RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CWC27Q6UX04 472 aaKnown RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 ZBTB38Q8NAP3 1195 aaPredicted RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 ZNF784Q8NCA9 323 aaPredicted RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 KAZALD1Q96I82 304 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 AK7Q96M32 723 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 KIF2CQ99661 725 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 PLA2G12BQ9BX93 195 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 CCDC8Q9H0W5 538 aaPredicted RBP8.32□□□□□ -1.08
USP39-219ENST00000496047 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 ABCC12Q96J65 1359 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 COL24A1Q17RW2 1714 aa8.32□□□□□ -1.08
USP39-219ENST00000496047 EYA2O00167 538 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 FRAT2O75474 233 aaPredicted RBP8.31□□□□□ -1.08
USP39-219ENST00000496047 CYP19A1P11511 503 aaPredicted RBP8.31□□□□□ -1.08
USP39-219ENST00000496047 ATP5JP18859 108 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 HSPA4P34932 840 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 RFX5P48382 616 aaPredicted RBP8.31□□□□□ -1.08
USP39-219ENST00000496047 CASP7P55210 303 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 IFIT5Q13325 482 aaKnown RBP8.31□□□□□ -1.08
USP39-219ENST00000496047 CCDC158Q5M9N0 1113 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 GORABQ5T7V8 394 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
USP39-219ENST00000496047 UNC5CLQ8IV45 518 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 EAF2Q96CJ1 260 aaPredicted RBP8.31□□□□□ -1.08
USP39-219ENST00000496047 HMG20BQ9P0W2 317 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 CEP126Q9P2H0 1117 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 PALLDQ8WX93 1383 aa8.31□□□□□ -1.08
USP39-219ENST00000496047 CCDC171Q6TFL3 1326 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 C4AP0C0L4 1744 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 C4BP0C0L5 1744 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 ANKRD18BA2A2Z9 1011 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 C2orf72A6NCS6 295 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 MCM4P33991 863 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 ATP6V1AP38606 617 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 PRIM1P49642 420 aaKnown RBP8.3□□□□□ -1.08
USP39-219ENST00000496047 FOXO4P98177 505 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 TFCP2Q12800 502 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 KRT32Q14532 448 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 ANKRD1Q15327 319 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 PARP10Q53GL7 1025 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 EPHA10Q5JZY3 1008 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.3□□□□□ -1.08
USP39-219ENST00000496047 IL17RAQ96F46 866 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 INTS4Q96HW7 963 aaKnown RBP8.3□□□□□ -1.08
USP39-219ENST00000496047 NEUROD6Q96NK8 337 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 BOLA2Q9H3K6 86 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 CCDC87Q9NVE4 849 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 MYH6P13533 1939 aa8.3□□□□□ -1.08
USP39-219ENST00000496047 TESPA1A2RU30 521 aaPredicted RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 PDE8AO60658 829 aa8.29□□□□□ -1.08
USP39-219ENST00000496047 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 HMGB2P26583 209 aaKnown RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 VPS72Q15906 364 aa8.29□□□□□ -1.08
USP39-219ENST00000496047 TTC39AQ5SRH9 613 aa8.29□□□□□ -1.08
USP39-219ENST00000496047 L1TD1Q5T7N2 865 aaKnown RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP39-219ENST00000496047 KHSRPQ92945 711 aaKnown RBP eCLIP8.29□□□□□ -1.08
USP39-219ENST00000496047 ZSCAN31Q96LW9 406 aaPredicted RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 DNAJC2Q99543 621 aaKnown RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 TRMT112Q9UI30 125 aaKnown RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 ZBTB1Q9Y2K1 713 aa8.29□□□□□ -1.08
USP39-219ENST00000496047 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.29□□□□□ -1.08
USP39-219ENST00000496047 MAST2Q6P0Q8 1798 aa8.29□□□□□ -1.08
USP39-219ENST00000496047 BCL9LQ86UU0 1499 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 MED23Q9ULK4 1368 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 LOC102724428A0A0B4J2F2 783 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 SEMA3EO15041 775 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 IFIT1P09914 478 aaKnown RBP8.28□□□□□ -1.08
USP39-219ENST00000496047 CTSWP56202 376 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 SIK1P57059 783 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 MAP3K9P80192 1104 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 NMIQ13287 307 aaPredicted RBP8.28□□□□□ -1.08
USP39-219ENST00000496047 ZSCAN25Q6NSZ9 544 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 NLRP10Q86W26 655 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 KLHDC4Q8TBB5 520 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 JARID2Q92833 1246 aaPredicted RBP8.28□□□□□ -1.08
USP39-219ENST00000496047 CHMP4CQ96CF2 233 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 C8orf37Q96NL8 207 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 HAUS7Q99871 368 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 TM6SF1Q9BZW5 370 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 LSG1Q9H089 658 aaKnown RBP8.28□□□□□ -1.08
USP39-219ENST00000496047 SH2B1Q9NRF2 756 aaPredicted RBP8.28□□□□□ -1.08
USP39-219ENST00000496047 CNNM1Q9NRU3 951 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 DBNLQ9UJU6 430 aaKnown RBP8.28□□□□□ -1.08
USP39-219ENST00000496047 CYP46A1Q9Y6A2 500 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 SH3TC1Q8TE82 1336 aa8.28□□□□□ -1.08
USP39-219ENST00000496047 BRWD3Q6RI45 1802 aa8.27□□□□□ -1.09
USP39-219ENST00000496047 KIAA1551Q9HCM1 1747 aa8.27□□□□□ -1.09
USP39-219ENST00000496047 A0A1B0GUL7 405 aa8.27□□□□□ -1.09
USP39-219ENST00000496047 PSDA5PKW4 1024 aaPredicted RBP8.27□□□□□ -1.09
USP39-219ENST00000496047 IRS4O14654 1257 aaPredicted RBP8.27□□□□□ -1.09
USP39-219ENST00000496047 TBC1D12O60347 775 aa8.27□□□□□ -1.09
USP39-219ENST00000496047 ZFYP08048 801 aaPredicted RBP8.27□□□□□ -1.09
USP39-219ENST00000496047 DDIT3P35638 169 aa8.27□□□□□ -1.09
USP39-219ENST00000496047 CRKLP46109 303 aaKnown RBP8.27□□□□□ -1.09
USP39-219ENST00000496047 LSM11P83369 360 aaKnown RBP eCLIP8.27□□□□□ -1.09
USP39-219ENST00000496047 TTF1Q15361 905 aaPredicted RBP8.27□□□□□ -1.09
USP39-219ENST00000496047 METTL24Q5JXM2 366 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms