RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 LATS2Q9NRM7 1088 aa4.67□□□□□ -1.66
SMAD1-203ENST00000502342 USP21Q9UK80 565 aa4.67□□□□□ -1.66
SMAD1-203ENST00000502342 PPME1Q9Y570 386 aa4.67□□□□□ -1.66
SMAD1-203ENST00000502342 FAM177BA6PVY3 158 aa4.66□□□□□ -1.66
SMAD1-203ENST00000502342 C9orf172C9J069 976 aa4.66□□□□□ -1.66
SMAD1-203ENST00000502342 NFKBIEO00221 500 aa4.66□□□□□ -1.66
SMAD1-203ENST00000502342 IGHA1P01876 353 aa4.66□□□□□ -1.66
SMAD1-203ENST00000502342 ORC1Q13415 861 aa4.66□□□□□ -1.66
SMAD1-203ENST00000502342 DZANK1Q9NVP4 752 aa4.66□□□□□ -1.66
SMAD1-203ENST00000502342 PDE2AO00408 941 aaPredicted RBP4.65□□□□□ -1.67
SMAD1-203ENST00000502342 ALX3O95076 343 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 PROCP04070 461 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 PDIA4P13667 645 aaKnown RBP4.65□□□□□ -1.67
SMAD1-203ENST00000502342 ELNP15502 786 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 IREB2P48200 963 aaKnown RBP4.65□□□□□ -1.67
SMAD1-203ENST00000502342 SETDB1Q15047 1291 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 HGSNATQ68CP4 663 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 ASAP3Q8TDY4 903 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 SNX29Q8TEQ0 813 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 NXPE3Q969Y0 559 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 ZKSCAN3Q9BRR0 538 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 TRAIPQ9BWF2 469 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 CARD10Q9BWT7 1032 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 GNEQ9Y223 722 aaKnown RBP4.65□□□□□ -1.67
SMAD1-203ENST00000502342 AMOTL2Q9Y2J4 779 aa4.65□□□□□ -1.67
SMAD1-203ENST00000502342 METTL12A8MUP2 240 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 DDX3YO15523 660 aaKnown RBP4.64□□□□□ -1.67
SMAD1-203ENST00000502342 NEFLP07196 543 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 PTPRAP18433 802 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 EPHA1P21709 976 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 MAPK1P28482 360 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 PDE3BQ13370 1112 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 PEAR1Q5VY43 1037 aaPredicted RBP4.64□□□□□ -1.67
SMAD1-203ENST00000502342 GALNT11Q8NCW6 608 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 SLC7A3Q8WY07 619 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 LENG1Q96BZ8 264 aaPredicted RBP4.64□□□□□ -1.67
SMAD1-203ENST00000502342 KLHDC7BQ96G42 594 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 NACC1Q96RE7 527 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 KCNK4Q9NYG8 393 aa4.64□□□□□ -1.67
SMAD1-203ENST00000502342 A0A1W2PP55 124 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 DLL1O00548 723 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 FSCN2O14926 492 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 GPR182O15218 404 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 EDN3P14138 238 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 KCNA1Q09470 495 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 SPRED3Q2MJR0 410 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 FAM117BQ6P1L5 589 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 IGF2-ASQ6U949 168 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 CACTIN-AS1Q8N1I8 211 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 DTWD1Q8N5C7 304 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 WFDC12Q8WWY7 111 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 ADAM19Q9H013 955 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 MUC3BQ9H195 1237 aa4.63□□□□□ -1.67
SMAD1-203ENST00000502342 EIF1AYO14602 144 aaKnown RBP4.62□□□□□ -1.67
SMAD1-203ENST00000502342 CPNE3O75131 537 aaKnown RBP4.62□□□□□ -1.67
SMAD1-203ENST00000502342 CABP4P57796 275 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 PLCB3Q01970 1234 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 NRG1Q02297 640 aaPredicted RBP4.62□□□□□ -1.67
SMAD1-203ENST00000502342 ADGRE1Q14246 886 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 MBTPS1Q14703 1052 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 TMC7Q7Z402 723 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 AGGF1Q8N302 714 aaeCLIP4.62□□□□□ -1.67
SMAD1-203ENST00000502342 TMEM102Q8N9M5 508 aaPredicted RBP4.62□□□□□ -1.67
SMAD1-203ENST00000502342 CITED4Q96RK1 184 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 FAM129BQ96TA1 746 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 TPSG1Q9NRR2 321 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 DCTN4Q9UJW0 460 aa4.62□□□□□ -1.67
SMAD1-203ENST00000502342 PATL2C9JE40 543 aaKnown RBP4.61□□□□□ -1.67
SMAD1-203ENST00000502342 SOX1O00570 391 aaPredicted RBP4.61□□□□□ -1.67
SMAD1-203ENST00000502342 GADD45BO75293 160 aaPredicted RBP4.61□□□□□ -1.67
SMAD1-203ENST00000502342 NOS3P29474 1203 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 CD68P34810 354 aaPredicted RBP4.61□□□□□ -1.67
SMAD1-203ENST00000502342 TXNRD3Q86VQ6 643 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 GALNT12Q8IXK2 581 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 EPS8L3Q8TE67 593 aaKnown RBP4.61□□□□□ -1.67
SMAD1-203ENST00000502342 BSNDQ8WZ55 320 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 TP53INP1Q96A56 240 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 CCDC74AQ96AQ1 378 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 CSRNP1Q96S65 589 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 RBCK1Q9BYM8 510 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 EHD4Q9H223 541 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 SEMA6BQ9H3T3 888 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 LIN7BQ9HAP6 207 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 SEC31BQ9NQW1 1179 aa4.61□□□□□ -1.67
SMAD1-203ENST00000502342 A0A096LPE4 126 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 A0A1W2PPZ6 126 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 WISP1O95388 367 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 IGHA2P01877 340 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 GRIA4P48058 902 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 NLRP12P59046 1061 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 IKBKEQ14164 716 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 SUZ12Q15022 739 aaKnown RBP4.6□□□□□ -1.67
SMAD1-203ENST00000502342 DUOXA2Q1HG44 320 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 FOXD4L6Q3SYB3 417 aaPredicted RBP4.6□□□□□ -1.67
SMAD1-203ENST00000502342 PI16Q6UXB8 463 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 FOXD4L3Q6VB84 417 aaPredicted RBP4.6□□□□□ -1.67
SMAD1-203ENST00000502342 VN1R5Q7Z5H4 357 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 DCAF11Q8TEB1 546 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 DMRTB1Q96MA1 342 aa4.6□□□□□ -1.67
SMAD1-203ENST00000502342 AKTIPQ9H8T0 292 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms