RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 ABCB6Q9NP58 842 aa8.59□□□□□ -1.03
SSR3-208ENST00000496050 NFKBIEO00221 500 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 PDE2AO00408 941 aaPredicted RBP8.58□□□□□ -1.04
SSR3-208ENST00000496050 IGSF3O75054 1194 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 TRPA1O75762 1119 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 SMNDC1O75940 238 aaKnown RBP eCLIP8.58□□□□□ -1.04
SSR3-208ENST00000496050 MAP2K3P46734 347 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 GNL2Q13823 731 aaKnown RBP8.58□□□□□ -1.04
SSR3-208ENST00000496050 USP48Q86UV5 1035 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 RELL1Q8IUW5 271 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 TNFRSF25Q93038 417 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 DRC1Q96MC2 740 aa8.58□□□□□ -1.04
SSR3-208ENST00000496050 BHLHE41Q9C0J9 482 aaPredicted RBP8.58□□□□□ -1.04
SSR3-208ENST00000496050 DDX41Q9UJV9 622 aaKnown RBP8.58□□□□□ -1.04
SSR3-208ENST00000496050 A0A096LPE4 126 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 A0A1W2PPZ6 126 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 ARAFP10398 606 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 RLBP1P12271 317 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 ACPPP15309 386 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 EIF2AK2P19525 551 aaKnown RBP8.57□□□□□ -1.04
SSR3-208ENST00000496050 ADH6P28332 368 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 PWP1Q13610 501 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 FAM35AQ86V20 835 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 ASAP3Q8TDY4 903 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 RSRP1Q9BUV0 290 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 CEP44Q9C0F1 390 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 RASSF4Q9H2L5 321 aa8.57□□□□□ -1.04
SSR3-208ENST00000496050 ITPKAP23677 461 aa8.56□□□□□ -1.04
SSR3-208ENST00000496050 GRIA4P48058 902 aa8.56□□□□□ -1.04
SSR3-208ENST00000496050 CCDC85BQ15834 202 aaPredicted RBP8.56□□□□□ -1.04
SSR3-208ENST00000496050 SPRED3Q2MJR0 410 aa8.56□□□□□ -1.04
SSR3-208ENST00000496050 SV2BQ7L1I2 683 aa8.56□□□□□ -1.04
SSR3-208ENST00000496050 SREK1Q8WXA9 508 aaKnown RBP8.56□□□□□ -1.04
SSR3-208ENST00000496050 POP1Q99575 1024 aaKnown RBP8.56□□□□□ -1.04
SSR3-208ENST00000496050 CAPN10Q9HC96 672 aa8.56□□□□□ -1.04
SSR3-208ENST00000496050 ADARB2-AS1A8MUL3 147 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 CPB1P15086 417 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 ALAS2P22557 587 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 SF3A1Q15459 793 aaKnown RBP8.55□□□□□ -1.04
SSR3-208ENST00000496050 ZNF394Q53GI3 561 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 RPS26P11Q5JNZ5 115 aaPredicted RBP8.55□□□□□ -1.04
SSR3-208ENST00000496050 CEP135Q66GS9 1140 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 ELMSAN1Q6PJG2 1045 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 SLC43A3Q8NBI5 491 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 ACBD3Q9H3P7 528 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 SRA1Q9HD15 236 aaKnown RBP8.55□□□□□ -1.04
SSR3-208ENST00000496050 MBIPQ9NS73 344 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 SLC6A14Q9UN76 642 aa8.55□□□□□ -1.04
SSR3-208ENST00000496050 FAM177BA6PVY3 158 aa8.54□□□□□ -1.04
SSR3-208ENST00000496050 LCE2BO14633 110 aa8.54□□□□□ -1.04
SSR3-208ENST00000496050 RACK1P63244 317 aaKnown RBP8.54□□□□□ -1.04
SSR3-208ENST00000496050 GAS6Q14393 721 aa8.54□□□□□ -1.04
SSR3-208ENST00000496050 ERMP1Q7Z2K6 904 aa8.54□□□□□ -1.04
SSR3-208ENST00000496050 PLD4Q96BZ4 506 aa8.54□□□□□ -1.04
SSR3-208ENST00000496050 HHIPQ96QV1 700 aa8.54□□□□□ -1.04
SSR3-208ENST00000496050 KLF15Q9UIH9 416 aa8.54□□□□□ -1.04
SSR3-208ENST00000496050 ADH7P40394 386 aa8.53□□□□□ -1.04
SSR3-208ENST00000496050 ATP11AP98196 1134 aa8.53□□□□□ -1.04
SSR3-208ENST00000496050 VPS37DQ86XT2 251 aa8.53□□□□□ -1.04
SSR3-208ENST00000496050 GPR161Q8N6U8 529 aaKnown RBP8.53□□□□□ -1.04
SSR3-208ENST00000496050 BSNDQ8WZ55 320 aa8.53□□□□□ -1.04
SSR3-208ENST00000496050 INPP5FQ9Y2H2 1132 aa8.53□□□□□ -1.04
SSR3-208ENST00000496050 PCDHGB7Q9Y5F8 929 aa8.53□□□□□ -1.04
SSR3-208ENST00000496050 NEURL1BA8MQ27 555 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 H3BM21 787 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 PTPRAP18433 802 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 TPTE2Q6XPS3 522 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 CACTIN-AS1Q8N1I8 211 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 SLC16A10Q8TF71 515 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 COPRSQ9NQ92 184 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 FRRS1LQ9P0K9 344 aa8.52□□□□□ -1.05
SSR3-208ENST00000496050 PPP1R1BQ9UD71 204 aaPredicted RBP8.52□□□□□ -1.05
SSR3-208ENST00000496050 ELOA3CA0A087WX78 387 aaPredicted RBP8.51□□□□□ -1.05
SSR3-208ENST00000496050 ELOA3DA6NLF2 546 aaPredicted RBP8.51□□□□□ -1.05
SSR3-208ENST00000496050 GBP2P32456 591 aaPredicted RBP8.51□□□□□ -1.05
SSR3-208ENST00000496050 ELOA3BQ3SY89 546 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 PERM1Q5SV97 790 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 GOLGA6L1Q8N7Z2 621 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 ELOA3Q8NG57 546 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 TTC9Q92623 222 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 SMG9Q9H0W8 520 aaKnown RBP8.51□□□□□ -1.05
SSR3-208ENST00000496050 SEC31BQ9NQW1 1179 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 KBTBD4Q9NVX7 518 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 GGA1Q9UJY5 639 aa8.51□□□□□ -1.05
SSR3-208ENST00000496050 GDF2Q9UK05 429 aaPredicted RBP8.51□□□□□ -1.05
SSR3-208ENST00000496050 MINDY4BA8MYZ0 360 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 FBXO24O75426 580 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 RGS9O75916 674 aaPredicted RBP8.5□□□□□ -1.05
SSR3-208ENST00000496050 TNNI2P48788 182 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 PPP2R3AQ06190 1150 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 TMEM74Q96NL1 305 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 TINF2Q9BSI4 451 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 ADAM19Q9H013 955 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 CLEC4MQ9H2X3 399 aaPredicted RBP8.5□□□□□ -1.05
SSR3-208ENST00000496050 ZNF576Q9H609 170 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 TMEM39AQ9NV64 488 aa8.5□□□□□ -1.05
SSR3-208ENST00000496050 IGF1RP08069 1367 aa8.49□□□□□ -1.05
SSR3-208ENST00000496050 MAP3K10Q02779 954 aa8.49□□□□□ -1.05
SSR3-208ENST00000496050 ZNF787Q6DD87 383 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms