RNA–Protein interactions for RNA: ENST00000502991.5

RFC1-205, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-205ENST00000502991 DOC2BQ14184 412 aa7.55□□□□□ -1.2
RFC1-205ENST00000502991 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
RFC1-205ENST00000502991 FBXO11Q86XK2 927 aa7.55□□□□□ -1.2
RFC1-205ENST00000502991 SH2B1Q9NRF2 756 aaPredicted RBP7.55□□□□□ -1.2
RFC1-205ENST00000502991 SOWAHDA6NJG2 315 aa7.54□□□□□ -1.2
RFC1-205ENST00000502991 BRD1O95696 1058 aa7.54□□□□□ -1.2
RFC1-205ENST00000502991 GATA4P43694 442 aa7.54□□□□□ -1.2
RFC1-205ENST00000502991 USPL1Q5W0Q7 1092 aa7.54□□□□□ -1.2
RFC1-205ENST00000502991 SNX29Q8TEQ0 813 aa7.54□□□□□ -1.2
RFC1-205ENST00000502991 CARD10Q9BWT7 1032 aa7.54□□□□□ -1.2
RFC1-205ENST00000502991 DZANK1Q9NVP4 752 aa7.54□□□□□ -1.2
RFC1-205ENST00000502991 LOC105371045A0A1W2PR82 267 aa7.53□□□□□ -1.2
RFC1-205ENST00000502991 NFKBIEO00221 500 aa7.53□□□□□ -1.2
RFC1-205ENST00000502991 EHHADHQ08426 723 aa7.53□□□□□ -1.2
RFC1-205ENST00000502991 MBTPS1Q14703 1052 aa7.53□□□□□ -1.2
RFC1-205ENST00000502991 SETDB1Q15047 1291 aa7.53□□□□□ -1.2
RFC1-205ENST00000502991 USP21Q9UK80 565 aa7.53□□□□□ -1.2
RFC1-205ENST00000502991 PPME1Q9Y570 386 aa7.53□□□□□ -1.2
RFC1-205ENST00000502991 NDUFB5O43674 189 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 EPHA1P21709 976 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 CDC27P30260 824 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 DTWD1Q8N5C7 304 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 LENG1Q96BZ8 264 aaPredicted RBP7.52□□□□□ -1.21
RFC1-205ENST00000502991 NACC1Q96RE7 527 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 OSMRQ99650 979 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 ZKSCAN3Q9BRR0 538 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 BIN2Q9UBW5 565 aaPredicted RBP7.52□□□□□ -1.21
RFC1-205ENST00000502991 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
RFC1-205ENST00000502991 C9orf172C9J069 976 aa7.51□□□□□ -1.21
RFC1-205ENST00000502991 DLL1O00548 723 aa7.51□□□□□ -1.21
RFC1-205ENST00000502991 ORC1Q13415 861 aa7.51□□□□□ -1.21
RFC1-205ENST00000502991 ADGRE1Q14246 886 aa7.51□□□□□ -1.21
RFC1-205ENST00000502991 PEAR1Q5VY43 1037 aaPredicted RBP7.51□□□□□ -1.21
RFC1-205ENST00000502991 TMC1Q8TDI8 760 aa7.51□□□□□ -1.21
RFC1-205ENST00000502991 ZFYVE28Q9HCC9 887 aa7.51□□□□□ -1.21
RFC1-205ENST00000502991 GNEQ9Y223 722 aaKnown RBP7.51□□□□□ -1.21
RFC1-205ENST00000502991 PDE2AO00408 941 aaPredicted RBP7.5□□□□□ -1.21
RFC1-205ENST00000502991 GPR182O15218 404 aa7.5□□□□□ -1.21
RFC1-205ENST00000502991 ALX3O95076 343 aa7.5□□□□□ -1.21
RFC1-205ENST00000502991 PTPRAP18433 802 aa7.5□□□□□ -1.21
RFC1-205ENST00000502991 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
RFC1-205ENST00000502991 PMEPA1Q969W9 287 aa7.5□□□□□ -1.21
RFC1-205ENST00000502991 TPSG1Q9NRR2 321 aa7.5□□□□□ -1.21
RFC1-205ENST00000502991 KCNK4Q9NYG8 393 aa7.5□□□□□ -1.21
RFC1-205ENST00000502991 AMOTL2Q9Y2J4 779 aa7.5□□□□□ -1.21
RFC1-205ENST00000502991 METTL12A8MUP2 240 aa7.49□□□□□ -1.21
RFC1-205ENST00000502991 DDX3YO15523 660 aaKnown RBP7.49□□□□□ -1.21
RFC1-205ENST00000502991 IGHA2P01877 340 aa7.49□□□□□ -1.21
RFC1-205ENST00000502991 IREB2P48200 963 aaKnown RBP7.49□□□□□ -1.21
RFC1-205ENST00000502991 HGSNATQ68CP4 663 aa7.49□□□□□ -1.21
RFC1-205ENST00000502991 NXPE3Q969Y0 559 aa7.49□□□□□ -1.21
RFC1-205ENST00000502991 NIF3L1Q9GZT8 377 aa7.49□□□□□ -1.21
RFC1-205ENST00000502991 EDN3P14138 238 aa7.48□□□□□ -1.21
RFC1-205ENST00000502991 NOS3P29474 1203 aa7.48□□□□□ -1.21
RFC1-205ENST00000502991 FOXD4L6Q3SYB3 417 aaPredicted RBP7.48□□□□□ -1.21
RFC1-205ENST00000502991 IGF2-ASQ6U949 168 aa7.48□□□□□ -1.21
RFC1-205ENST00000502991 FOXD4L3Q6VB84 417 aaPredicted RBP7.48□□□□□ -1.21
RFC1-205ENST00000502991 TXNRD3Q86VQ6 643 aa7.48□□□□□ -1.21
RFC1-205ENST00000502991 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
RFC1-205ENST00000502991 FAM129BQ96TA1 746 aa7.48□□□□□ -1.21
RFC1-205ENST00000502991 GZF1Q9H116 711 aaPredicted RBP7.48□□□□□ -1.21
RFC1-205ENST00000502991 FSCN2O14926 492 aa7.47□□□□□ -1.21
RFC1-205ENST00000502991 IGSF3O75054 1194 aa7.47□□□□□ -1.21
RFC1-205ENST00000502991 WISP1O95388 367 aa7.47□□□□□ -1.21
RFC1-205ENST00000502991 NRG1Q02297 640 aaPredicted RBP7.47□□□□□ -1.21
RFC1-205ENST00000502991 AGGF1Q8N302 714 aaeCLIP7.47□□□□□ -1.21
RFC1-205ENST00000502991 ASAP3Q8TDY4 903 aa7.47□□□□□ -1.21
RFC1-205ENST00000502991 KLHDC7BQ96G42 594 aa7.47□□□□□ -1.21
RFC1-205ENST00000502991 ADAM19Q9H013 955 aa7.47□□□□□ -1.21
RFC1-205ENST00000502991 TM4SF5O14894 197 aa7.46□□□□□ -1.22
RFC1-205ENST00000502991 PDE3BQ13370 1112 aa7.46□□□□□ -1.22
RFC1-205ENST00000502991 TMEM102Q8N9M5 508 aaPredicted RBP7.46□□□□□ -1.22
RFC1-205ENST00000502991 SLC7A3Q8WY07 619 aa7.46□□□□□ -1.22
RFC1-205ENST00000502991 MUC3BQ9H195 1237 aa7.46□□□□□ -1.22
RFC1-205ENST00000502991 SOX13Q9UN79 622 aa7.46□□□□□ -1.22
RFC1-205ENST00000502991 A0A1W2PP55 124 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 K7ELQ4 463 aaPredicted RBP7.45□□□□□ -1.22
RFC1-205ENST00000502991 EIF1AYO14602 144 aaKnown RBP7.45□□□□□ -1.22
RFC1-205ENST00000502991 ADAM23O75077 832 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 ADAM11O75078 769 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 RSPO4Q2I0M5 234 aaPredicted RBP7.45□□□□□ -1.22
RFC1-205ENST00000502991 TMC7Q7Z402 723 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 VN1R5Q7Z5H4 357 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 GALNT12Q8IXK2 581 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 CACTIN-AS1Q8N1I8 211 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 MEGF10Q96KG7 1140 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 SEMA6BQ9H3T3 888 aa7.45□□□□□ -1.22
RFC1-205ENST00000502991 FAM177BA6PVY3 158 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 H3BRJ5 948 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 MAPK1P28482 360 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 CD68P34810 354 aaPredicted RBP7.44□□□□□ -1.22
RFC1-205ENST00000502991 RBM25P49756 843 aaKnown RBP7.44□□□□□ -1.22
RFC1-205ENST00000502991 SPRED3Q2MJR0 410 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 UBASH3BQ8TF42 649 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 FOXD4L4Q8WXT5 416 aaPredicted RBP7.44□□□□□ -1.22
RFC1-205ENST00000502991 NPHS2Q9NP85 383 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 SEC31BQ9NQW1 1179 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 DCTN4Q9UJW0 460 aa7.44□□□□□ -1.22
RFC1-205ENST00000502991 SHROOM4Q9ULL8 1493 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms