RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 USP17L1Q7RTZ2 530 aa9.3□□□□□ -0.92
UBP1-213ENST00000496310 CD99L2Q8TCZ2 262 aa9.3□□□□□ -0.92
UBP1-213ENST00000496310 COLQQ9Y215 455 aaPredicted RBP9.3□□□□□ -0.92
UBP1-213ENST00000496310 HTTP42858 3142 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 WNT10BO00744 389 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 TMPOP42166 694 aaKnown RBP9.29□□□□□ -0.92
UBP1-213ENST00000496310 HDGFL1Q5TGJ6 251 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 SPRYD7Q5W111 196 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 CLMNQ96JQ2 1002 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 PODXL2Q9NZ53 605 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 PCDHAC2Q9Y5I4 1007 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 BRCA2P51587 3418 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 LAMB1P07942 1786 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 PITPNM2Q9BZ72 1349 aa9.29□□□□□ -0.92
UBP1-213ENST00000496310 IGF2BP3O00425 579 aaKnown RBP eCLIP9.28□□□□□ -0.92
UBP1-213ENST00000496310 ECM2O94769 699 aaPredicted RBP9.28□□□□□ -0.92
UBP1-213ENST00000496310 KLRK1P26718 216 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 SREBF2Q12772 1141 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 DACT2Q5SW24 774 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 RIC3Q7Z5B4 369 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 TXNRD3Q86VQ6 643 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 IFNL1Q8IU54 200 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 KIAA0825Q8IV33 1275 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 MYD88Q99836 296 aa9.28□□□□□ -0.92
UBP1-213ENST00000496310 PHAXQ9H814 394 aaKnown RBP9.28□□□□□ -0.92
UBP1-213ENST00000496310 NF2P35240 595 aa9.27□□□□□ -0.93
UBP1-213ENST00000496310 ARMC9Q7Z3E5 817 aa9.27□□□□□ -0.93
UBP1-213ENST00000496310 ZBTB38Q8NAP3 1195 aaPredicted RBP9.27□□□□□ -0.93
UBP1-213ENST00000496310 PTPN22Q9Y2R2 807 aa9.27□□□□□ -0.93
UBP1-213ENST00000496310 XDHP47989 1333 aa9.27□□□□□ -0.93
UBP1-213ENST00000496310 SZT2Q5T011 3432 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 ELL2O00472 640 aaPredicted RBP9.26□□□□□ -0.93
UBP1-213ENST00000496310 CHL1O00533 1208 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 ATP2B4P23634 1241 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 GJA5P36382 358 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 CRHR2Q13324 411 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 NOM1Q5C9Z4 860 aaKnown RBP9.26□□□□□ -0.93
UBP1-213ENST00000496310 LDLRAD1Q5T700 205 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 DUSP27Q5VZP5 1158 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 ANKRD18AQ8IVF6 992 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 SLC10A4Q96EP9 437 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 WNK4Q96J92 1243 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 A0A1B0GUL6 1792 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 AOX1Q06278 1338 aa9.26□□□□□ -0.93
UBP1-213ENST00000496310 SSC5DA1L4H1 1573 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 ZNF609O15014 1411 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 F8W031 263 aaPredicted RBP9.25□□□□□ -0.93
UBP1-213ENST00000496310 H0YGN5 161 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 PDE8AO60658 829 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 SLC4A2P04920 1241 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 CCDC152Q4G0S7 254 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 PODNQ7Z5L7 613 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 OGFOD1Q8N543 542 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 PTPN18Q99952 460 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 DBF4Q9UBU7 674 aaPredicted RBP9.25□□□□□ -0.93
UBP1-213ENST00000496310 MINPP1Q9UNW1 487 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 TRIM35Q9UPQ4 493 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 JAG2Q9Y219 1238 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 AK9Q5TCS8 1911 aa9.25□□□□□ -0.93
UBP1-213ENST00000496310 CLRN2A0PK11 232 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 MANSC4A6NHS7 340 aaPredicted RBP9.24□□□□□ -0.93
UBP1-213ENST00000496310 SNAP23O00161 211 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 GTF2IP78347 998 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 TRIM28Q13263 835 aaKnown RBP9.24□□□□□ -0.93
UBP1-213ENST00000496310 INTS3Q68E01 1043 aaKnown RBP9.24□□□□□ -0.93
UBP1-213ENST00000496310 TTLL5Q6EMB2 1281 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 CFHR5Q9BXR6 569 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 DEFB129Q9H1M3 183 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 PNNQ9H307 717 aaKnown RBP9.24□□□□□ -0.93
UBP1-213ENST00000496310 GREM2Q9H772 168 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 EFCC1Q9HA90 598 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 BABAM1Q9NWV8 329 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 HYPKQ9NX55 129 aa9.24□□□□□ -0.93
UBP1-213ENST00000496310 ALDH1A1P00352 501 aa9.23□□□□□ -0.93
UBP1-213ENST00000496310 PCCAP05165 728 aaPredicted RBP9.23□□□□□ -0.93
UBP1-213ENST00000496310 CCT4P50991 539 aaKnown RBP9.23□□□□□ -0.93
UBP1-213ENST00000496310 GOLGA2Q08379 1002 aa9.23□□□□□ -0.93
UBP1-213ENST00000496310 SLC4A8Q2Y0W8 1093 aa9.23□□□□□ -0.93
UBP1-213ENST00000496310 NBPF12Q5TAG4 269 aaPredicted RBP9.23□□□□□ -0.93
UBP1-213ENST00000496310 APOBEC3FQ8IUX4 373 aaKnown RBP9.23□□□□□ -0.93
UBP1-213ENST00000496310 ARMC5Q96C12 935 aa9.23□□□□□ -0.93
UBP1-213ENST00000496310 ERO1AQ96HE7 468 aa9.23□□□□□ -0.93
UBP1-213ENST00000496310 CWC25Q9NXE8 425 aaPredicted RBP9.23□□□□□ -0.93
UBP1-213ENST00000496310 PTCH2Q9Y6C5 1203 aa9.23□□□□□ -0.93
UBP1-213ENST00000496310 MED23Q9ULK4 1368 aa9.23□□□□□ -0.93
UBP1-213ENST00000496310 DOCK3Q8IZD9 2030 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 MGAMO43451 1857 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 CTSWP56202 376 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 SP3Q02447 781 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 LMOD3Q0VAK6 560 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 STRIP1Q5VSL9 837 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 CHRDL2Q6WN34 429 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 CERS5Q8N5B7 392 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 SH3TC2Q8TF17 1288 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 OTUD5Q96G74 571 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 ZBED3Q96IU2 234 aaPredicted RBP9.22□□□□□ -0.93
UBP1-213ENST00000496310 TMEM106CQ9BVX2 250 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 ELP3Q9H9T3 547 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 VEZTQ9HBM0 779 aa9.22□□□□□ -0.93
UBP1-213ENST00000496310 MBIPQ9NS73 344 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms