RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 METTL24Q5JXM2 366 aa18■□□□□ 0.47
PTPRE-211ENST00000495530 ANKRD2Q9GZV1 360 aa18■□□□□ 0.47
PTPRE-211ENST00000495530 GPR108Q9NPR9 543 aa18■□□□□ 0.47
PTPRE-211ENST00000495530 PASKQ96RG2 1323 aa17.99■□□□□ 0.47
PTPRE-211ENST00000495530 TMEM88BA6NKF7 163 aa17.99■□□□□ 0.47
PTPRE-211ENST00000495530 TFCP2Q12800 502 aa17.99■□□□□ 0.47
PTPRE-211ENST00000495530 SP8Q8IXZ3 490 aa17.98■□□□□ 0.47
PTPRE-211ENST00000495530 LNPKQ9C0E8 428 aa17.98■□□□□ 0.47
PTPRE-211ENST00000495530 MINPP1Q9UNW1 487 aa17.98■□□□□ 0.47
PTPRE-211ENST00000495530 SCN4AP35499 1836 aa17.98■□□□□ 0.47
PTPRE-211ENST00000495530 PPEF1O14829 653 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-211ENST00000495530 SMARCA5O60264 1052 aaPredicted RBP17.97■□□□□ 0.47
PTPRE-211ENST00000495530 PDE8BO95263 885 aa17.97■□□□□ 0.47
PTPRE-211ENST00000495530 CHRNDQ07001 517 aa17.97■□□□□ 0.47
PTPRE-211ENST00000495530 TTLL6Q8N841 843 aa17.97■□□□□ 0.47
PTPRE-211ENST00000495530 RNF39Q9H2S5 420 aa17.97■□□□□ 0.47
PTPRE-211ENST00000495530 IL1RAPL2Q9NP60 686 aa17.97■□□□□ 0.47
PTPRE-211ENST00000495530 ANKRD31Q8N7Z5 1873 aa17.97■□□□□ 0.47
PTPRE-211ENST00000495530 IFIT2P09913 472 aaKnown RBP17.96■□□□□ 0.47
PTPRE-211ENST00000495530 POTEIP0CG38 1075 aa17.96■□□□□ 0.47
PTPRE-211ENST00000495530 POTEJP0CG39 1038 aa17.96■□□□□ 0.47
PTPRE-211ENST00000495530 GRIPAP1Q4V328 841 aa17.96■□□□□ 0.47
PTPRE-211ENST00000495530 ATP6V0A2Q9Y487 856 aa17.96■□□□□ 0.47
PTPRE-211ENST00000495530 PUM3Q15397 648 aaKnown RBP17.95■□□□□ 0.46
PTPRE-211ENST00000495530 TNNI3KQ59H18 835 aa17.95■□□□□ 0.46
PTPRE-211ENST00000495530 CC2D2BQ6DHV5 1058 aa17.95■□□□□ 0.46
PTPRE-211ENST00000495530 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
PTPRE-211ENST00000495530 FPGT-TNNI3KV9GXZ4 949 aa17.95■□□□□ 0.46
PTPRE-211ENST00000495530 FER1L6Q2WGJ9 1857 aa17.95■□□□□ 0.46
PTPRE-211ENST00000495530 RASSF10A6NK89 507 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 UBE4AQ14139 1066 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 AACSQ86V21 672 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 LDHDQ86WU2 507 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 VGLL2Q8N8G2 317 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 LPIN2Q92539 896 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 GPATCH3Q96I76 525 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 NEUROD6Q96NK8 337 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 ANKIB1Q9P2G1 1089 aa17.94■□□□□ 0.46
PTPRE-211ENST00000495530 NFKBIEO00221 500 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 IFIT1P09914 478 aaKnown RBP17.93■□□□□ 0.46
PTPRE-211ENST00000495530 SLC5A1P13866 664 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 KCNJ4P48050 445 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 ATP2B3Q16720 1220 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 DEFB115Q30KQ5 88 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 PRPF40BQ6NWY9 871 aaKnown RBP17.93■□□□□ 0.46
PTPRE-211ENST00000495530 HELBQ8NG08 1087 aaPredicted RBP17.93■□□□□ 0.46
PTPRE-211ENST00000495530 EAF2Q96CJ1 260 aaPredicted RBP17.93■□□□□ 0.46
PTPRE-211ENST00000495530 BEGAINQ9BUH8 593 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 LEMD3Q9Y2U8 911 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 THSD7BQ9C0I4 1608 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 XDHP47989 1333 aa17.93■□□□□ 0.46
