RNA–Protein interactions for RNA: ENST00000494819.5

GTF2B-207, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 893 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-207ENST00000494819 MAPK8IP3Q9UPT6 1336 aa13.07□□□□□ -0.32
GTF2B-207ENST00000494819 PTPN12Q05209 780 aaKnown RBP13.06□□□□□ -0.32
GTF2B-207ENST00000494819 OTOP1Q7RTM1 612 aa13.06□□□□□ -0.32
GTF2B-207ENST00000494819 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
GTF2B-207ENST00000494819 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
GTF2B-207ENST00000494819 TRIM17Q9Y577 477 aa13.06□□□□□ -0.32
GTF2B-207ENST00000494819 PRKG1Q13976 671 aa13.05□□□□□ -0.32
GTF2B-207ENST00000494819 MXD3Q9BW11 206 aa13.05□□□□□ -0.32
GTF2B-207ENST00000494819 ZNF646O15015 1829 aaPredicted RBP13.04□□□□□ -0.32
GTF2B-207ENST00000494819 USP17L3A6NCW0 530 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 USP17L4A6NCW7 530 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 WTIPA6NIX2 430 aaPredicted RBP13.04□□□□□ -0.32
GTF2B-207ENST00000494819 WNT10BO00744 389 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 SPRYD7Q5W111 196 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 USP17L1Q7RTZ2 530 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 BABAM1Q9NWV8 329 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 FZD1Q9UP38 647 aa13.04□□□□□ -0.32
GTF2B-207ENST00000494819 BRCA2P51587 3418 aa13.03□□□□□ -0.32
GTF2B-207ENST00000494819 RBBP6Q7Z6E9 1792 aaKnown RBP13.03□□□□□ -0.32
GTF2B-207ENST00000494819 SASH1O94885 1247 aa13.03□□□□□ -0.32
GTF2B-207ENST00000494819 EN2P19622 333 aaPredicted RBP13.03□□□□□ -0.32
GTF2B-207ENST00000494819 RIPK4P57078 832 aa13.03□□□□□ -0.32
GTF2B-207ENST00000494819 CCDC85AQ96PX6 553 aaPredicted RBP13.03□□□□□ -0.32
GTF2B-207ENST00000494819 NF2P35240 595 aa13.02□□□□□ -0.33
GTF2B-207ENST00000494819 CAP1Q01518 475 aa13.02□□□□□ -0.33
GTF2B-207ENST00000494819 DACT2Q5SW24 774 aa13.02□□□□□ -0.33
GTF2B-207ENST00000494819 LDLRAD1Q5T700 205 aa13.02□□□□□ -0.33
GTF2B-207ENST00000494819 HDGFL1Q5TGJ6 251 aa13.02□□□□□ -0.33
GTF2B-207ENST00000494819 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.33
GTF2B-207ENST00000494819 PODNQ7Z5L7 613 aa13.02□□□□□ -0.33
GTF2B-207ENST00000494819 COLQQ9Y215 455 aaPredicted RBP13.02□□□□□ -0.33
GTF2B-207ENST00000494819 XDHP47989 1333 aa13.02□□□□□ -0.33
GTF2B-207ENST00000494819 CENPFP49454 3210 aa13.01□□□□□ -0.33
GTF2B-207ENST00000494819 IGF2BP3O00425 579 aaKnown RBP eCLIP13.01□□□□□ -0.33
GTF2B-207ENST00000494819 TRIM28Q13263 835 aaKnown RBP13.01□□□□□ -0.33
GTF2B-207ENST00000494819 ARMC9Q7Z3E5 817 aa13.01□□□□□ -0.33
GTF2B-207ENST00000494819 IFNL1Q8IU54 200 aa13.01□□□□□ -0.33
GTF2B-207ENST00000494819 ZBTB38Q8NAP3 1195 aaPredicted RBP13.01□□□□□ -0.33
GTF2B-207ENST00000494819 CD99L2Q8TCZ2 262 aa13.01□□□□□ -0.33
GTF2B-207ENST00000494819 ANGEL1Q9UNK9 670 aaKnown RBP13.01□□□□□ -0.33
GTF2B-207ENST00000494819 PTPN22Q9Y2R2 807 aa13.01□□□□□ -0.33
GTF2B-207ENST00000494819 SSC5DA1L4H1 1573 aa13.01□□□□□ -0.33
GTF2B-207ENST00000494819 MED23Q9ULK4 1368 aa13□□□□□ -0.33
GTF2B-207ENST00000494819 ALDH1A1P00352 501 aa13□□□□□ -0.33
GTF2B-207ENST00000494819 ATP2B4P23634 1241 aa13□□□□□ -0.33
GTF2B-207ENST00000494819 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
GTF2B-207ENST00000494819 JARID2Q92833 1246 aaPredicted RBP13□□□□□ -0.33
GTF2B-207ENST00000494819 FBXW7Q969H0 707 aa13□□□□□ -0.33
GTF2B-207ENST00000494819 ARMC5Q96C12 935 aa13□□□□□ -0.33
GTF2B-207ENST00000494819 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
GTF2B-207ENST00000494819 MANSC4A6NHS7 340 aaPredicted RBP12.99□□□□□ -0.33
GTF2B-207ENST00000494819 CHL1O00533 1208 aa12.99□□□□□ -0.33
GTF2B-207ENST00000494819 CCDC152Q4G0S7 254 aa12.99□□□□□ -0.33
GTF2B-207ENST00000494819 CLMNQ96JQ2 1002 aa12.99□□□□□ -0.33
GTF2B-207ENST00000494819 PNNQ9H307 717 aaKnown RBP12.99□□□□□ -0.33
GTF2B-207ENST00000494819 DBF4Q9UBU7 674 aaPredicted RBP12.99□□□□□ -0.33
GTF2B-207ENST00000494819 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
GTF2B-207ENST00000494819 CHRDL2Q6WN34 429 aa12.98□□□□□ -0.33
GTF2B-207ENST00000494819 APOBEC3FQ8IUX4 373 aaKnown RBP12.98□□□□□ -0.33
GTF2B-207ENST00000494819 ANKRD18AQ8IVF6 992 aa12.98□□□□□ -0.33
GTF2B-207ENST00000494819 OGFOD1Q8N543 542 aa12.98□□□□□ -0.33
GTF2B-207ENST00000494819 ERO1AQ96HE7 468 aa12.98□□□□□ -0.33
GTF2B-207ENST00000494819 ZBED3Q96IU2 234 aaPredicted RBP12.98□□□□□ -0.33
GTF2B-207ENST00000494819 WNK4Q96J92 1243 aa12.98□□□□□ -0.33
GTF2B-207ENST00000494819 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
GTF2B-207ENST00000494819 MYO3BQ8WXR4 1341 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 PDE8AO60658 829 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 HOXB7P09629 217 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 GJA5P36382 358 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 MNX1P50219 401 aaPredicted RBP12.97□□□□□ -0.33
GTF2B-207ENST00000494819 CRHR2Q13324 411 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 MAP3K11Q16584 847 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 STRIP1Q5VSL9 837 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 TXNRD3Q86VQ6 643 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 MYD88Q99836 296 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 LAS1LQ9Y4W2 734 aaKnown RBP12.97□□□□□ -0.33
GTF2B-207ENST00000494819 COL1A1P02452 1464 aaPredicted RBP12.97□□□□□ -0.33
GTF2B-207ENST00000494819 LAMB1P07942 1786 aa12.97□□□□□ -0.33
GTF2B-207ENST00000494819 PCCAP05165 728 aaPredicted RBP12.96□□□□□ -0.33
GTF2B-207ENST00000494819 ZBTB48P10074 688 aaPredicted RBP12.96□□□□□ -0.33
GTF2B-207ENST00000494819 INHBEP58166 350 aa12.96□□□□□ -0.33
GTF2B-207ENST00000494819 RIC3Q7Z5B4 369 aa12.96□□□□□ -0.33
GTF2B-207ENST00000494819 KIAA0825Q8IV33 1275 aa12.96□□□□□ -0.33
GTF2B-207ENST00000494819 SLC10A4Q96EP9 437 aa12.96□□□□□ -0.33
GTF2B-207ENST00000494819 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
GTF2B-207ENST00000494819 PHAXQ9H814 394 aaKnown RBP12.96□□□□□ -0.33
GTF2B-207ENST00000494819 EFCC1Q9HA90 598 aa12.96□□□□□ -0.33
GTF2B-207ENST00000494819 HYPKQ9NX55 129 aa12.96□□□□□ -0.33
GTF2B-207ENST00000494819 ECM2O94769 699 aaPredicted RBP12.95□□□□□ -0.34
GTF2B-207ENST00000494819 KLRK1P26718 216 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 CCT4P50991 539 aaKnown RBP12.95□□□□□ -0.34
GTF2B-207ENST00000494819 NEUROD2Q15784 382 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 OTUD5Q96G74 571 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 PTPN18Q99952 460 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 DEFB129Q9H1M3 183 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 MINPP1Q9UNW1 487 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 TRIM35Q9UPQ4 493 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
GTF2B-207ENST00000494819 HSP90B1P14625 803 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms