RNA–Protein interactions for RNA: ENST00000503547.1

NR1I3-218, Transcript of nuclear receptor subfamily 1 group I member 3, human

TSL 1 (best)

Gene NR1I3, Length 535 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1I3-218	ENST00000503547	REM2	Q8IYK8	340 aa	Predicted RBP	11.45	□□□□□ -0.58
NR1I3-218	ENST00000503547	OGFOD1	Q8N543	542 aa		11.45	□□□□□ -0.58
NR1I3-218	ENST00000503547	CHMP4A	Q9BY43	222 aa		11.45	□□□□□ -0.58
NR1I3-218	ENST00000503547	HDAC9	Q9UKV0	1011 aa		11.45	□□□□□ -0.58
NR1I3-218	ENST00000503547	MAP3K2	Q9Y2U5	619 aa		11.45	□□□□□ -0.58
NR1I3-218	ENST00000503547		A0A1B0GUL6	1792 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	MED23	Q9ULK4	1368 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	UBE2Q2L	H0YL09	131 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	NF2	P35240	595 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	NEXN	Q0ZGT2	675 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	PRAMEF18	Q5VWM3	479 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	MOB2	Q70IA6	237 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	C8orf58	Q8NAV2	365 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	STK31	Q9BXU1	1019 aa		11.44	□□□□□ -0.58
NR1I3-218	ENST00000503547	PI4KAP2	A4QPH2	592 aa		11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	MKRN3	Q13064	507 aa	Known RBP	11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	NBPF9	Q3BBW0	867 aa		11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	NCBP3	Q53F19	620 aa	Known RBP	11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	PI4KAP1	Q8N8J0	262 aa		11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	GML	Q99445	158 aa		11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	MXD3	Q9BW11	206 aa		11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	GREM2	Q9H772	168 aa		11.43	□□□□□ -0.58
NR1I3-218	ENST00000503547	MYO3B	Q8WXR4	1341 aa		11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	WTIP	A6NIX2	430 aa	Predicted RBP	11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	SASH1	O94885	1247 aa		11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	IGHMBP2	P38935	993 aa	Known RBP	11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	CCT4	P50991	539 aa	Known RBP	11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	CWF19L2	Q2TBE0	894 aa	Known RBP	11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	KSR2	Q6VAB6	950 aa		11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	BSDC1	Q9NW68	430 aa	Predicted RBP	11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	MINPP1	Q9UNW1	487 aa		11.42	□□□□□ -0.58
NR1I3-218	ENST00000503547	TBC1D8	O95759	1140 aa		11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	KCNJ4	P48050	445 aa		11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	PRKG1	Q13976	671 aa		11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	DACT2	Q5SW24	774 aa		11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	UBE3B	Q7Z3V4	1068 aa		11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	TSPYL6	Q8N831	410 aa		11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	TTLL11	Q8NHH1	800 aa		11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	TSR2	Q969E8	191 aa	Known RBP	11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.41	□□□□□ -0.58
NR1I3-218	ENST00000503547	NEURL1B	A8MQ27	555 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	WNT10B	O00744	389 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	IGKV5-2	P06315	115 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	PKN2	Q16513	984 aa	Known RBP	11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	STRIP1	Q5VSL9	837 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	APOBEC3F	Q8IUX4	373 aa	Known RBP	11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	KIAA0825	Q8IV33	1275 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	MPHOSPH8	Q99549	860 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	COA1	Q9GZY4	146 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	HPS5	Q9UPZ3	1129 aa		11.4	□□□□□ -0.58
NR1I3-218	ENST00000503547	ZNF804B	A4D1E1	1349 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	LAMB1	P07942	1786 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	KIAA0100	Q14667	2235 aa	Known RBP	11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	CENPF	P49454	3210 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	SREBF2	Q12772	1141 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	TTLL5	Q6EMB2	1281 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	ARMC9	Q7Z3E5	817 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	CNKSR2	Q8WXI2	1034 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	ANKRD2	Q9GZV1	360 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	LEMD3	Q9Y2U8	911 aa		11.39	□□□□□ -0.59
NR1I3-218	ENST00000503547	OTOF	Q9HC10	1997 aa		11.38	□□□□□ -0.59
NR1I3-218	ENST00000503547	ITGA6	P23229	1130 aa		11.38	□□□□□ -0.59
NR1I3-218	ENST00000503547	KLRK1	P26718	216 aa		11.38	□□□□□ -0.59
NR1I3-218	ENST00000503547	GTF2I	P78347	998 aa		11.38	□□□□□ -0.59
NR1I3-218	ENST00000503547	TWISTNB	Q3B726	338 aa	Predicted RBP	11.38	□□□□□ -0.59
NR1I3-218	ENST00000503547	TXNRD3	Q86VQ6	643 aa		11.38	□□□□□ -0.59
NR1I3-218	ENST00000503547	ANGEL1	Q9UNK9	670 aa	Known RBP	11.38	□□□□□ -0.59
NR1I3-218	ENST00000503547	GPR25	O00155	361 aa		11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	SLC4A2	P04920	1241 aa		11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	TM4SF4	P48230	202 aa		11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	PTPN12	Q05209	780 aa	Known RBP	11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	FKBP5	Q13451	457 aa	Predicted RBP	11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	G2E3	Q7L622	706 aa		11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	MYH16	Q9H6N6	1097 aa		11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	CHMP3	Q9Y3E7	222 aa		11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	COL1A1	P02452	1464 aa	Predicted RBP	11.37	□□□□□ -0.59
NR1I3-218	ENST00000503547	ARAP2	Q8WZ64	1704 aa		11.36	□□□□□ -0.59
NR1I3-218	ENST00000503547		H7C1W4	665 aa		11.36	□□□□□ -0.59
NR1I3-218	ENST00000503547	FKTN	O75072	461 aa		11.36	□□□□□ -0.59
NR1I3-218	ENST00000503547	MMP14	P50281	582 aa		11.36	□□□□□ -0.59
NR1I3-218	ENST00000503547	GCKR	Q14397	625 aa		11.36	□□□□□ -0.59
NR1I3-218	ENST00000503547	DLGAP5	Q15398	846 aa		11.36	□□□□□ -0.59
NR1I3-218	ENST00000503547	PRPF38B	Q5VTL8	546 aa	Known RBP	11.36	□□□□□ -0.59
NR1I3-218	ENST00000503547	HTT	P42858	3142 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	ANKRD18B	A2A2Z9	1011 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547		F8W031	263 aa	Predicted RBP	11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	MYO1B	O43795	1136 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	CHRND	Q07001	517 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	FLII	Q13045	1269 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	SPRYD7	Q5W111	196 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	PCDH10	Q9P2E7	1040 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	FZD1	Q9UP38	647 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	AK9	Q5TCS8	1911 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	MYH13	Q9UKX3	1938 aa		11.35	□□□□□ -0.59
NR1I3-218	ENST00000503547	RBBP6	Q7Z6E9	1792 aa	Known RBP	11.34	□□□□□ -0.59
NR1I3-218	ENST00000503547	PPP1R12B	O60237	982 aa	Predicted RBP	11.34	□□□□□ -0.59
NR1I3-218	ENST00000503547	TAF5L	O75529	589 aa		11.34	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms