RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PDE3AQ14432 1141 aa22.72■■□□□ 1.23
PDLIM7-209ENST00000503346 MVPQ14764 893 aaKnown RBP22.72■■□□□ 1.23
PDLIM7-209ENST00000503346 ATG9AQ7Z3C6 839 aa22.72■■□□□ 1.23
PDLIM7-209ENST00000503346 PDE8BO95263 885 aa22.71■■□□□ 1.23
PDLIM7-209ENST00000503346 VIL1P09327 827 aaKnown RBP22.71■■□□□ 1.23
PDLIM7-209ENST00000503346 LMOD1P29536 600 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-209ENST00000503346 EPHX2P34913 555 aa22.71■■□□□ 1.23
PDLIM7-209ENST00000503346 GMPSP49915 693 aaPredicted RBP22.71■■□□□ 1.23
PDLIM7-209ENST00000503346 GPRC5DQ9NZD1 345 aa22.71■■□□□ 1.23
PDLIM7-209ENST00000503346 PA2G4Q9UQ80 394 aaKnown RBP22.7■■□□□ 1.22
PDLIM7-209ENST00000503346 A0A1B0GUL6 1792 aa22.7■■□□□ 1.22
PDLIM7-209ENST00000503346 SCN4AP35499 1836 aa22.7■■□□□ 1.22
PDLIM7-209ENST00000503346 PNMA6EA0A0J9YXQ4 647 aa22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 RPS12P25398 132 aaKnown RBP22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 IL15P40933 162 aaPredicted RBP22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 EPS15P42566 896 aa22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 DPF2Q92785 391 aa22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 SIL1Q9H173 461 aa22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 CD209Q9NNX6 404 aa22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 DDX19BQ9UMR2 479 aa22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 COG6Q9Y2V7 657 aa22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 ZBTB12Q9Y330 459 aaPredicted RBP22.69■■□□□ 1.22
PDLIM7-209ENST00000503346 ZNF609O15014 1411 aa22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 USP17L3A6NCW0 530 aa22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 USP17L4A6NCW7 530 aa22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 FSTL1Q12841 308 aa22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 USP17L1Q7RTZ2 530 aa22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 ZNF804AQ7Z570 1209 aa22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 PNMA8AQ86V59 439 aaPredicted RBP22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 C1orf115Q9H7X2 142 aa22.68■■□□□ 1.22
PDLIM7-209ENST00000503346 FGFR2P21802 821 aa22.67■■□□□ 1.22
PDLIM7-209ENST00000503346 ATP8B2P98198 1209 aa22.67■■□□□ 1.22
PDLIM7-209ENST00000503346 POLA2Q14181 598 aa22.67■■□□□ 1.22
PDLIM7-209ENST00000503346 PUM3Q15397 648 aaKnown RBP22.67■■□□□ 1.22
PDLIM7-209ENST00000503346 C20orf194Q5TEA3 1177 aa22.67■■□□□ 1.22
PDLIM7-209ENST00000503346 RSBN1LQ6PCB5 846 aaPredicted RBP22.67■■□□□ 1.22
PDLIM7-209ENST00000503346 SMC1BQ8NDV3 1235 aa22.67■■□□□ 1.22
PDLIM7-209ENST00000503346 IL1R1P14778 569 aa22.66■■□□□ 1.22
PDLIM7-209ENST00000503346 STRIP1Q5VSL9 837 aa22.66■■□□□ 1.22
PDLIM7-209ENST00000503346 LDHDQ86WU2 507 aa22.66■■□□□ 1.22
PDLIM7-209ENST00000503346 SSH3Q8TE77 659 aa22.66■■□□□ 1.22
PDLIM7-209ENST00000503346 ADARB2Q9NS39 739 aaKnown RBP22.66■■□□□ 1.22
PDLIM7-209ENST00000503346 SCN9AQ15858 1988 aa22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 POTEIP0CG38 1075 aa22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 POTEJP0CG39 1038 aa22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 DACT2Q5SW24 774 aa22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 USP50Q70EL3 339 aaPredicted RBP22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 AGBL3Q8NEM8 1001 aa22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 FAM84BQ96KN1 310 aaPredicted RBP22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 CHMP4BQ9H444 224 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 ZBTB40Q9NUA8 1239 aa22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 CEP126Q9P2H0 1117 aa22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 CNOT7Q9UIV1 285 aaKnown RBP22.65■■□□□ 1.22
PDLIM7-209ENST00000503346 HIBADHP31937 336 aaKnown RBP22.64■■□□□ 1.21
PDLIM7-209ENST00000503346 EAPPQ56P03 285 aaPredicted RBP22.64■■□□□ 1.21
PDLIM7-209ENST00000503346 MICALL2Q8IY33 904 aa22.64■■□□□ 1.21
PDLIM7-209ENST00000503346 GMLQ99445 158 aa22.64■■□□□ 1.21
PDLIM7-209ENST00000503346 IFIT1P09914 478 aaKnown RBP22.63■■□□□ 1.21
PDLIM7-209ENST00000503346 GYG1P46976 350 aa22.63■■□□□ 1.21
PDLIM7-209ENST00000503346 TTLL5Q6EMB2 1281 aa22.63■■□□□ 1.21
PDLIM7-209ENST00000503346 CHADLQ6NUI6 762 aa22.63■■□□□ 1.21
PDLIM7-209ENST00000503346 CEP85Q6P2H3 762 aa22.63■■□□□ 1.21
PDLIM7-209ENST00000503346 FBXO33Q7Z6M2 555 aa22.63■■□□□ 1.21
PDLIM7-209ENST00000503346 LPIN2Q92539 896 aa22.63■■□□□ 1.21
PDLIM7-209ENST00000503346 SHTN1A0MZ66 631 aa22.62■■□□□ 1.21
PDLIM7-209ENST00000503346 H7C1D1 291 aa22.62■■□□□ 1.21
PDLIM7-209ENST00000503346 RRP1P56182 461 aaKnown RBP22.62■■□□□ 1.21
PDLIM7-209ENST00000503346 GTF2IP78347 998 aa22.62■■□□□ 1.21
PDLIM7-209ENST00000503346 TDRD7Q8NHU6 1098 aaKnown RBP22.62■■□□□ 1.21
PDLIM7-209ENST00000503346 MYO3BQ8WXR4 1341 aa22.61■■□□□ 1.21
PDLIM7-209ENST00000503346 SLC5A1P13866 664 aa22.61■■□□□ 1.21
PDLIM7-209ENST00000503346 CAVIN4Q5BKX8 364 aa22.61■■□□□ 1.21
PDLIM7-209ENST00000503346 FBXW7Q969H0 707 aa22.61■■□□□ 1.21
PDLIM7-209ENST00000503346 SASH1O94885 1247 aa22.6■■□□□ 1.21
PDLIM7-209ENST00000503346 ZNF280AP59817 542 aaPredicted RBP22.6■■□□□ 1.21
PDLIM7-209ENST00000503346 ATP2B3Q16720 1220 aa22.6■■□□□ 1.21
PDLIM7-209ENST00000503346 ADAMTSL1Q8N6G6 1762 aa22.6■■□□□ 1.21
PDLIM7-209ENST00000503346 PSME4Q14997 1843 aa22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 FKBP1AP62942 108 aaKnown RBP22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 G3BP1Q13283 466 aaKnown RBP eCLIP22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 VPS37DQ86XT2 251 aa22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 TRPM4Q8TD43 1214 aa22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 MXD3Q9BW11 206 aa22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 CLEC11AQ9Y240 323 aa22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 NOP58Q9Y2X3 529 aaKnown RBP22.59■■□□□ 1.21
PDLIM7-209ENST00000503346 FAM205AQ6ZU69 1335 aa22.58■■□□□ 1.21
PDLIM7-209ENST00000503346 USP17L8P0C7I0 530 aa22.58■■□□□ 1.21
PDLIM7-209ENST00000503346 HIRAP54198 1017 aaPredicted RBP22.58■■□□□ 1.21
PDLIM7-209ENST00000503346 TFCP2Q12800 502 aa22.58■■□□□ 1.21
PDLIM7-209ENST00000503346 RPAP2Q8IXW5 612 aaPredicted RBP22.58■■□□□ 1.21
PDLIM7-209ENST00000503346 HSPA6P17066 643 aa22.57■■□□□ 1.2
PDLIM7-209ENST00000503346 MMP14P50281 582 aa22.57■■□□□ 1.2
PDLIM7-209ENST00000503346 BCAMP50895 628 aa22.57■■□□□ 1.2
PDLIM7-209ENST00000503346 SAMD7Q7Z3H4 446 aa22.57■■□□□ 1.2
PDLIM7-209ENST00000503346 ZC3H15Q8WU90 426 aaKnown RBP22.57■■□□□ 1.2
PDLIM7-209ENST00000503346 PGAP2Q9UHJ9 254 aa22.57■■□□□ 1.2
PDLIM7-209ENST00000503346 AKAP2Q9Y2D5 859 aa22.57■■□□□ 1.2
PDLIM7-209ENST00000503346 SURF6O75683 361 aaKnown RBP22.56■■□□□ 1.2
PDLIM7-209ENST00000503346 EGFRP00533 1210 aa22.56■■□□□ 1.2
PDLIM7-209ENST00000503346 CERS5Q8N5B7 392 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 362.5 ms