23■□□□□ 0.35
SPOP-207ENST00000504212 STRIP1Q5VSL9 837 aa17.23■□□□□ 0.35
SPOP-207ENST00000504212 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
SPOP-207ENST00000504212 ANGEL1Q9UNK9 670 aaKnown RBP17.23■□□□□ 0.35
SPOP-207ENST00000504212 APOBEC3FQ8IUX4 373 aaKnown RBP17.22■□□□□ 0.35
SPOP-207ENST00000504212 SLC10A4Q96EP9 437 aa17.22■□□□□ 0.35
SPOP-207ENST00000504212 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
SPOP-207ENST00000504212 R3HDMLQ9H3Y0 253 aa17.22■□□□□ 0.35
SPOP-207ENST00000504212 MINPP1Q9UNW1 487 aa17.22■□□□□ 0.35
SPOP-207ENST00000504212 TRIM17Q9Y577 477 aa17.22■□□□□ 0.35
SPOP-207ENST00000504212 MED23Q9ULK4 1368 aa17.21■□□□□ 0.35
SPOP-207ENST00000504212 WTIPA6NIX2 430 aaPredicted RBP17.21■□□□□ 0.35
SPOP-207ENST00000504212 MMP14P50281 582 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms