RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 PODNQ7Z5L7 613 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 COA1Q9GZY4 146 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 TAF1DQ9H5J8 278 aaPredicted RBP9.09□□□□□ -0.95
USP46-203ENST00000502443 PA2G4Q9UQ80 394 aaKnown RBP9.09□□□□□ -0.95
USP46-203ENST00000502443 SCN9AQ15858 1988 aa9.09□□□□□ -0.95
USP46-203ENST00000502443 PNMA6EA0A0J9YXQ4 647 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 USP17L3A6NCW0 530 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 USP17L4A6NCW7 530 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 CIAO1O76071 339 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 EPS15P42566 896 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 PDE3AQ14432 1141 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 EAPPQ56P03 285 aaPredicted RBP9.08□□□□□ -0.96
USP46-203ENST00000502443 C20orf194Q5TEA3 1177 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 C15orf52Q6ZUT6 534 aaKnown RBP9.08□□□□□ -0.96
USP46-203ENST00000502443 USP17L1Q7RTZ2 530 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 ATG9AQ7Z3C6 839 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 ZNF804AQ7Z570 1209 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 VGLL2Q8N8G2 317 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 FBXW7Q969H0 707 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 COPRSQ9NQ92 184 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 GPRC5DQ9NZD1 345 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 FBXO3Q9UK99 471 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 DDX19BQ9UMR2 479 aa9.08□□□□□ -0.96
USP46-203ENST00000502443 ZBTB12Q9Y330 459 aaPredicted RBP9.08□□□□□ -0.96
USP46-203ENST00000502443 IRS2Q9Y4H2 1338 aa9.07□□□□□ -0.96
USP46-203ENST00000502443 VIL1P09327 827 aaKnown RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 IFIT1P09914 478 aaKnown RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 IL15P40933 162 aaPredicted RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 GYG1P46976 350 aa9.07□□□□□ -0.96
USP46-203ENST00000502443 ATP8B2P98198 1209 aa9.07□□□□□ -0.96
USP46-203ENST00000502443 PUM3Q15397 648 aaKnown RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 PNMA8AQ86V59 439 aaPredicted RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 CHMP4BQ9H444 224 aaKnown RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 CD209Q9NNX6 404 aa9.07□□□□□ -0.96
USP46-203ENST00000502443 CEP126Q9P2H0 1117 aa9.07□□□□□ -0.96
USP46-203ENST00000502443 CNOT7Q9UIV1 285 aaKnown RBP9.07□□□□□ -0.96
USP46-203ENST00000502443 PSME4Q14997 1843 aa9.07□□□□□ -0.96
USP46-203ENST00000502443 SHTN1A0MZ66 631 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 H7C1D1 291 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 POTEIP0CG38 1075 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 POTEJP0CG39 1038 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 SLC5A1P13866 664 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 RPS12P25398 132 aaKnown RBP9.06□□□□□ -0.96
USP46-203ENST00000502443 HIBADHP31937 336 aaKnown RBP9.06□□□□□ -0.96
USP46-203ENST00000502443 GTF2IP78347 998 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 G3BP1Q13283 466 aaKnown RBP eCLIP9.06□□□□□ -0.96
USP46-203ENST00000502443 CAVIN4Q5BKX8 364 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 TTLL5Q6EMB2 1281 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 RSBN1LQ6PCB5 846 aaPredicted RBP9.06□□□□□ -0.96
USP46-203ENST00000502443 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 MICALL2Q8IY33 904 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 SMC1BQ8NDV3 1235 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 SSH3Q8TE77 659 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 DPF2Q92785 391 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 FAM84BQ96KN1 310 aaPredicted RBP9.06□□□□□ -0.96
USP46-203ENST00000502443 ADARB2Q9NS39 739 aaKnown RBP9.06□□□□□ -0.96
USP46-203ENST00000502443 ZBTB40Q9NUA8 1239 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
USP46-203ENST00000502443 SURF6O75683 361 aaKnown RBP9.05□□□□□ -0.96
USP46-203ENST00000502443 IL1R1P14778 569 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 FGFR2P21802 821 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 RRP1P56182 461 aaKnown RBP9.05□□□□□ -0.96
USP46-203ENST00000502443 FSTL1Q12841 308 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 POLA2Q14181 598 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 ATP2B3Q16720 1220 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 DACT2Q5SW24 774 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 STRIP1Q5VSL9 837 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 CHADLQ6NUI6 762 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 CEP85Q6P2H3 762 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 USP50Q70EL3 339 aaPredicted RBP9.05□□□□□ -0.96
USP46-203ENST00000502443 LDHDQ86WU2 507 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 PIAS4Q8N2W9 510 aaPredicted RBP9.05□□□□□ -0.96
USP46-203ENST00000502443 AGBL3Q8NEM8 1001 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 LPIN2Q92539 896 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 MXD3Q9BW11 206 aa9.05□□□□□ -0.96
USP46-203ENST00000502443 FRAT2O75474 233 aaPredicted RBP9.04□□□□□ -0.96
USP46-203ENST00000502443 SASH1O94885 1247 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 USP17L8P0C7I0 530 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 BCAMP50895 628 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 TFCP2Q12800 502 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 OS9Q13438 667 aaPredicted RBP9.04□□□□□ -0.96
USP46-203ENST00000502443 RBM26Q5T8P6 1007 aaKnown RBP9.04□□□□□ -0.96
USP46-203ENST00000502443 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 FBXO33Q7Z6M2 555 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 TDRD7Q8NHU6 1098 aaKnown RBP9.04□□□□□ -0.96
USP46-203ENST00000502443 GMLQ99445 158 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 IQSEC3Q9UPP2 1182 aaPredicted RBP9.04□□□□□ -0.96
USP46-203ENST00000502443 JAG2Q9Y219 1238 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 MYO3BQ8WXR4 1341 aa9.04□□□□□ -0.96
USP46-203ENST00000502443 EGFRP00533 1210 aa9.03□□□□□ -0.96
USP46-203ENST00000502443 TIMM10P62072 90 aa9.03□□□□□ -0.96
USP46-203ENST00000502443 TBC1D10BQ4KMP7 808 aaPredicted RBP9.03□□□□□ -0.96
USP46-203ENST00000502443 MAP1SQ66K74 1059 aaPredicted RBP9.03□□□□□ -0.96
USP46-203ENST00000502443 KIAA0825Q8IV33 1275 aa9.03□□□□□ -0.96
USP46-203ENST00000502443 RPAP2Q8IXW5 612 aaPredicted RBP9.03□□□□□ -0.96
USP46-203ENST00000502443 OGFOD1Q8N543 542 aa9.03□□□□□ -0.96
USP46-203ENST00000502443 TRPM4Q8TD43 1214 aa9.03□□□□□ -0.96
USP46-203ENST00000502443 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
USP46-203ENST00000502443 ZNF646O15015 1829 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms