RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 DMRTC2Q8IXT2 367 aaPredicted RBP4□□□□□ -1.77
SNRNP48-202ENST00000496946 ELP3Q9H9T3 547 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 BIN2Q9UBW5 565 aaPredicted RBP4□□□□□ -1.77
SNRNP48-202ENST00000496946 MARCH6O60337 910 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 MARSP56192 900 aaKnown RBP4□□□□□ -1.77
SNRNP48-202ENST00000496946 FOXD4L6Q3SYB3 417 aaPredicted RBP4□□□□□ -1.77
SNRNP48-202ENST00000496946 HGSNATQ68CP4 663 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 CASC1Q6TDU7 716 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 FOXD4L3Q6VB84 417 aaPredicted RBP4□□□□□ -1.77
SNRNP48-202ENST00000496946 MICALL1Q8N3F8 863 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 SPATA32Q96LK8 384 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 MYH16Q9H6N6 1097 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 NSFL1CQ9UNZ2 370 aaKnown RBP4□□□□□ -1.77
SNRNP48-202ENST00000496946 AMOTL2Q9Y2J4 779 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 DCAF1Q9Y4B6 1507 aa4□□□□□ -1.77
SNRNP48-202ENST00000496946 UNCXA6NJT0 531 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 SIN3BO75182 1162 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 TNFRSF25Q93038 417 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 CARD10Q9BWT7 1032 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 RASSF4Q9H2L5 321 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 PPP1R1BQ9UD71 204 aaPredicted RBP3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 SUPT16HQ9Y5B9 1047 aaKnown RBP3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 ANKRD62A6NC57 917 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 TNFRSF21O75509 655 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 FKBP4Q02790 459 aaKnown RBP eCLIP3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 C20orf204Q6ZNR8 217 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 TSHZ1Q6ZSZ6 1077 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 TXNDC2Q86VQ3 553 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 NCAPG2Q86XI2 1143 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 TMC1Q8TDI8 760 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 DCAF5Q96JK2 942 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 CHRDQ9H2X0 955 aa3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 SH2B1Q9NRF2 756 aaPredicted RBP3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 ABI2Q9NYB9 513 aaPredicted RBP3.99□□□□□ -1.77
SNRNP48-202ENST00000496946 ICMTO60725 284 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 GDF11O95390 407 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 NID1P14543 1247 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 RGS3P49796 1198 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 PLA2G4EQ3MJ16 856 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 NOM1Q5C9Z4 860 aaKnown RBP3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 CC2D1BQ5T0F9 858 aaKnown RBP3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 PEAR1Q5VY43 1037 aaPredicted RBP3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 RINLQ6ZS11 566 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 PLD4Q96BZ4 506 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 SLC52A1Q9NWF4 448 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 SH3BP1Q9Y3L3 701 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 DDX3YO15523 660 aaKnown RBP3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 LILRB5O75023 590 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 PIK3R5Q8WYR1 880 aa3.98□□□□□ -1.77
SNRNP48-202ENST00000496946 DEAF1O75398 565 aaPredicted RBP3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 ALX3O95076 343 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 HSP90AA1P07900 732 aaKnown RBP3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 EPB42P16452 691 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 EPHA1P21709 976 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 TAGLNQ01995 201 aaKnown RBP3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 CEP135Q66GS9 1140 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 ELMSAN1Q6PJG2 1045 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 CD163Q86VB7 1156 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 AGGF1Q8N302 714 aaeCLIP3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 TRPM4Q8TD43 1214 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 TMEM51Q9NW97 253 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 USTQ9Y2C2 406 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 RGS9O75916 674 aaPredicted RBP3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 IGHA2P01877 340 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 CES1P23141 567 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 GRIK5Q16478 980 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 TRAPPC3LQ5T215 181 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 GORABQ5T7V8 394 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 EGFL6Q8IUX8 553 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 SLC7A3Q8WY07 619 aa3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 POP1Q99575 1024 aaKnown RBP3.97□□□□□ -1.77
SNRNP48-202ENST00000496946 LOC102724428A0A0B4J2F2 783 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 ANP32AP39687 249 aaKnown RBP3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 ZNF157P51786 506 aaPredicted RBP3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 SIK1P57059 783 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 FAM43AQ8N2R8 423 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 ASAP3Q8TDY4 903 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 ZKSCAN3Q9BRR0 538 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 NIF3L1Q9GZT8 377 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 NPHS2Q9NP85 383 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 ENAMQ9NRM1 1142 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 TERF2IPQ9NYB0 399 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 TLR7Q9NYK1 1049 aaKnown RBP3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 WWC3Q9ULE0 1092 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 PPME1Q9Y570 386 aa3.96□□□□□ -1.77
SNRNP48-202ENST00000496946 LMTK3Q96Q04 1460 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 TPD52L2O43399 206 aaKnown RBP3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 ALAS2P22557 587 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 BAG6P46379 1132 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 LAMC2Q13753 1193 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 NLRP13Q86W25 1043 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 BEND7Q8N7W2 519 aaPredicted RBP3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 GALNT11Q8NCW6 608 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 COL26A1Q96A83 441 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.96□□□□□ -1.783e-8■■■■■ 74.5
SNRNP48-202ENST00000496946 MKL2Q9ULH7 1088 aa3.96□□□□□ -1.78
SNRNP48-202ENST00000496946 ADARB2-AS1A8MUL3 147 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 C1QTNF9BB2RNN3 333 aa3.95□□□□□ -1.78
SNRNP48-202ENST00000496946 LINC01387J3KSC0 135 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms