RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 EPHA1P21709 976 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 LRP8Q14114 963 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 ALKBH2Q6NS38 261 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 PHLDB3Q6NSJ2 640 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 TXNDC11Q6PKC3 985 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 AGGF1Q8N302 714 aaeCLIP7.25□□□□□ -1.25
CBX3-208ENST00000497498 KLHL23Q8NBE8 558 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 SH2B1Q9NRF2 756 aaPredicted RBP7.25□□□□□ -1.25
CBX3-208ENST00000497498 KCNK4Q9NYG8 393 aa7.25□□□□□ -1.25
CBX3-208ENST00000497498 WISP1O95388 367 aa7.24□□□□□ -1.25
CBX3-208ENST00000497498 CES1P23141 567 aa7.24□□□□□ -1.25
CBX3-208ENST00000497498 C8orf34Q49A92 452 aa7.24□□□□□ -1.25
CBX3-208ENST00000497498 PMEPA1Q969W9 287 aa7.24□□□□□ -1.25
CBX3-208ENST00000497498 CHRDQ9H2X0 955 aa7.24□□□□□ -1.25
CBX3-208ENST00000497498 DZANK1Q9NVP4 752 aa7.24□□□□□ -1.25
CBX3-208ENST00000497498 RNF112Q9ULX5 631 aa7.24□□□□□ -1.25
CBX3-208ENST00000497498 A6NHS1 94 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 GLB1P16278 677 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 CDC25BP30305 580 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 MTMR3Q13615 1198 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 FAM117BQ6P1L5 589 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 TTC16Q8NEE8 873 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 WNT8BQ93098 351 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 UBL7Q96S82 380 aaPredicted RBP7.23□□□□□ -1.25
CBX3-208ENST00000497498 CARD10Q9BWT7 1032 aa7.23□□□□□ -1.25
CBX3-208ENST00000497498 HYAL3O43820 417 aaPredicted RBP7.22□□□□□ -1.25
CBX3-208ENST00000497498 FAM13AO94988 1023 aa7.22□□□□□ -1.25
CBX3-208ENST00000497498 ACPPP15309 386 aa7.22□□□□□ -1.25
CBX3-208ENST00000497498 KIAA1211Q6ZU35 1233 aa7.22□□□□□ -1.25
CBX3-208ENST00000497498 SEC31BQ9NQW1 1179 aa7.22□□□□□ -1.25
CBX3-208ENST00000497498 POLIQ9UNA4 740 aa7.22□□□□□ -1.25
CBX3-208ENST00000497498 FAM177BA6PVY3 158 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 H3BRJ5 948 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 PDE2AO00408 941 aaPredicted RBP7.21□□□□□ -1.26
CBX3-208ENST00000497498 ADAM11O75078 769 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 FSTP19883 344 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 PIP4K2BP78356 416 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 SF3B2Q13435 895 aaKnown RBP7.21□□□□□ -1.26
CBX3-208ENST00000497498 ACAD11Q709F0 780 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 FOXD4L4Q8WXT5 416 aaPredicted RBP7.21□□□□□ -1.26
CBX3-208ENST00000497498 KLHDC7BQ96G42 594 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 CEP41Q9BYV8 373 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 MTMR7Q9Y216 660 aa7.21□□□□□ -1.26
CBX3-208ENST00000497498 DDX3YO15523 660 aaKnown RBP7.2□□□□□ -1.26
CBX3-208ENST00000497498 TNFRSF21O75509 655 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 USP5P45974 858 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 CABP4P57796 275 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
CBX3-208ENST00000497498 DUOXA2Q1HG44 320 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 ARMC10Q8N2F6 343 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 TMEM102Q8N9M5 508 aaPredicted RBP7.2□□□□□ -1.26
CBX3-208ENST00000497498 HHIPQ96QV1 700 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 OSGEPQ9NPF4 335 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 SOX13Q9UN79 622 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 RAXQ9Y2V3 346 aa7.2□□□□□ -1.26
CBX3-208ENST00000497498 CARNS1A5YM72 827 aa7.19□□□□□ -1.26
CBX3-208ENST00000497498 FZD6O60353 706 aa7.19□□□□□ -1.26
CBX3-208ENST00000497498 TRPA1O75762 1119 aa7.19□□□□□ -1.26
CBX3-208ENST00000497498 EHHADHQ08426 723 aa7.19□□□□□ -1.26
CBX3-208ENST00000497498 UVSSAQ2YD98 709 aa7.19□□□□□ -1.26
CBX3-208ENST00000497498 NXPE3Q969Y0 559 aa7.19□□□□□ -1.26
CBX3-208ENST00000497498 FAM46AQ96IP4 442 aaKnown RBP7.19□□□□□ -1.26
CBX3-208ENST00000497498 EREGO14944 169 aa7.18□□□□□ -1.26
CBX3-208ENST00000497498 DHX15O43143 795 aaKnown RBP7.18□□□□□ -1.26
CBX3-208ENST00000497498 PHACTR2O75167 634 aa7.18□□□□□ -1.26
CBX3-208ENST00000497498 AAMPQ13685 434 aa7.18□□□□□ -1.26
CBX3-208ENST00000497498 NBPF11Q86T75 865 aa7.18□□□□□ -1.26
CBX3-208ENST00000497498 SNX29Q8TEQ0 813 aa7.18□□□□□ -1.26
CBX3-208ENST00000497498 UBASH3BQ8TF42 649 aa7.18□□□□□ -1.26
CBX3-208ENST00000497498 OSMRQ99650 979 aa7.18□□□□□ -1.26
CBX3-208ENST00000497498 GSC2O15499 205 aa7.17□□□□□ -1.26
CBX3-208ENST00000497498 EDN3P14138 238 aa7.17□□□□□ -1.26
CBX3-208ENST00000497498 GJD3Q8N144 294 aa7.17□□□□□ -1.26
CBX3-208ENST00000497498 ZKSCAN3Q9BRR0 538 aa7.17□□□□□ -1.26
CBX3-208ENST00000497498 STOML1Q9UBI4 398 aa7.17□□□□□ -1.26
CBX3-208ENST00000497498 VN1R5Q7Z5H4 357 aa7.16□□□□□ -1.26
CBX3-208ENST00000497498 BSNDQ8WZ55 320 aa7.16□□□□□ -1.26
CBX3-208ENST00000497498 MYRFLQ96LU7 910 aa7.16□□□□□ -1.26
CBX3-208ENST00000497498 BHLHE41Q9C0J9 482 aaPredicted RBP7.16□□□□□ -1.26
CBX3-208ENST00000497498 CCDC87Q9NVE4 849 aa7.16□□□□□ -1.26
CBX3-208ENST00000497498 FOXD3Q9UJU5 478 aaPredicted RBP7.16□□□□□ -1.26
CBX3-208ENST00000497498 USTQ9Y2C2 406 aa7.16□□□□□ -1.26
CBX3-208ENST00000497498 ABL1P00519 1130 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 IGLV1-40P01703 118 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 C19orf57Q0VDD7 668 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 PEAR1Q5VY43 1037 aaPredicted RBP7.15□□□□□ -1.26
CBX3-208ENST00000497498 ANKRD34AQ69YU3 496 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 C14orf37Q86TY3 774 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 UTP4Q969X6 686 aaKnown RBP7.15□□□□□ -1.26
CBX3-208ENST00000497498 PSMG3-AS1Q96PY0 264 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 ANO2Q9NQ90 1003 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 EGFL7Q9UHF1 273 aa7.15□□□□□ -1.26
CBX3-208ENST00000497498 MEGF11A6BM72 1044 aa7.14□□□□□ -1.27
CBX3-208ENST00000497498 SOX1O00570 391 aaPredicted RBP7.14□□□□□ -1.27
CBX3-208ENST00000497498 ARL4DP49703 201 aa7.14□□□□□ -1.27
CBX3-208ENST00000497498 NLRP12P59046 1061 aa7.14□□□□□ -1.27
CBX3-208ENST00000497498 ZNF211Q13398 564 aaPredicted RBP7.14□□□□□ -1.27
CBX3-208ENST00000497498 HGSNATQ68CP4 663 aa7.14□□□□□ -1.27
CBX3-208ENST00000497498 SLC7A3Q8WY07 619 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 226.9 ms