PTPRE-211ENST00000495530 A0A1B0GUL7 405 aa17.92■□□□□ 0.46
PTPRE-211ENST00000495530 TAF5LO75529 589 aa17.92■□□□□ 0.46
PTPRE-211ENST00000495530 ATP2B4P23634 1241 aa17.92■□□□□ 0.46
PTPRE-211ENST00000495530 TIMM10P62072 90 aa17.92■□□□□ 0.46
PTPRE-211ENST00000495530 SOGA3Q5TF21 947 aa17.92■□□□□ 0.46
PTPRE-211ENST00000495530 PODXL2Q9NZ53 605 aa17.92■□□□□ 0.46
PTPRE-211ENST00000495530 NSFL1CQ9UNZ2 370 aaKnown RBP17.92■□□□□ 0.46
PTPRE-211ENST00000495530 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
PTPRE-211ENST00000495530 IQCA1LA6NCM1 817 aa17.91■□□□□ 0.46
PTPRE-211ENST00000495530 FGFR2P21802 821 aa17.91■□□□□ 0.46
PTPRE-211ENST00000495530 GORABQ5T7V8 394 aa17.91■□□□□ 0.46
PTPRE-211ENST00000495530 MX1P20591 662 aa17.9■□□□□ 0.46
PTPRE-211ENST00000495530 CCDC158Q5M9N0 1113 aa17.9■□□□□ 0.46
PTPRE-211ENST00000495530 MPNDQ8N594 471 aa17.9■□□□□ 0.46
PTPRE-211ENST00000495530 CCDC8Q9H0W5 538 aaPredicted RBP17.9■□□□□ 0.46
PTPRE-211ENST00000495530 GGA1Q9UJY5 639 aa17.9■□□□□ 0.46
PTPRE-211ENST00000495530 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.9■□□□□ 0.46
PTPRE-211ENST00000495530 TTC41PQ6P2S7 1318 aa17.9■□□□□ 0.46
PTPRE-211ENST00000495530 TAF1P21675 1872 aa17.9■□□□□ 0.46
PTPRE-211ENST00000495530 ERC2O15083 957 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 ITGBL1O95965 494 aaPredicted RBP17.89■□□□□ 0.45
PTPRE-211ENST00000495530 PDE4AP27815 886 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 RGS3P49796 1198 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 GPSM2P81274 684 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 PLEKHM2Q8IWE5 1019 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 RTKN2Q8IZC4 609 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 C7orf43Q8WVR3 580 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 OSBPL3Q9H4L5 887 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 ECHDC1Q9NTX5 307 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 STAP2Q9UGK3 403 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 CASP8AP2Q9UKL3 1982 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 ZNF804BA4D1E1 1349 aa17.89■□□□□ 0.45
PTPRE-211ENST00000495530 PDE1AP54750 535 aa17.88■□□□□ 0.45
PTPRE-211ENST00000495530 CAVIN4Q5BKX8 364 aa17.88■□□□□ 0.45
PTPRE-211ENST00000495530 DPP8Q6V1X1 898 aaPredicted RBP17.88■□□□□ 0.45
PTPRE-211ENST00000495530 XAGE2Q96GT9 111 aa17.88■□□□□ 0.45
PTPRE-211ENST00000495530 AOX1Q06278 1338 aa17.88■□□□□ 0.45
PTPRE-211ENST00000495530 C6orf229H3BNL8 230 aa17.87■□□□□ 0.45
PTPRE-211ENST00000495530 DDNO94850 711 aaPredicted RBP17.87■□□□□ 0.45
PTPRE-211ENST00000495530 SUPT20HQ8NEM7 779 aa17.87■□□□□ 0.45
PTPRE-211ENST00000495530 DBNDD2Q9BQY9 259 aa17.87■□□□□ 0.45
PTPRE-211ENST00000495530 DBNLQ9UJU6 430 aaKnown RBP17.87■□□□□ 0.45
PTPRE-211ENST00000495530 COL11A2P13942 1736 aaPredicted RBP17.86■□□□□ 0.45
PTPRE-211ENST00000495530 C21orf2O43822 256 aa17.86■□□□□ 0.45
PTPRE-211ENST00000495530 GLRX3O76003 335 aaKnown RBP17.86■□□□□ 0.45
PTPRE-211ENST00000495530 UFL1O94874 794 aa17.86■□□□□ 0.45
PTPRE-211ENST00000495530 CCDC93Q567U6 631 aa17.86■□□□□ 0.45
PTPRE-211ENST00000495530 C15orf52Q6ZUT6 534 aaKnown RBP17.86■□□□□ 0.45
PTPRE-211ENST00000495530 VPS37DQ86XT2 251 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms